FFCP PHASE1:Hg19::chr6:24877453..24877462,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9750 | |EntrezGene=9750 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13872 | |HGNC=13872 | ||
|TSSclassifier=strong | |||
|UniProt=F5H029 | |UniProt=F5H029 | ||
|association_with_transcript=78bp_to_ENST00000540914_5end | |association_with_transcript=78bp_to_ENST00000540914_5end | ||
|cluster_id=chr6:24877453..24877462,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_14_at_FAM65B_5end | |description=CAGE_peak_14_at_FAM65B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!8.50e-24!7;CL:0000586!8.50e-24!7;CL:0002322!6.91e-15!5;CL:0002536!7.01e-10!2;CL:0002537!1.23e-09!5;CL:0000540!1.59e-07!6;CL:0000031!1.59e-07!6;CL:0000404!1.59e-07!6;CL:0000349!2.77e-07!3;CL:0002577!2.77e-07!3;CL:0002541!3.23e-07!3 | |ontology_enrichment_celltype=CL:0000039!8.50e-24!7;CL:0000586!8.50e-24!7;CL:0002322!6.91e-15!5;CL:0002536!7.01e-10!2;CL:0002537!1.23e-09!5;CL:0000540!1.59e-07!6;CL:0000031!1.59e-07!6;CL:0000404!1.59e-07!6;CL:0000349!2.77e-07!3;CL:0002577!2.77e-07!3;CL:0002541!3.23e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002537;9.89e-27;5!CL:0000349;8.46e-19;19!CL:0000313;1.44e-15;1!CL:0000039;5.26e-09;7!CL:0000586;5.26e-09;7!CL:0000159;1.93e-08;2 | |ontology_enrichment_celltype_v019=CL:0002537;9.89e-27;5!CL:0000349;8.46e-19;19!CL:0000313;1.44e-15;1!CL:0000039;5.26e-09;7!CL:0000586;5.26e-09;7!CL:0000159;1.93e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,9.89e-27,5;CL:0000349,7.85e-19,19;CL:0000313,1.78e-15,1;CL:0000039,5.16e-09,7;CL:0000586,5.16e-09,7;CL:0000159,2.15e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.46e-16;1 | |ontology_enrichment_development_v019=UBERON:0003124;7.46e-16;1 | ||
|ontology_enrichment_disease=DOID:3095!3.81e-07!22;DOID:2994!3.81e-07!22 | |ontology_enrichment_disease=DOID:3095!3.81e-07!22;DOID:2994!3.81e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.44e-15;1!DOID:10165;1.44e-15;1!DOID:2152;1.44e-15;1!DOID:1798;1.44e-15;1 | |ontology_enrichment_disease_v019=DOID:1799;1.44e-15;1!DOID:10165;1.44e-15;1!DOID:2152;1.44e-15;1!DOID:1798;1.44e-15;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,1.34e-15,1;DOID:10165,1.34e-15,1;DOID:1798,1.34e-15,1;DOID:2152,1.78e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.61e-32!14;UBERON:0000158!2.61e-32!14;UBERON:0000478!5.00e-18!24;UBERON:0000305!5.45e-17!7;UBERON:0003124!5.63e-17!7;UBERON:0004871!7.82e-15!8;UBERON:0001987!1.64e-11!4;UBERON:0004340!1.64e-11!4;UBERON:0004923!1.64e-09!57;UBERON:0000476!3.23e-07!3;UBERON:0000920!3.23e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!2.61e-32!14;UBERON:0000158!2.61e-32!14;UBERON:0000478!5.00e-18!24;UBERON:0000305!5.45e-17!7;UBERON:0003124!5.63e-17!7;UBERON:0004871!7.82e-15!8;UBERON:0001987!1.64e-11!4;UBERON:0004340!1.64e-11!4;UBERON:0004923!1.64e-09!57;UBERON:0000476!3.23e-07!3;UBERON:0000920!3.23e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.81e-23;10!UBERON:0000158;2.81e-23;10!UBERON:0000478;3.35e-21;24!UBERON:0000305;2.66e-19;7!UBERON:0004911;1.44e-15;1!UBERON:0001987;3.42e-15;4!UBERON:0004909;1.93e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0005631;2.81e-23;10!UBERON:0000158;2.81e-23;10!UBERON:0000478;3.35e-21;24!UBERON:0000305;2.66e-19;7!UBERON:0004911;1.44e-15;1!UBERON:0001987;3.42e-15;4!UBERON:0004909;1.93e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.77e-36,14;UBERON:0000158,1.77e-36,14;UBERON:0000478,3.12e-21,24;UBERON:0000305,2.66e-19,7;UBERON:0003124,8.04e-19,7;UBERON:0004871,5.67e-17,8;UBERON:0004911,1.78e-15,1;UBERON:0001987,3.42e-15,4;UBERON:0004340,3.42e-15,4;UBERON:0004909,2.15e-08,2;UBERON:0004923,1.50e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.232387885739037,0.518305275076852,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.35605696581915,5.64232893582013,7.37185685038157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,1.88491053260521,0.869178975376065,1.91400695839152,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.160753148465019,0.825236619583403,1.24632101408756,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,2.3571602503328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12046354122208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339777236026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0.534434810531121,2.11358268930143,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.232387885739037,0.518305275076852,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.35605696581915,5.64232893582013,7.37185685038157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,1.88491053260521,0.869178975376065,1.91400695839152,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.160753148465019,0.825236619583403,1.24632101408756,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,2.3571602503328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12046354122208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339777236026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0.534434810531121,2.11358268930143,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p14@FAM65B | |short_description=p14@FAM65B | ||
}} | }} |
Latest revision as of 06:57, 17 September 2015
Short description: | p14@FAM65B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_FAM65B_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 78bp_to_ENST00000540914_5end |
EntrezGene: | FAM65B |
HGNC: | 13872 |
UniProt: | F5H029 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 9.89e-27 | 5 |
extraembryonic cell | 7.85e-19 | 19 |
serous secreting cell | 1.78e-15 | 1 |
germ line cell | 5.16e-09 | 7 |
germ cell | 5.16e-09 | 7 |
seromucus secreting cell | 2.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.77e-36 | 14 |
membranous layer | 1.77e-36 | 14 |
extraembryonic structure | 3.12e-21 | 24 |
amnion | 2.66e-19 | 7 |
chorion | 8.04e-19 | 7 |
somatic layer of lateral plate mesoderm | 5.67e-17 | 8 |
epithelium of female gonad | 1.78e-15 | 1 |
placenta | 3.42e-15 | 4 |
allantois | 3.42e-15 | 4 |
epithelium of gonad | 2.15e-08 | 2 |
organ component layer | 1.50e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.34e-15 | 1 |
endocrine pancreas cancer | 1.34e-15 | 1 |
pancreatic endocrine carcinoma | 1.34e-15 | 1 |
ovary epithelial cancer | 1.78e-15 | 1 |