FFCP PHASE1:Hg19::chr7:150329365..150329386,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr7:150329365..150329386,- to FFCP PHASE1:Hg19::chr7:150329365..150329386,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=474344 | |EntrezGene=474344 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21918 | |HGNC=21918 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000392862_5end | |||
|cluster_id=chr7:150329365..150329386,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_4_at_GIMAP6_5end | |||
|id=chr7:150329365..150329386,- | |||
|ontology_enrichment_celltype=CL:0002139!1.65e-20!24;CL:0000115!2.60e-17!35;CL:0000791!4.02e-17!18;CL:0000789!4.02e-17!18;CL:0002420!4.02e-17!18;CL:0002419!4.02e-17!18;CL:0000790!4.02e-17!18;CL:0000071!1.69e-16!18;CL:0002546!1.69e-16!18;CL:0000084!1.66e-12!25;CL:0000827!1.66e-12!25;CL:0002078!2.16e-12!44;CL:0000625!1.57e-11!11;CL:1000413!5.65e-09!9;CL:0002087!2.30e-08!119;CL:0000213!2.16e-07!57;CL:0000215!2.16e-07!57;CL:0000624!4.01e-07!6;CL:0000738!5.99e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.17e-30;24!CL:0000071;1.97e-25;18!CL:0000791;6.33e-23;18!CL:0000789;6.33e-23;18!CL:0002419;6.33e-23;18!CL:0000115;5.16e-21;36!CL:0000625;7.49e-16;11!CL:0000084;4.46e-15;25!CL:1000413;2.20e-13;9!CL:0002078;2.15e-12;45!CL:0000624;2.26e-10;6!CL:0002543;9.25e-10;6!CL:0002544;1.11e-09;6!CL:0000213;1.43e-08;58!CL:0000215;1.43e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.61e-30,24;CL:0000071,7.16e-26,18;CL:0002546,7.16e-26,18;CL:0000115,1.40e-25,36;CL:0000791,4.55e-23,18;CL:0000789,4.55e-23,18;CL:0002420,4.55e-23,18;CL:0002419,4.55e-23,18;CL:0000790,4.55e-23,18;CL:0002078,8.64e-19,45;CL:0000625,8.97e-16,11;CL:0000084,3.56e-15,25;CL:0000827,3.56e-15,25;CL:1000413,1.28e-13,9;CL:0000213,8.26e-13,58;CL:0000215,8.26e-13,58;CL:0000624,1.29e-10,6;CL:0002544,6.48e-10,6;CL:0002543,6.80e-10,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.97e-25;18!CL:0000790;6.33e-23;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.15e-45!115;UBERON:0001986!1.69e-16!18;UBERON:0004638!1.69e-16!18;UBERON:0004852!1.69e-16!18;UBERON:0000487!3.13e-12!22;UBERON:0006914!6.64e-11!25;UBERON:0000178!4.29e-09!15;UBERON:0000179!4.29e-09!15;UBERON:0000463!4.29e-09!15;UBERON:0003915!5.65e-09!9;UBERON:0004700!5.65e-09!9;UBERON:0001917!5.65e-09!9;UBERON:0002193!5.99e-09!112;UBERON:0001049!1.06e-08!57;UBERON:0005068!1.06e-08!57;UBERON:0006241!1.06e-08!57;UBERON:0007135!1.06e-08!57;UBERON:0003080!1.86e-07!42;UBERON:0001009!2.98e-07!113;UBERON:0002780!5.63e-07!41;UBERON:0001890!5.63e-07!41;UBERON:0006240!5.63e-07!41;UBERON:0002616!6.74e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.97e-25;18!UBERON:0001986;1.97e-25;18!UBERON:0004852;1.97e-25;18!UBERON:0000487;8.36e-20;22!UBERON:0006914;8.80e-17;25!UBERON:0000178;1.19e-14;15!UBERON:0000179;1.19e-14;15!UBERON:0000463;1.19e-14;15!UBERON:0003915;2.20e-13;9!UBERON:0004700;2.20e-13;9!UBERON:0001917;2.20e-13;9!UBERON:0000490;1.25e-10;33!UBERON:0002193;2.65e-09;42!UBERON:0001638;2.04e-08;9!UBERON:0003920;2.04e-08;9!UBERON:0004582;2.04e-08;9!UBERON:0002390;3.07e-07;32!UBERON:0002465;5.28e-07;10!UBERON:0001009;9.06e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,7.16e-26,18;UBERON:0001986,7.16e-26,18;UBERON:0004852,7.16e-26,18;UBERON:0000487,3.74e-20,22;UBERON:0006914,4.40e-17,25;UBERON:0007023,5.65e-17,114;UBERON:0001009,4.64e-16,112;UBERON:0004535,6.03e-15,109;UBERON:0000178,9.34e-15,15;UBERON:0