FFCP PHASE1:Hg19::chr12:12878876..12878897,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81575 | |EntrezGene=81575 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25268 | |HGNC=25268 | ||
|TSSclassifier=strong | |||
|UniProt=Q96LR9 | |UniProt=Q96LR9 | ||
|association_with_transcript=11bp_to_ENST00000326765_5end | |association_with_transcript=11bp_to_ENST00000326765_5end | ||
|cluster_id=chr12:12878876..12878897,+ | |||
|description=CAGE_peak_5_at_APOLD1_5end | |description=CAGE_peak_5_at_APOLD1_5end | ||
|id=chr12:12878876..12878897,+ | |id=chr12:12878876..12878897,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.00e-22!182;CL:0000037!1.29e-21!172;CL:0000566!1.29e-21!172;CL:0002032!3.85e-19!165;CL:0000837!3.85e-19!165;CL:0000542!3.08e-18!53;CL:0000051!3.08e-18!53;CL:0000838!1.03e-17!52;CL:0000219!1.03e-15!390;CL:0000738!3.35e-15!140;CL:0000134!2.69e-13!358;CL:0002320!1.96e-12!365;CL:0002031!9.08e-11!124;CL:0000945!4.23e-10!24;CL:0000826!4.23e-10!24;CL:0002087!5.40e-10!119;CL:0000084!1.18e-07!25;CL:0000827!1.18e-07!25 | |ontology_enrichment_celltype=CL:0000988!1.00e-22!182;CL:0000037!1.29e-21!172;CL:0000566!1.29e-21!172;CL:0002032!3.85e-19!165;CL:0000837!3.85e-19!165;CL:0000542!3.08e-18!53;CL:0000051!3.08e-18!53;CL:0000838!1.03e-17!52;CL:0000219!1.03e-15!390;CL:0000738!3.35e-15!140;CL:0000134!2.69e-13!358;CL:0002320!1.96e-12!365;CL:0002031!9.08e-11!124;CL:0000945!4.23e-10!24;CL:0000826!4.23e-10!24;CL:0002087!5.40e-10!119;CL:0000084!1.18e-07!25;CL:0000827!1.18e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000542;6.35e-19;53!CL:0000945;1.40e-17;24!CL:0000084;1.79e-11;25!CL:0000791;4.75e-11;18!CL:0000789;4.75e-11;18!CL:0002419;4.75e-11;18!CL:0000624;1.94e-09;6!CL:0000081;2.66e-08;11!CL:0000094;5.80e-07;8 | |ontology_enrichment_celltype_v019=CL:0000542;6.35e-19;53!CL:0000945;1.40e-17;24!CL:0000084;1.79e-11;25!CL:0000791;4.75e-11;18!CL:0000789;4.75e-11;18!CL:0002419;4.75e-11;18!CL:0000624;1.94e-09;6!CL:0000081;2.66e-08;11!CL:0000094;5.80e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.72e-33,53;CL:0000051,9.72e-33,53;CL:0000838,1.27e-31,52;CL:0000988,1.22e-28,177;CL:0000037,8.06e-27,168;CL:0002032,9.00e-24,161;CL:0000837,9.00e-24,161;CL:0000738,4.39e-21,136;CL:0000945,5.52e-18,24;CL:0000826,5.52e-18,24;CL:0002087,2.99e-15,115;CL:0002031,2.70e-13,120;CL:0000084,4.23e-12,25;CL:0000827,4.23e-12,25;CL:0000791,1.20e-11,18;CL:0000789,1.20e-11,18;CL:0002420,1.20e-11,18;CL:0002419,1.20e-11,18;CL:0000790,1.20e-11,18;CL:0000134,6.20e-10,354;CL:0000219,8.88e-10,386;CL:0000624,1.00e-09,6;CL:0002320,2.53e-09,361;CL:0000081,1.47e-08,11;CL:0000094,2.55e-07,8;CL:0000236,2.64e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;6.35e-19;53!CL:0000790;4.75e-11;18 | |ontology_enrichment_development_v019=CL:0000051;6.35e-19;53!CL:0000790;4.75e-11;18 | ||
|ontology_enrichment_disease=DOID:2531!2.49e-11!51;DOID:0060083!2.49e-11!51;DOID:0060058!8.30e-07!10 | |ontology_enrichment_disease=DOID:2531!2.49e-11!51;DOID:0060083!2.49e-11!51;DOID:0060058!8.30e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;8.67e-11;10!DOID:2531;8.23e-07;51!DOID:0060083;8.23e-07;51 | |ontology_enrichment_disease_v019=DOID:0060058;8.67e-11;10!DOID:2531;8.23e-07;51!DOID:0060083;8.23e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,7.92e-12,51;DOID:0060083,7.92e-12,51;DOID:0060058,1.91e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.21e-12!375 | |ontology_enrichment_uberon=UBERON:0002384!2.21e-12!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0002390;4.91e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002390;4.91e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.80e-09,371 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0.331397375727916,0,0,0.730310090387373,0,0.369363174230364,0,0.313454721478088,0.85870796139317,0.136874425072884,0.376627918784408,2.44522898393444,2.13461532569859,1.57421562627358,1.96682138424452,0,1.85779347979291,0,0,0,1.78174561334694,1.56386155736164,1.76160263600908,0,1.40381113229099,1.73608696572681,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0.75374599577023,1.0429658368404,0.434377689410233,1.21079900526674,0.368277635987565,0.316462387440884,0.422510572623884,1.06302149982522,0.628975936525128,0.561643155732475,0.750884464207532,0.48217676009124,0.570025487482497,0.99458338599545,0.730656615058536,0,1.09227722252426,0,0.426730222566507,1.60158394814405,1.14950487990897,1.32208974556972,0.954053754535364,5.12291672198504,3.52342313622563,2.6759125968766,1.32171328579026,0.560508562981536,1.58030450865046,2.55722701147983,1.96505381374582,1.23360899399706,1.67186495390678,2.60737813306872,0,1.94826728407911,3.7879555340959,6.48132996444642,1.77227115666897,4.33286182024025,2.17755243533648,3.90178042679635,3.4531959966772,2.48715016007264,7.82468331484642,1.63115219478266,0.535081656179426,0,2.83273356743