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FFCP PHASE1:Hg19::chr15:33024736..33024758,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=26585
|EntrezGene=26585
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=2001
|HGNC=2001
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_AL359059_5end
|association_with_transcript=0bp_to_AL359059_5end
|cluster_id=chr15:33024736..33024758,+
|coexpression_cluster_id=C316
|coexpression_cluster_id=C316
|description=CAGE_peak_10_at_GREM1_5end
|description=CAGE_peak_10_at_GREM1_5end
Line 9: Line 14:
|ontology_enrichment_celltype=CL:0000055!1.95e-30!180;CL:0000057!4.80e-25!75;CL:0000048!4.77e-18!430;CL:0000723!3.25e-17!436;CL:0000034!3.82e-16!444;CL:0002620!9.70e-16!23;CL:0000680!2.02e-14!57;CL:0000056!2.02e-14!57;CL:0000355!2.02e-14!57;CL:0002334!1.36e-13!12;CL:0000192!4.73e-13!42;CL:0000514!4.73e-13!42;CL:0000359!1.77e-12!32;CL:0000187!1.77e-12!54;CL:0000393!4.52e-11!60;CL:0000211!4.52e-11!60;CL:0000183!1.46e-10!59;CL:0002371!2.91e-10!591;CL:0002320!2.90e-09!365;CL:0000144!1.59e-08!625;CL:0000134!3.86e-08!358;CL:0002539!4.20e-07!10
|ontology_enrichment_celltype=CL:0000055!1.95e-30!180;CL:0000057!4.80e-25!75;CL:0000048!4.77e-18!430;CL:0000723!3.25e-17!436;CL:0000034!3.82e-16!444;CL:0002620!9.70e-16!23;CL:0000680!2.02e-14!57;CL:0000056!2.02e-14!57;CL:0000355!2.02e-14!57;CL:0002334!1.36e-13!12;CL:0000192!4.73e-13!42;CL:0000514!4.73e-13!42;CL:0000359!1.77e-12!32;CL:0000187!1.77e-12!54;CL:0000393!4.52e-11!60;CL:0000211!4.52e-11!60;CL:0000183!1.46e-10!59;CL:0002371!2.91e-10!591;CL:0002320!2.90e-09!365;CL:0000144!1.59e-08!625;CL:0000134!3.86e-08!358;CL:0002539!4.20e-07!10
|ontology_enrichment_celltype_v019=CL:0002334;1.98e-20;12!CL:0002620;1.71e-15;23!CL:0000057;1.33e-08;73!CL:0002539;5.61e-08;10!CL:0000135;6.68e-08;3!CL:0000388;6.68e-08;3!CL:0002579;8.94e-08;3!CL:0002580;1.61e-07;3!CL:0002615;3.62e-07;3!CL:0002320;4.81e-07;188!CL:0000499;7.68e-07;28
|ontology_enrichment_celltype_v019=CL:0002334;1.98e-20;12!CL:0002620;1.71e-15;23!CL:0000057;1.33e-08;73!CL:0002539;5.61e-08;10!CL:0000135;6.68e-08;3!CL:0000388;6.68e-08;3!CL:0002579;8.94e-08;3!CL:0002580;1.61e-07;3!CL:0002615;3.62e-07;3!CL:0002320;4.81e-07;188!CL:0000499;7.68e-07;28
|ontology_enrichment_celltype_v019_2=CL:0000057,1.05e-27,76;CL:0002334,1.92e-20,12;CL:0002620,1.31e-15,23;CL:0000048,3.04e-14,427;CL:0000723,9.07e-14,433;CL:0000034,3.71e-13,441;CL:0000134,7.59e-11,354;CL:0002320,2.56e-10,361;CL:0000219,5.45e-09,386;CL:0000136,3.75e-08,15;CL:0002539,5.51e-08,10;CL:0000135,7.41e-08,3;CL:0000388,7.41e-08,3;CL:0002579,8.86e-08,3;CL:0002580,1.48e-07,3;CL:0002615,4.93e-07,3;CL:0000499,8.80e-07,28
|ontology_enrichment_development_v019=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:2394!2.78e-09!14;DOID:17!6.33e-07!5;DOID:450!6.33e-07!5;DOID:66!6.33e-07!5;DOID:423!6.33e-07!5;DOID:0080000!6.33e-07!5;DOID:11722!6.33e-07!5
|ontology_enrichment_disease=DOID:2394!2.78e-09!14;DOID:17!6.33e-07!5;DOID:450!6.33e-07!5;DOID:66!6.33e-07!5;DOID:423!6.33e-07!5;DOID:0080000!6.33e-07!5;DOID:11722!6.33e-07!5
|ontology_enrichment_disease_v019=DOID:17;1.80e-11;5!DOID:450;1.80e-11;5!DOID:66;1.80e-11;5!DOID:423;1.80e-11;5!DOID:0080000;1.80e-11;5!DOID:11722;1.80e-11;5
|ontology_enrichment_disease_v019=DOID:17;1.80e-11;5!DOID:450;1.80e-11;5!DOID:66;1.80e-11;5!DOID:423;1.80e-11;5!DOID:0080000;1.80e-11;5!DOID:11722;1.80e-11;5
