FFCP PHASE1:Hg19::chr1:153538047..153538062,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6273 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10492 | |||
|TSSclassifier=strong | |||
|UniProt=Q5RHS7 | |||
|association_with_transcript=-29bp_to_ENST00000368707_5end | |||
|cluster_id=chr1:153538047..153538062,- | |||
|coexpression_cluster_id=C688 | |||
|description=CAGE_peak_2_at_S100A2_5end | |||
|id=chr1:153538047..153538062,- | |||
|ontology_enrichment_celltype=CL:0000066!2.24e-28!254;CL:0002076!1.65e-17!43;CL:0000223!4.22e-14!59;CL:0000220!1.17e-13!246;CL:0002321!3.62e-13!248;CL:0002368!2.32e-10!13;CL:0000076!4.17e-08!62;CL:0002202!1.34e-07!9;CL:0002632!1.34e-07!9;CL:0000548!2.75e-07!679;CL:0000004!2.75e-07!679;CL:0000255!2.75e-07!679;CL:0000012!7.31e-07!682;CL:0000035!7.59e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.46e-17;42!CL:0002368;3.53e-14;13!CL:0002202;3.25e-10;9!CL:0002632;3.25e-10;9!CL:0002159;1.23e-07;14!CL:0002251;1.85e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.72e-29,253;CL:0002076,4.61e-24,42;CL:0000223,3.86e-19,58;CL:0002368,3.28e-14,13;CL:0002321,5.61e-12,250;CL:0002202,3.00e-10,9;CL:0002632,3.00e-10,9;CL:0000076,7.14e-09,63;CL:0002159,1.24e-07,14;CL:0002251,1.89e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;5.47e-10;58 | |||
|ontology_enrichment_disease=DOID:305!3.99e-11!106;DOID:1749!5.42e-10!14;DOID:0050687!1.44e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.01e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.11e-13,14;DOID:305,4.63e-09,106;DOID:0050687,3.28e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.93e-14!169;UBERON:0000925!3.93e-14!169;UBERON:0006595!3.93e-14!169;UBERON:0001004!7.31e-13!72;UBERON:0003104!6.14e-12!238;UBERON:0009142!6.14e-12!238;UBERON:0000161!7.72e-11!35;UBERON:0003102!1.79e-10!95;UBERON:0001007!4.33e-10!155;UBERON:0001555!4.33e-10!155;UBERON:0007026!4.33e-10!155;UBERON:0001444!1.26e-09!48;UBERON:0000481!1.94e-09!347;UBERON:0000165!4.34e-09!28;UBERON:0000930!4.34e-09!28;UBERON:0000166!7.67e-09!21;UBERON:0000065!2.20e-08!53;UBERON:0000077!2.98e-08!130;UBERON:0001008!3.58e-08!45;UBERON:0000475!3.78e-08!365;UBERON:0006554!6.18e-08!44;UBERON:0000072!3.46e-07!46;UBERON:0002100!6.34e-07!216;UBERON:0000464!7.72e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;4.54e-10;28!UBERON:0000161;1.17e-09;19!UBERON:0000166;1.17e-09;19!UBERON:0006554;4.88e-08;30!UBERON:0001008;4.88e-08;30!UBERON:0007196;1.20e-07;15!UBERON:0001558;1.20e-07;15!UBERON:0005910;1.64e-07;6!UBERON:0000486;3.15e-07;12!UBERON:0005911;7.24e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.37e-12,74;UBERON:0004119,1.05e-11,160;UBERON:0000925,1.05e-11,160;UBERON:0006595,1.05e-11,160;UBERON:0000161,1.80e-11,36;UBERON:0000153,9.40e-11,62;UBERON:0007811,9.40e-11,62;UBERON:0000033,1.49e-10,56;UBERON:0000166,1.65e-10,22;UBERON:0000165,2.14e-09,29;UBERON:0000930,2.14e-09,29;UBERON:0001444,2.60e-09,49;UBERON:0001008,6.53e-08,48;UBERON:0000065,7.74e-08,54;UBERON:0001007,9.75e-08,145;UBERON:0001555,9.75e-08,145;UBERON:0007026,9.75e-08,145;UBERON:0007196,1.14e-07,15;UBERON:0001558,1.14e-07,15;UBERON:0003102,1.28e-07,99;UBERON:0006554,1.32e-07,47;UBERON:0005910,1.66e-07,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,2.45733936501509,33.4944