FFCP PHASE1:Hg19::chr16:5956077..5956117,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:5956077..5956117,- | |||
|description=CAGE_peak_at_chr16:5956077..5956117,- | |description=CAGE_peak_at_chr16:5956077..5956117,- | ||
|id=chr16:5956077..5956117,- | |id=chr16:5956077..5956117,- | ||
|ontology_enrichment_celltype=CL:0002077!3.10e-08!33;CL:0000066!1.92e-07!254;CL:0000221!2.57e-07!71;CL:0002166!4.31e-07!3;CL:0000064!4.67e-07!3;CL:0005012!4.67e-07!3;CL:0000067!4.67e-07!3;CL:0002304!4.67e-07!3;CL:0002621!8.65e-07!3 | |ontology_enrichment_celltype=CL:0002077!3.10e-08!33;CL:0000066!1.92e-07!254;CL:0000221!2.57e-07!71;CL:0002166!4.31e-07!3;CL:0000064!4.67e-07!3;CL:0005012!4.67e-07!3;CL:0000067!4.67e-07!3;CL:0002304!4.67e-07!3;CL:0002621!8.65e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.25e-17;3!CL:0000067;1.25e-17;3!CL:0005012;1.25e-17;3!CL:0002304;1.25e-17;3!CL:0002166;1.85e-17;3!CL:0002621;9.85e-17;3!CL:0002159;1.24e-09;14!CL:0002077;1.01e-08;34!CL:0000342;5.36e-07;1!CL:0002565;5.36e-07;1!CL:0000075;7.03e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.29e-17,3;CL:0000064,1.61e-17,3;CL:0000067,1.61e-17,3;CL:0005012,1.61e-17,3;CL:0002304,1.61e-17,3;CL:0002621,9.58e-17,3;CL:0002159,1.18e-09,14;CL:0002077,2.98e-09,34;CL:0000342,5.37e-07,1;CL:0002565,5.37e-07,1;CL:0000075,7.36e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.92e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:4960;2.82e-07;1!DOID:0070004;2.82e-07;1!DOID:0060060;4.13e-07;1!DOID:0060085;4.13e-07;1!DOID:3165;4.13e-07;1!DOID:0060121;4.13e-07;1!DOID:2438;4.13e-07;1!DOID:0060061;4.13e-07;1!DOID:4418;4.13e-07;1!DOID:8691;4.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.82e-07,1;DOID:0070004,2.82e-07,1;DOID:0060060,3.78e-07,1;DOID:0060061,3.78e-07,1;DOID:8691,3.78e-07,1;DOID:0060085,4.51e-07,1;DOID:3165,4.51e-07,1;DOID:0060121,4.51e-07,1;DOID:2438,4.51e-07,1;DOID:4418,4.51e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000033!1.10e-12!123;UBERON:0000153!2.46e-12!129;UBERON:0007811!2.46e-12!129;UBERON:0003056!3.42e-12!61;UBERON:0001869!6.38e-12!32;UBERON:0001893!5.63e-11!34;UBERON:0002791!3.71e-10!33;UBERON:0002020!9.58e-10!34;UBERON:0003528!9.58e-10!34;UBERON:0000956!2.68e-09!25;UBERON:0000203!2.68e-09!25;UBERON:0000488!7.05e-09!4;UBERON:0002780!2.10e-08!41;UBERON:0001890!2.10e-08!41;UBERON:0006240!2.10e-08!41;UBERON:0007625!2.26e-08!11;UBERON:0003075!2.95e-08!86;UBERON:0007284!2.95e-08!86;UBERON:0003080!4.15e-08!42;UBERON:0001801!5.17e-08!14;UBERON:0004121!5.42e-08!169;UBERON:0002346!1.35e-07!90;UBERON:0000924!1.41e-07!173;UBERON:0006601!1.41e-07!173;UBERON:0001778!4.67e-07!3;UBERON:0001775!4.67e-07!3;UBERON:0002616!6.71e-07!59;UBERON:0001949!8.65e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;6.63e-23;4!UBERON:0010371;6.15e-19;31!UBERON:0007625;6.89e-18;11!UBERON:0001778;1.25e-17;3!UBERON:0001775;1.25e-17;3!UBERON:0001949;9.85e-17;3!UBERON:0002203;2.46e-15;6!UBERON:0001768;2.46e-15;6!UBERON:0002200;2.46e-15;6!UBERON:0001801;6.11e-14;14!UBERON:0001708;3.13e-13;4!UBERON:0008895;3.13e-13;4!UBERON:0011159;1.10e-10;5!UBERON:0000019;4.01e-10;19!UBERON:0000047;4.01e-10;19!UBERON:0004088;4.01e-10;19!UBERON:0010230;4.01e-10;19!UBERON:0000970;1.37e-09;20!UBERON:0002104;4.19e-09;21!UBERON:0001456;4.19e-09;21!UBERON:0006876;2.04e-08;11!UBERON:0000020;2.91e-08;23!UBERON:0005383;3.69e-08;3!UBERON:0005382;3.69e-08;3!UBERON:0001032;6.80e-08;24!UBERON:0004456;6.80e-08;24!UBERON:0003929;1.84e-07;7!UBERON:0002506;5.36e-07;1!UBERON:0001769;5.36e-07;1!UBERON:0003729;6.66e-07;13!UBERON:0001874;7.79e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,8.55e-23,4;UBERON:0007625,8.25e-18,11;UBERON:0001778,1.61e-17,3;UBERON:0001775,1.61e-17,3;UBERON:0001949,9.58e-17,3;UBERON:0002203,2.91e-15,6;UBERON:0001768,2.91e-15,6;UBERON:0002200,2.91e-15,6;UBERON:0000033,4.14e-14,56;UBERON:0001801,7.03e-14,14;UBERON:0001708,2.38e-13,4;UBERON:0008895,2.38e-13,4;UBERON:0000153,1.71e-12,62;UBERON:0007811,1.71e-12,62;UBERON:0011159,8.86e-11,5;UBERON:0000019,1.51e-09,20;UBERON:0000047,1.51e-09,20;UBERON:0010312,1.51e-09,20;UBERON:0004088,1.51e-09,20;UBERON:0010230,1.51e-09,20;UBERON:0003072,1.51e-09,20;UBERON:0004128,1.51e-09,20;UBERON:0003071,1.51e-09,20;UBERON:0001444,1.64e-09,49;UBERON:0000970,4.58e-09,21;UBERON:0002104,4.58e-09,21;UBERON:0010188,4.64e-09,6;UBERON:0002539,4.64e-09,6;UBERON:0008816,4.64e-09,6;UBERON:0001456,1.26e-08,22;UBERON:0006876,2.23e-08,11;UBERON:0005383,3.13e-08,3;UBERON:0005382,3.13e-08,3;UBERON:0005085,6.47e-08,31;UBERON:0000020,7.34e-08,24;UBERON:0001032,7.34e-08,24;UBERON:0004456,7.34e-08,24;UBERON:0008814,1.06e-07,18;UBERON:0010371,2.64e-07,104;UBERON:0002506,5.37e-07,1;UBERON:0001769,5.37e-07,1;UBERON:0003729,6.55e-07,13;UBERON:0001874,7.57e-07,1 | |||
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| ||
|short_description=p@chr16:5956077..5956117,- | |short_description=p@chr16:5956077..5956117,- | ||
}} | }} |
Latest revision as of 06:43, 17 September 2015
Short description: | p@chr16:5956077..5956117, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:5956077..5956117, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.29e-17 | 3 |
ciliated cell | 1.61e-17 | 3 |
ciliated epithelial cell | 1.61e-17 | 3 |
multi-ciliated epithelial cell | 1.61e-17 | 3 |
non-pigmented ciliary epithelial cell | 1.61e-17 | 3 |
gingival epithelial cell | 9.58e-17 | 3 |
general ecto-epithelial cell | 1.18e-09 | 14 |
ecto-epithelial cell | 2.98e-09 | 34 |
pigment cell (sensu Vertebrata) | 5.37e-07 | 1 |
iris pigment epithelial cell | 5.37e-07 | 1 |
columnar/cuboidal epithelial cell | 7.36e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.82e-07 | 1 |
myeloma | 2.82e-07 | 1 |
non-Hodgkin lymphoma | 3.78e-07 | 1 |
cutaneous T cell lymphoma | 3.78e-07 | 1 |
mycosis fungoides | 3.78e-07 | 1 |
organ system benign neoplasm | 4.51e-07 | 1 |
skin benign neoplasm | 4.51e-07 | 1 |
integumentary system benign neoplasm | 4.51e-07 | 1 |
dermis tumor | 4.51e-07 | 1 |
cutaneous fibrous histiocytoma | 4.51e-07 | 1 |