FFCP PHASE1:Hg19::chr7:151433375..151433385,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=51422 | |EntrezGene=51422 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=9386 | |HGNC=9386 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=E9PGP6 | |UniProt=E9PGP6 | ||
|association_with_transcript=14bp_to_ENST00000492843_5end | |association_with_transcript=14bp_to_ENST00000492843_5end | ||
|cluster_id=chr7:151433375..151433385,- | |||
|coexpression_cluster_id=C4667 | |coexpression_cluster_id=C4667 | ||
|description=CAGE_peak_22_at_PRKAG2_5end | |description=CAGE_peak_22_at_PRKAG2_5end | ||
Latest revision as of 06:49, 17 September 2015
| Short description: | p22@PRKAG2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_22_at_PRKAG2_5end |
| Coexpression cluster: | C4667_left_heart_skeletal_Iris_mesothelioma_lung_extraskeletal |
| Association with transcript: | 14bp_to_ENST00000492843_5end |
| EntrezGene: | PRKAG2 |
| HGNC: | 9386 |
| UniProt: | E9PGP6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p22@PRKAG2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| Schwann cell | 1.96e-08 | 2 |
| germ line cell | 3.07e-08 | 7 |
| germ cell | 3.07e-08 | 7 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| primary circulatory organ | 6.03e-13 | 27 |
| valve | 4.86e-09 | 3 |
| cardiac mesenchyme | 4.86e-09 | 3 |
| cardial valve | 4.86e-09 | 3 |
| tunica intima | 4.86e-09 | 3 |
| heart layer | 4.86e-09 | 3 |
| endocardium | 4.86e-09 | 3 |
| endocardial cushion | 4.86e-09 | 3 |
| presumptive endocardium | 4.86e-09 | 3 |
| cardiac chamber | 6.40e-09 | 3 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| heart disease | 9.00e-13 | 2 |
| vascular disease | 3.01e-07 | 1 |
| ischemia | 3.01e-07 | 1 |
| extrinsic cardiomyopathy | 3.01e-07 | 1 |
| myocardial ischemia | 3.01e-07 | 1 |
| myocardial infarction | 3.01e-07 | 1 |
| cardiovascular system disease | 8.45e-07 | 4 |
Showing 1 to 7 of 7 entries