560626765,0.873765488520689,1.31883489114227,3.7129905888014,2.98257638155124,0,0,0.730310090387373,0,1.23121058076788,1.63200552995402,1.88072832886853,1.43117993565528,1.91624195102038,0.753255837568817,0,0.0821005894499457,0,0,0,0.77408061658038,1394.76199753453,1047.59418551075,437.41899402731,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0,0.512321413058201,0.47296445977717,0,0,0,0,0,0,0,0,0.639337125799041,0,0.199463657621632,0.852449501065388,0,0.56738522469114,0,0,0,0.217188844705117,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0.50133791063589,0.579386075843295,0.795285947051099,0.973269740605272,1.98523116044542,2.66075276955077,1.14185221401064,3.33996642519167,446.990318734949,779.018114290086,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.626984899610432,0,0,0,0,0,1.22031028774085,0,0,0.0892997282840798,0,0,0,0,0,0,0,343.642113088317,0.496971951695318,0.886413581652058,0,0,1.06400514659507,6.16745360156538,0,4.19334832309172,0.622422070799533,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,15.4027391817001,0,0.469737994575059,0.485618833104395,0.702254033511242,0,2.33385202892359,0.103325781175765,0,0.741800787835671,0,0,1.17835279767846,1.00094815897571,0,0.438977620880838,0.919463387397059,0.300476117813194,0.226864366320042,0.179389635688862,0,0,0,0.721367704669072,0.515281080091258,0.18611685633159,0.337552664482532,0.68205903612839,0.757301322732344,0.276149695926898,0,0,0.403008392910561,0.67824236924195,536.685389234475,438.03026966888,393.495904873713,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,1.0647612003586,1.51726221070292,0.482022059766964,0.772057809126758,0,0.949082476444386,1.48314438976181,0.98110732562673,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,1.02940686179115,526.911120246811,345.073382500892,536.824712678109,384.982754969166,0.325808305310325,0,0,0.34779121492523,0.234817388471643,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0,0,870.787317737158,362.505432653139,550.370927494944,373.996390807094,531.278839603522,573.157105351991,0,0,0,0,0,0.571481048629521,0,0,17.1072446022705,0,0,0,0,0,0.36669142910475,0,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,1.8649552531127,0,0,1.64648067356154,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0.718874566474748,2.29723871668228,4.27910715122155,0.868687840005475,1.02738161275192,0.895304816199478,0,0,0,0,0,0,2.31986643833309,0.502548796003046,3.82763250991898,0,0,0,0.981531933753119,1.50051156317903,1.89885516589815,0.831883446123229,1.24900292158013,1.10391690523754,0.819989904948992,0.601892199455438,4.5481500811197,5.17365356462525,2.65690239414175,3.13427586520895,0.347534457872331,0.195801157462741,0.686286847621712,0,0,0,0.606255142892519,3.32870879020994,1.81434175997808,0.248107807818777,0,0.841980283299221,0,0.511707249066704,0,0,0.771048469013278,0.532685175939381,0.9033987161519,0,0.464841513839837,0.120859449591622,621.570057940183,136.832349558742,0.34444334449382,0.182091168006717,2.22911505431021,0.451199612907412,0.231046011313244,1.56869953835371,1.46139224653261,0.422206515571503,1.13733384070897,0.510281115829547,14.8981982110476,6.16909010761157,4.06419656315779,7.02365683396795,0,0.831076008928724,5.82074362277664,0,0,1.02580050046556