FFCP PHASE1:Hg19::chr15:33023069..33023091,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=26585 | |EntrezGene=26585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=2001 | |HGNC=2001 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=O60565 | |UniProt=O60565 | ||
|association_with_transcript=177bp_to_AF045800,BC069525,CU686886,HQ448400_5end | |association_with_transcript=177bp_to_AF045800,BC069525,CU686886,HQ448400_5end | ||
|cluster_id=chr15:33023069..33023091,+ | |||
|coexpression_cluster_id=C316 | |coexpression_cluster_id=C316 | ||
|description=CAGE_peak_5_at_GREM1_5end | |description=CAGE_peak_5_at_GREM1_5end | ||
Latest revision as of 04:33, 17 September 2015
| Short description: | p5@GREM1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_GREM1_5end |
| Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
| Association with transcript: | 177bp_to_AF045800, BC069525, CU686886, HQ448400_5end |
| EntrezGene: | GREM1 |
| HGNC: | 2001 |
| UniProt: | O60565 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@GREM1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 1.45e-26 | 76 |
| skin fibroblast | 5.35e-22 | 23 |
| multi fate stem cell | 1.05e-16 | 427 |
| somatic stem cell | 3.98e-16 | 433 |
| stem cell | 2.21e-15 | 441 |
| connective tissue cell | 3.21e-11 | 361 |
| preadipocyte | 4.14e-11 | 12 |
| mesenchymal cell | 1.16e-10 | 354 |
| hair follicle cell | 1.11e-09 | 5 |
| motile cell | 1.39e-08 | 386 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| integument | 2.52e-22 | 46 |
| integumental system | 2.52e-22 | 46 |
| skin of body | 7.56e-20 | 41 |
| surface structure | 3.96e-14 | 99 |
| connective tissue | 4.37e-12 | 371 |
| dense mesenchyme tissue | 6.29e-11 | 73 |
| somite | 2.16e-10 | 71 |
| presomitic mesoderm | 2.16e-10 | 71 |
| presumptive segmental plate | 2.16e-10 | 71 |
| dermomyotome | 2.16e-10 | 71 |
Showing 1 to 10 of 28 entries
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system disease | 3.54e-09 | 5 |
| myotonic disease | 3.54e-09 | 5 |
| muscle tissue disease | 3.54e-09 | 5 |
| myopathy | 3.54e-09 | 5 |
| muscular disease | 3.54e-09 | 5 |
| myotonic dystrophy | 3.54e-09 | 5 |
Showing 1 to 6 of 6 entries
