FFCP PHASE1:Hg19::chr11:20621148..20621166,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=9152 | |EntrezGene=9152 | ||
| Line 8: | Line 8: | ||
|UniProt=Q9Y345 | |UniProt=Q9Y345 | ||
|association_with_transcript=8bp_to_ENST00000298923_5end | |association_with_transcript=8bp_to_ENST00000298923_5end | ||
|cluster_id=chr11:20621148..20621166,+ | |||
|coexpression_cluster_id=C993 | |coexpression_cluster_id=C993 | ||
|description=CAGE_peak_1_at_SLC6A5_5end | |description=CAGE_peak_1_at_SLC6A5_5end | ||
Latest revision as of 07:15, 17 September 2015
| Short description: | p1@SLC6A5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SLC6A5_5end |
| Coexpression cluster: | C993_locus_medulla_spinal_pons_small_cerebellum_amygdala |
| Association with transcript: | 8bp_to_ENST00000298923_5end |
| EntrezGene: | SLC6A5 |
| HGNC: | 11051 |
| UniProt: | Q9Y345 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SLC6A5 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| posterior neural tube | 2.31e-117 | 15 |
| chordal neural plate | 2.31e-117 | 15 |
| brainstem | 3.09e-91 | 6 |
| segmental subdivision of hindbrain | 5.84e-89 | 12 |
| hindbrain | 5.84e-89 | 12 |
| presumptive hindbrain | 5.84e-89 | 12 |
| segmental subdivision of nervous system | 3.84e-82 | 13 |
| medulla oblongata | 1.92e-66 | 3 |
| myelencephalon | 1.92e-66 | 3 |
| future myelencephalon | 1.92e-66 | 3 |
Showing 1 to 10 of 44 entries