915,3.06576394881537,1.03088233644789,2.27717722817553,0.318565414324097,0,1.90090408889675,0.903450714466637,0.255973222308837,0,1.18388626022008,1.64225599384209,1.41124720257313,1.33720097891754,1.73789284659359,0,0,0.12786256184353,0.722878304769133,0,0.289693037921647,0.795285947051099,0,1.03988298880475,0,0.43917392846563,0.0654895377488563,0,0,0,0,0,0.238490624305342,0.571994910780128,0.74291500265913,0.198762407366705,0,1.04142150482278,1.13061588384802,0,0,0.208994966536811,0,0,0.33472061276467,0.805658634218294,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0.673588117878509,0.675668882899933,0,0,0,9.22462922052443,0,0,0,0.379891534993739,0,2.58152958673932,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.653847612453835,0.454072282934794,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.23486899728753,0.161872944368132,0.421352420106746,1.02077085627447,0.737005903870608,0,1.18800285728205,0.741800787835671,0.910161361938026,0,0.505008341862199,0.625592599359821,0.554128230968366,2.19488810440419,0.612975591598039,0.901428353439581,0.340296549480063,0.538168907066586,0.213557388818567,0.423863802319124,1.80054657650641,0.721367704669072,0.772921620136887,0.18611685633159,1.18143432568886,0.68205903612839,0.757301322732344,0.184099797284599,0.484938170456436,0.355009592516614,0.705264687593482,0.339121184620975,0,0.272746120590835,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0.241011029883482,0.772057809126758,0.435758888184812,0.237270619111097,0.134831308160164,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,2.20731549707325,0.122988438543114,0,0,0,0.100528972411631,0,0,0,1.44331342025273,0.115930404975077,0,0,0.462985512576611,0.380508304469197,0,0.858486162094873,0.246217006087397,0.468008530278475,0,0,0,0,0,0.290633938513962,0,1.97065295158377,1.14462964217194,0.829312462163088,0.432359860250884,0.6312121671319,0.444485260045183,1.14596527667483,1.17217447210047,0,0.308482478109971,0,0.857479297891735,0.448524337381443,0.43596006883328,0.1466765716419,0,0,0,0.531876233169741,0,1.02882949704857,0,0.532844358032199,0,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0,0.205476322550383,0.537182889719687,2.91421374383171,2.1673383622212,1.07813787429759,1.28343036279748,0.254094624222463,0,0,0,0,2.24702107184155,5.9832291840805,3.31532410748828,0,0,0.271265023699736,0.831883446123229,0.535286966391485,0.788512075169673,0.937131319941706,0.300946099727719,0,1.03473071292505,0.664225598535437,0.737476674166813,0.695068915744663,0.195801157462741,0,1.03384013061444,1.50999940573032,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0.532685175939381,0.657017248110473,1.03850885836724,0.348631135379878,0,0,0,1.03333003348146,2.00300284807389,0.524497659837696,0,0,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0,0.657779629937804,1.0457418040996,0,0.328014645699706,0,0.206082023295445,2.83865340936865,2.88783249722058,0,0,0,0.096670718292122,0.462145851343933,0.614014698904518,0.413509717453592,0.429680979473094,0.580066775656914,0.340906509664404,0.267096106940212,0,0.192190067365106,0.382838137483752,0,0,0,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.286822704408103,0.294747123039363,0,0.70952212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| ||
|short_description=p5@APOLD1 | |short_description=p5@APOLD1 | ||
}} | }} |
Latest revision as of 07:27, 17 September 2015
Short description: | p5@APOLD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APOLD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000326765_5end |
EntrezGene: | APOLD1 |
HGNC: | 25268 |
UniProt: | Q96LR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.72e-33 | 53 |
common lymphoid progenitor | 9.72e-33 | 53 |
lymphoid lineage restricted progenitor cell | 1.27e-31 | 52 |
hematopoietic cell | 1.22e-28 | 177 |
hematopoietic stem cell | 8.06e-27 | 168 |
hematopoietic oligopotent progenitor cell | 9.00e-24 | 161 |
hematopoietic multipotent progenitor cell | 9.00e-24 | 161 |
leukocyte | 4.39e-21 | 136 |
lymphocyte of B lineage | 5.52e-18 | 24 |
pro-B cell | 5.52e-18 | 24 |
nongranular leukocyte | 2.99e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.70e-13 | 120 |
T cell | 4.23e-12 | 25 |
pro-T cell | 4.23e-12 | 25 |
mature alpha-beta T cell | 1.20e-11 | 18 |
alpha-beta T cell | 1.20e-11 | 18 |
immature T cell | 1.20e-11 | 18 |
mature T cell | 1.20e-11 | 18 |
immature alpha-beta T cell | 1.20e-11 | 18 |
mesenchymal cell | 6.20e-10 | 354 |
motile cell | 8.88e-10 | 386 |
CD4-positive, alpha-beta T cell | 1.00e-09 | 6 |
connective tissue cell | 2.53e-09 | 361 |
blood cell | 1.47e-08 | 11 |
granulocyte | 2.55e-07 | 8 |
B cell | 2.64e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.80e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.92e-12 | 51 |
immune system cancer | 7.92e-12 | 51 |
lymphoma | 1.91e-11 | 10 |