,1.31205858279882,1.30151357865721,0.618246069886334,4.30376484646214,4.1254749960294,151.606102030989,477.794280836843,0,4.25351160485337,0.770243085573222,1.22802939780904,2.06754858726796,0.322260734604821,0.290033387828457,0.681813019328807,1.15741646340759,417.509696201831,461.640541810985,123.018654844779,191.896310282978,1.39453664789186,0.31481234683064,0,0,0,1.73986598415015,0.55597265731176,0.286249773483982,0,0,0.38126038784765,0.255897791311334,0,0.318203247925937,0.78494864019923,0.179872457583315,0.54907405947211,0.235624804691373,0.404364963146632,0,1.26377536871694,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0.405820753925408,4.3375289733965,3.09865162785466,0.430234056612155,0.294747123039363,0,1.77380532035299,0,0,0,0.349934720244983,636.316831453811,805.703335194017,694.724483415238,0.753150406214233,411.132630901025,635.137463266948,592.422685124999,356.071270320787,0,0,0,0,0,0,0,0,1.38871292465715,0,115.168901511085,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,5.96685908293468,0.71623345421307,2.37571744666111,0,0,0,7.34637453151179,4.44970460412251,28.5019300972791,1.9924798825107,0,0,7.26107645765299,0,0.311039587661807,13.9295944278357,0.179021174675609,0,2.26879832964947,0,0,0,0,0,0.260427761085233,0,0,111.51757931979,79.8356461919286,0.236387681767936,3.10269035917318,0.583209226766509,0,0,0,0,0,0,0,0,76.6830593532318,5.001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| |||
|short_description=p2@S100A2 | |||
}} |
Latest revision as of 06:08, 17 September 2015
Short description: | p2@S100A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_S100A2_5end |
Coexpression cluster: | C688_Bronchial_Tracheal_Corneal_Prostate_Urothelial_Mallassezderived_Sebocyte |
Association with transcript: | -29bp_to_ENST00000368707_5end |
EntrezGene: | S100A2 |
HGNC: | 10492 |
UniProt: | Q5RHS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.72e-29 | 253 |
endo-epithelial cell | 4.61e-24 | 42 |
endodermal cell | 3.86e-19 | 58 |
respiratory epithelial cell | 3.28e-14 | 13 |
embryonic cell | 5.61e-12 | 250 |
epithelial cell of tracheobronchial tree | 3.00e-10 | 9 |
epithelial cell of lower respiratory tract | 3.00e-10 | 9 |
squamous epithelial cell | 7.14e-09 | 63 |
general ecto-epithelial cell | 1.24e-07 | 14 |
epithelial cell of alimentary canal | 1.89e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.37e-12 | 74 |
endoderm-derived structure | 1.05e-11 | 160 |
endoderm | 1.05e-11 | 160 |
presumptive endoderm | 1.05e-11 | 160 |
orifice | 1.80e-11 | 36 |
anterior region of body | 9.40e-11 | 62 |
craniocervical region | 9.40e-11 | 62 |
head | 1.49e-10 | 56 |
oral opening | 1.65e-10 | 22 |
mouth | 2.14e-09 | 29 |
stomodeum | 2.14e-09 | 29 |
subdivision of head | 2.60e-09 | 49 |
renal system | 6.53e-08 | 48 |
respiratory tract | 7.74e-08 | 54 |
digestive system | 9.75e-08 | 145 |
digestive tract | 9.75e-08 | 145 |
primitive gut | 9.75e-08 | 145 |
tracheobronchial tree | 1.14e-07 | 15 |
lower respiratory tract | 1.14e-07 | 15 |
surface structure | 1.28e-07 | 99 |
urinary system structure | 1.32e-07 | 47 |
transitional epithelium | 1.66e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.11e-13 | 14 |
carcinoma | 4.63e-09 | 106 |
cell type cancer | 3.28e-08 | 143 |