000179,9.34e-15,15;UBERON:0000463,9.34e-15,15;UBERON:0003915,1.28e-13,9;UBERON:0004700,1.28e-13,9;UBERON:0001917,1.28e-13,9;UBERON:0000055,4.23e-11,68;UBERON:0002049,1.01e-08,78;UBERON:0007798,1.01e-08,78;UBERON:0007500,1.06e-08,59;UBERON:0001981,1.06e-08,59;UBERON:0004537,1.06e-08,59;UBERON:0006965,1.06e-08,59;UBERON:0001638,1.60e-08,9;UBERON:0003920,1.60e-08,9;UBERON:0004582,1.60e-08,9;UBERON:0004872,3.35e-07,83;UBERON:0002465,6.18e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.18009283054671,1.15148819429164,0.154816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,1.00272223735071,0.217010870715852,0,0.32389366601898,0.257575567634187,0.436194716338694,1.13362783106643,0.727752183563449,0.232429036905685,0.411167888021826,0,0.575384784644301,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0.224723484445085,0,0,0,0.329851300186716,0.398927315243264,1.27867425159808,0,0,0,0.502497330513487,0,0.65156653411535,0,0.736555271975129,0,0.422510572623884,0.850417199860174,0.419317291016752,0.336985893439485,0.450530678524519,0.32145117339416,0,0.99458338599545,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75393678159366,1.96505381374582,4.93443597598822,1.5046784585161,19.5553359980154,17.9910166179199,29.2240092611867,2.33961959458865,7.36514768687093,12.4058980966828,7.31170432165542,1.0247305578054,1.1705341280389,9.04408475320219,6.07970039128866,6.0858648004361,9.34205347920981,10.1665514674091,15.6803285707465,4.87230173599535,3.83220493601921,6.52892146416997,8.09663014462409,14.0168782302603,14.9749194386976,15.207232711174,12.3471597643774,13.0546343377507,13.742379920758,11.3653080981128,9.03240796613151,1.41124720257313,0.267440195783507,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0,1.70272798147026,0,0,0.324547393654683,0,0,0,0,0.371457501329565,2.98143611050058,1.72046919021225,2.77712401286075,5.08777147731609,2.51699661725944,2.47606237746061,1.46296476575767,1.03366703667732,2.13459757612026,3.01248551488203,2.81980521976403,1.52054421143703,4.14905497831888,3.67663080345869,2.43042584364528,3.30408994651095,4.04152870727106,2.81528701208306,1.53316637465883,2.84779697870439,3.66403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42893272774789,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,1.29929802984966,0.462985512576611,2.85381228351897,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.985153801009636,0.862510299438069,1.54011643535698,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,1.72571360654893,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70093705276516,1.51141141271498,1.54227252690289,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,1.34060455107157,0,0.847294206991012,0,0,0,0,3.04468565539302,3.0585488285695,6.26611905891579,7.38518503919146,7.81588318863769,3.24236655596359,7.56044012133361,4.75875105776562,0,0,0,0,0,0,0.159426272728822,0,0.383010740264733,0.635020748171649,0,0,0,0,0,0.50787533340481,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,3.36968812325356,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.597743964753209,1.93398740871803,0,0,0,0,0,0,0,0.493217028184668,4.7896618469388,0,1.93866549219044,0.556608588971108,1.99613798001194,0,0,1.44999915086959,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0.591095237907095,0.658156191461918,0,0,1.61595542857974,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0.876214728748802,1.60515529459758,1.