FFCP PHASE1:Hg19::chr12:129304411..129304414,-: Difference between revisions
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|id=chr12:129304411..129304414,-
|short_description=p11@SLC15A4
|description=CAGE_peak_11_at_SLC15A4_5end
|association_with_transcript=0bp_to_ENST00000535272_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121260 | |EntrezGene=121260 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23090 | |HGNC=23090 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000535272_5end | |||
|cluster_id=chr12:129304411..129304414,- | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_11_at_SLC15A4_5end | |||
|id=chr12:129304411..129304414,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000062;1.21e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.63e-07,11;CL:0000375,2.63e-07,11;CL:0000335,2.63e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.63e-07;11 | |||
|ontology_enrichment_disease=DOID:9119!8.58e-14!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!1.11e-38!3;UBERON:0005290!1.11e-38!3;UBERON:0010096!1.11e-38!3;UBERON:0002298!2.05e-25!8;UBERON:0001049!2.52e-20!57;UBERON:0005068!2.52e-20!57;UBERON:0006241!2.52e-20!57;UBERON:0007135!2.52e-20!57;UBERON:0001017!6.96e-20!82;UBERON:0000955!7.39e-20!69;UBERON:0006238!7.39e-20!69;UBERON:0002616!1.31e-19!59;UBERON:0005743!6.49e-19!86;UBERON:0004733!4.61e-17!12;UBERON:0002028!4.61e-17!12;UBERON:0007277!4.61e-17!12;UBERON:0000073!5.03e-17!94;UBERON:0001016!5.03e-17!94;UBERON:0003075!4.87e-16!86;UBERON:0007284!4.87e-16!86;UBERON:0004732!8.96e-16!13;UBERON:0002346!2.83e-15!90;UBERON:0007023!3.97e-14!115;UBERON:0002336!5.85e-14!1;UBERON:0001018!5.85e-14!1;UBERON:0002473!5.85e-14!1;UBERON:0005340!5.85e-14!1;UBERON:0002316!5.85e-14!1;UBERON:0003544!5.85e-14!1;UBERON:0001020!5.85e-14!1;UBERON:0005970!5.85e-14!1;UBERON:0002437!5.85e-14!1;UBERON:0003076!1.04e-13!15;UBERON:0003057!1.04e-13!15;UBERON:0000349!7.14e-11!5;UBERON:0000033!1.08e-10!123;UBERON:0002780!2.36e-10!41;UBERON:0001890!2.36e-10!41;UBERON:0006240!2.36e-10!41;UBERON:0000153!3.86e-10!129;UBERON:0007811!3.86e-10!129;UBERON:0003080!4.19e-10!42;UBERON:0004121!6.26e-09!169;UBERON:0000924!1.09e-08!173;UBERON:0006601!1.09e-08!173;UBERON:0001894!4.42e-08!7;UBERON:0006222!4.42e-08!7;UBERON:0002360!1.12e-07!2;UBERON:0000094!1.12e-07!2;UBERON:0007645!1.12e-07!2;UBERON:0001897!1.20e-07!2;UBERON:0005162!1.28e-07!2;UBERON:0000122!1.28e-07!2;UBERON:0001954!1.45e-07!2;UBERON:0003022!1.45e-07!2;UBERON:0002421!1.45e-07!2;UBERON:0002600!1.45e-07!2;UBERON:0001876!1.87e-07!2;UBERON:0002148!2.12e-07!2;UBERON:0009662!2.12e-07!2;UBERON:0001871!4.28e-07!7;UBERON:0003056!6.79e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;6.24e-88;3!UBERON:0005290;6.24e-88;3!UBERON:0002298;9.76e-45;6!UBERON:0004733;4.59e-23;12!UBERON:0002028;4.59e-23;12!UBERON:0004732;2.16e-21;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,6.24e-88,3;UBERON:0005290,6.24e-88,3;UBERON:0010096,6.24e-88,3;UBERON:0002298,9.76e-45,6;UBERON:0004733,4.59e-23,12;UBERON:0002028,4.59e-23,12;UBERON:0007277,4.59e-23,12;UBERON:0004732,2.16e-21,13;UBERON:0003076,1.04e-18,15;UBERON:0003057,1.04e-18,15 | |||
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|short_description=p11@SLC15A4 | |||
}} | }} |
Latest revision as of 07:37, 17 September 2015
Short description: | p11@SLC15A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC15A4_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | 0bp_to_ENST00000535272_5end |
EntrezGene: | SLC15A4 |
HGNC: | 23090 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.63e-07 | 11 |
osteoprogenitor cell | 2.63e-07 | 11 |
mesenchyme condensation cell | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 6.24e-88 | 3 |
myelencephalon | 6.24e-88 | 3 |
future myelencephalon | 6.24e-88 | 3 |
brainstem | 9.76e-45 | 6 |
segmental subdivision of hindbrain | 4.59e-23 | 12 |
hindbrain | 4.59e-23 | 12 |
presumptive hindbrain | 4.59e-23 | 12 |
segmental subdivision of nervous system | 2.16e-21 | 13 |
posterior neural tube | 1.04e-18 | 15 |
chordal neural plate | 1.04e-18 | 15 |