FFCP PHASE1:Hg19::chr9:35619539..35619544,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:35619539..35619544,-
|short_description=p4@CD72
|description=CAGE_peak_4_at_CD72_5end
|association_with_transcript=0bp_to_ENST00000396757_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=971 | |EntrezGene=971 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1696 | |HGNC=1696 | ||
|TSSclassifier=strong | |||
|UniProt=P21854 | |UniProt=P21854 | ||
|association_with_transcript=0bp_to_ENST00000396757_5end | |||
|cluster_id=chr9:35619539..35619544,- | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_4_at_CD72_5end | |||
|id=chr9:35619539..35619544,- | |||
|ontology_enrichment_celltype=CL:0000738!3.80e-48!140;CL:0000037!4.93e-45!172;CL:0000566!4.93e-45!172;CL:0002087!3.76e-41!119;CL:0000988!4.52e-41!182;CL:0002032!8.77e-41!165;CL:0000837!8.77e-41!165;CL:0002031!1.29e-36!124;CL:0000542!5.30e-36!53;CL:0000051!5.30e-36!53;CL:0000838!1.39e-34!52;CL:0000945!8.08e-21!24;CL:0000826!8.08e-21!24;CL:0002057!3.84e-13!42;CL:0000625!4.68e-12!11;CL:0000236!6.31e-12!14;CL:0000860!8.40e-12!45;CL:0000763!9.20e-12!112;CL:0000049!9.20e-12!112;CL:0000084!1.08e-11!25;CL:0000827!1.08e-11!25;CL:0000791!6.14e-11!18;CL:0000789!6.14e-11!18;CL:0002420!6.14e-11!18;CL:0002419!6.14e-11!18;CL:0000790!6.14e-11!18;CL:0000766!5.64e-10!76;CL:0000134!9.69e-10!358;CL:0002320!3.91e-09!365;CL:0000557!1.16e-08!71;CL:0002009!1.81e-08!65;CL:0002194!4.92e-08!63;CL:0000576!4.92e-08!63;CL:0000040!4.92e-08!63;CL:0000559!4.92e-08!63;CL:0000839!5.13e-08!70;CL:0000219!4.63e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.57e-18;24!CL:0000542;1.64e-13;53!CL:0000623;9.42e-09;3!CL:0000226;1.68e-08;3!CL:0000842;1.68e-08;3!CL:0002087;7.00e-08;104!CL:0000946;1.64e-07;1!CL:0000786;1.64e-07;1!CL:0000236;2.85e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,5.02e-26,115;CL:0000542,5.48e-25,53;CL:0000051,5.48e-25,53;CL:0000738,3.11e-23,136;CL:0000037,3.95e-23,168;CL:0000838,3.11e-22,52;CL:0000988,1.14e-21,177;CL:0002032,1.31e-20,161;CL:0000837,1.31e-20,161;CL:0002031,1.84e-18,120;CL:0000945,3.41e-18,24;CL:0000826,3.41e-18,24;CL:0000236,1.76e-10,14;CL:0000623,6.66e-09,3;CL:0000825,6.66e-09,3;CL:0000226,1.44e-08,3;CL:0000842,1.44e-08,3;CL:0000134,5.67e-08,354;CL:0002320,1.05e-07,361;CL:0000946,1.65e-07,1;CL:0000786,1.65e-07,1;CL:0000980,1.65e-07,1;CL:0000219,9.16e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000051;1.64e-13;53!UBERON:0004872;5.49e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;2.22e-07;1!DOID:630;5.44e-07;1!DOID:0050177;5.44e-07;1!DOID:0050427;5.44e-07;1!DOID:2355;5.44e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.08e-08,51;DOID:0060083,8.08e-08,51;DOID:12603,2.10e-07,1;DOID:630,6.12e-07,1;DOID:0050177,6.12e-07,1;DOID:0050427,6.12e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.77e-15!102;UBERON:0003061!6.77e-15!102;UBERON:0002193!2.98e-14!112;UBERON:0000178!2.07e-10!15;UBERON:0000179!2.07e-10!15;UBERON:0000463!2.07e-10!15;UBERON:0002384!8.84e-09!375;UBERON:0002405!2.37e-07!115;UBERON:0002371!6.86e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.42e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.40e-09,3;UBERON:0004854,6.40e-09,3;UBERON:0009034,6.40e-09,3;UBERON:0002095,6.40e-09,3;UBERON:0004782,6.40e-09,3;UBERON:0003281,6.40e-09,3;UBERON:0009664,6.40e-09,3;UBERON:0002296,6.40e-09,3;UBERON:0005602,6.40e-09,3;UBERON:0001179,6.40e-09,3;UBERON:0006293,6.40e-09,3;UBERON:0002384,2.43e-07,371;UBERON:0002390,4.46e-07,98;UBERON:0003061,4.46e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.164201178899891,0.236132343941038,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,2.09161441566814,1.70603078984906,0,0,0.601633342410425,0.217010870715852,0.447830948479849,0,0,0,0,0,0.464858073811369,0.822335776043652,1.54853185447552,0.28769239232215,0.256160706529101,0,0.689491361473237,0,1.35426486594342,0,0.818718450173537,0.224723484445085,0.306083892370903,1.92557416245656,1.27867425159808,0,0,0,0.290209238628584,0,0,0.251248665256743,1.0429658368404,0.217188844705117,0,0.736555271975129,1.26584954976354,0.211255286311942,0.425208599930087,0,0.336985893439485,0,0,0.285012743741249,0,0,0,0.546138611262131,3.55803701545422,0.426730222566507,0.400395987036012,0,1.98313461835459,1.90810750907073,0.569212969109448,0,1.52909291250092,0,0.560508562981536,0.526768169550154,0,0.786021525498329,0.205601498999509,0,0,0,0,0.557052284425868,0.294605907474837,0.221533894583621,0,0,0,0.164437904603676,0.552700035571697,0.579606171470105,0,0,0,0.226618685395132,0,0.34362744548263,0.253019692019503,1.27426165729639,0.651083453856419,0,0.150575119077773,0.255973222308837,2.49861453104692,0.473554504088034,0.821127996921047,0.80642697289893,0.534880391567015,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.788123040807709,2.37190332345469,1.92514554419623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.72571360654893,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0,2.60124445176006,0.865615277858669,23.1210990882346,0.956557636372934,0.399158742865633,0,1.69338866179106,0,0.280797178113459,0.912938716132769,0,0,0,1.1241165257259,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0.276283915531148,0,0,0.123084805461069,0,0,0,3.06943422136123,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,5.10966490978682,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,1.01607998478941,0,0,0.321506296930038,0,0,0.899895566206002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.320362237703084,0.157204305099666,0,0.496166021811951,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.327130788511688,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,4.60935950223117,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.196308467114945,0.297046400327086,0,0,1.78569444161722,2.8361470708374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0.869046000142011,0,0.12729431655633,0.404234377916439,0,0,0.942928742204225,0.286888821570705,0,0,0,0,0,0,0,0,0,0.805095174364105,1.28227396921293 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| ||
|short_description=p4@CD72 | |||
}} | }} |
Latest revision as of 07:51, 17 September 2015
Short description: | p4@CD72 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD72_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | 0bp_to_ENST00000396757_5end |
EntrezGene: | CD72 |
HGNC: | 1696 |
UniProt: | P21854 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 5.02e-26 | 115 |
lymphocyte | 5.48e-25 | 53 |
common lymphoid progenitor | 5.48e-25 | 53 |
leukocyte | 3.11e-23 | 136 |
hematopoietic stem cell | 3.95e-23 | 168 |
lymphoid lineage restricted progenitor cell | 3.11e-22 | 52 |
hematopoietic cell | 1.14e-21 | 177 |
hematopoietic oligopotent progenitor cell | 1.31e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 1.84e-18 | 120 |
lymphocyte of B lineage | 3.41e-18 | 24 |
pro-B cell | 3.41e-18 | 24 |
B cell | 1.76e-10 | 14 |
natural killer cell | 6.66e-09 | 3 |
pro-NK cell | 6.66e-09 | 3 |
single nucleate cell | 1.44e-08 | 3 |
mononuclear cell | 1.44e-08 | 3 |
mesenchymal cell | 5.67e-08 | 354 |
connective tissue cell | 1.05e-07 | 361 |
antibody secreting cell | 1.65e-07 | 1 |
plasma cell | 1.65e-07 | 1 |
plasmablast | 1.65e-07 | 1 |
motile cell | 9.16e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.40e-09 | 3 |
gastrointestinal system mesentery | 6.40e-09 | 3 |
stomach region | 6.40e-09 | 3 |
mesentery | 6.40e-09 | 3 |
gastrointestinal system serosa | 6.40e-09 | 3 |
mesentery of stomach | 6.40e-09 | 3 |
gut mesentery | 6.40e-09 | 3 |
dorsal mesentery | 6.40e-09 | 3 |
dorsal mesogastrium | 6.40e-09 | 3 |
peritoneal cavity | 6.40e-09 | 3 |
spleen primordium | 6.40e-09 | 3 |
connective tissue | 2.43e-07 | 371 |
hematopoietic system | 4.46e-07 | 98 |
blood island | 4.46e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.08e-08 | 51 |
immune system cancer | 8.08e-08 | 51 |
acute leukemia | 2.10e-07 | 1 |
genetic disease | 6.12e-07 | 1 |
monogenic disease | 6.12e-07 | 1 |
xeroderma pigmentosum | 6.12e-07 | 1 |