1713222286267,0,0,0,0.789168805698781,0,1.22429104652196,2.0851571277401,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,1.26621591911757,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,1.95497680890578,3.20824593616357,3.58936512288407,0.199679000498991,1.71690419254628,1.33902874465124,1.20930250476107,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.728994679896296,0,1.02447419488958,0.577000469484979,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0.258565912723101,1.05786081394152,0,0,2.77647272676006,2.82967749179399,4.97086866416635,7.44249032717926,0,0,0,0,0.7520696820681,0.306345576763462,0,0,0,0.366078794705889,0.751145584238999,0,0.887432412294818,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28458450192919,0,0,1.64093091392604,0.252071696221718,1.24483054435592,0.645902582527404,0,0,0,0,0,0,0,0,0.526472298444801,0,1.56302802246618,0,0,0,0.540300676947157,0,0.206686796501184,1.01465296310251,0,0.548257766857182,3.47347824872506,0,0,0,0,0.606965604236632,0.227662191351298,0.443511850813194,0.230467975111559,0,1.42736439251347,1.24968269769413,0,0,1.02041020705668,0.157115589916002,0,0,0,0,1.35805433935647,0,0,0,0,0,0,0,0.430227358820278,0,0,1.27016115057279,0,0,0,0,0,0,0,0.615976841137482,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.848915739187391,0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| ||
|short_description=p4@GIMAP6 | |||
}} | }} |
Latest revision as of 03:34, 17 September 2015
Short description: | p4@GIMAP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GIMAP6_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000392862_5end |
EntrezGene: | GIMAP6 |
HGNC: | 21918 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.61e-30 | 24 |
blood vessel endothelial cell | 7.16e-26 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.16e-26 | 18 |
endothelial cell | 1.40e-25 | 36 |
mature alpha-beta T cell | 4.55e-23 | 18 |
alpha-beta T cell | 4.55e-23 | 18 |
immature T cell | 4.55e-23 | 18 |
mature T cell | 4.55e-23 | 18 |
immature alpha-beta T cell | 4.55e-23 | 18 |
meso-epithelial cell | 8.64e-19 | 45 |
CD8-positive, alpha-beta T cell | 8.97e-16 | 11 |
T cell | 3.56e-15 | 25 |
pro-T cell | 3.56e-15 | 25 |
endothelial cell of artery | 1.28e-13 | 9 |
lining cell | 8.26e-13 | 58 |
barrier cell | 8.26e-13 | 58 |
CD4-positive, alpha-beta T cell | 1.29e-10 | 6 |
aortic endothelial cell | 6.48e-10 | 6 |
vein endothelial cell | 6.80e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 7.16e-26 | 18 |
endothelium | 7.16e-26 | 18 |
cardiovascular system endothelium | 7.16e-26 | 18 |
simple squamous epithelium | 3.74e-20 | 22 |
squamous epithelium | 4.40e-17 | 25 |
adult organism | 5.65e-17 | 114 |
circulatory system | 4.64e-16 | 112 |
cardiovascular system | 6.03e-15 | 109 |
blood | 9.34e-15 | 15 |
haemolymphatic fluid | 9.34e-15 | 15 |
organism substance | 9.34e-15 | 15 |
endothelial tube | 1.28e-13 | 9 |
arterial system endothelium | 1.28e-13 | 9 |
endothelium of artery | 1.28e-13 | 9 |
vessel | 4.23e-11 | 68 |
vasculature | 1.01e-08 | 78 |
vascular system | 1.01e-08 | 78 |
epithelial tube open at both ends | 1.06e-08 | 59 |
blood vessel | 1.06e-08 | 59 |
blood vasculature | 1.06e-08 | 59 |
vascular cord | 1.06e-08 | 59 |
vein | 1.60e-08 | 9 |
venous blood vessel | 1.60e-08 | 9 |
venous system | 1.60e-08 | 9 |
splanchnic layer of lateral plate mesoderm | 3.35e-07 | 83 |
lymphoid system | 6.18e-07 | 10 |