|ontology_enrichment_disease_v019_2=DOID:17,1.62e-11,5;DOID:450,1.62e-11,5;DOID:66,1.62e-11,5;DOID:423,1.62e-11,5;DOID:0080000,1.62e-11,5;DOID:11722,1.62e-11,5
|ontology_enrichment_uberon=UBERON:0000914!2.01e-19!83;UBERON:0002329!2.01e-19!83;UBERON:0003077!2.01e-19!83;UBERON:0003059!2.01e-19!83;UBERON:0007282!2.01e-19!83;UBERON:0009618!2.01e-19!83;UBERON:0007285!2.01e-19!83;UBERON:0004290!7.09e-16!70;UBERON:0000486!3.94e-14!82;UBERON:0001134!1.01e-12!61;UBERON:0002036!1.01e-12!61;UBERON:0003082!1.01e-12!61;UBERON:0002385!5.77e-12!63;UBERON:0001015!5.77e-12!63;UBERON:0000383!5.77e-12!63;UBERON:0002199!8.44e-12!45;UBERON:0002416!8.44e-12!45;UBERON:0002097!9.78e-12!40;UBERON:0005256!2.56e-11!143;UBERON:0002384!2.70e-10!375;UBERON:0003102!5.41e-10!95;UBERON:0004573!6.42e-09!33;UBERON:0004571!6.42e-09!33;UBERON:0001637!4.28e-08!42;UBERON:0003509!4.28e-08!42;UBERON:0004572!4.28e-08!42;UBERON:0002100!4.93e-08!216;UBERON:0003688!8.34e-08!6;UBERON:0002358!8.34e-08!6;UBERON:0003684!8.34e-08!6;UBERON:0001178!8.34e-08!6;UBERON:0001135!9.03e-08!15;UBERON:0000475!2.34e-07!365;UBERON:0004237!4.20e-07!10;UBERON:0004695!4.20e-07!10;UBERON:0002111!4.20e-07!10;UBERON:0004178!4.20e-07!10;UBERON:0004457!9.03e-07!12;UBERON:0000042!9.03e-07!12
|ontology_enrichment_uberon=UBERON:0000914!2.01e-19!83;UBERON:0002329!2.01e-19!83;UBERON:0003077!2.01e-19!83;UBERON:0003059!2.01e-19!83;UBERON:0007282!2.01e-19!83;UBERON:0009618!2.01e-19!83;UBERON:0007285!2.01e-19!83;UBERON:0004290!7.09e-16!70;UBERON:0000486!3.94e-14!82;UBERON:0001134!1.01e-12!61;UBERON:0002036!1.01e-12!61;UBERON:0003082!1.01e-12!61;UBERON:0002385!5.77e-12!63;UBERON:0001015!5.77e-12!63;UBERON:0000383!5.77e-12!63;UBERON:0002199!8.44e-12!45;UBERON:0002416!8.44e-12!45;UBERON:0002097!9.78e-12!40;UBERON:0005256!2.56e-11!143;UBERON:0002384!2.70e-10!375;UBERON:0003102!5.41e-10!95;UBERON:0004573!6.42e-09!33;UBERON:0004571!6.42e-09!33;UBERON:0001637!4.28e-08!42;UBERON:0003509!4.28e-08!42;UBERON:0004572!4.28e-08!42;UBERON:0002100!4.93e-08!216;UBERON:0003688!8.34e-08!6;UBERON:0002358!8.34e-08!6;UBERON:0003684!8.34e-08!6;UBERON:0001178!8.34e-08!6;UBERON:0001135!9.03e-08!15;UBERON:0000475!2.34e-07!365;UBERON:0004237!4.20e-07!10;UBERON:0004695!4.20e-07!10;UBERON:0002111!4.20e-07!10;UBERON:0004178!4.20e-07!10;UBERON:0004457!9.03e-07!12;UBERON:0000042!9.03e-07!12
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|ontology_enrichment_uberon_v019=UBERON:0004457;3.05e-14;9!UBERON:0000042;3.05e-14;9!UBERON:0003688;2.83e-13;6!UBERON:0002358;2.83e-13;6!UBERON:0003684;2.83e-13;6!UBERON:0001178;2.83e-13;6!UBERON:0002097;2.11e-10;41!UBERON:0002199;4.88e-09;46!UBERON:0002416;4.88e-09;46!UBERON:0001135;3.09e-08;15!UBERON:0004237;5.61e-08;10!UBERON:0004695;5.61e-08;10!UBERON:0002111;5.61e-08;10!UBERON:0004178;5.61e-08;10!UBERON:0007846;6.68e-08;3!UBERON:0000043;6.68e-08;3!UBERON:0007845;6.68e-08;3!UBERON:0002384;9.41e-08;198!UBERON:0003102;4.17e-07;50
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|short_description=p10@GREM1
|short_description=p10@GREM1
}}
}}

Latest revision as of 04:52, 17 September 2015

Short description:p10@GREM1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_10_at_GREM1_5end
Coexpression cluster:C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing
Association with transcript: 0bp_to_AL359059_5end
EntrezGene:GREM1
HGNC: 2001
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data