FFCP PHASE1:Hg19::chr1:153935742..153935752,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27173 | |EntrezGene=27173 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12876 | |HGNC=12876 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T4K2 | |UniProt=Q5T4K2 | ||
|association_with_transcript=-4bp_to_ENST00000417348_5end | |association_with_transcript=-4bp_to_ENST00000417348_5end | ||
|cluster_id=chr1:153935742..153935752,- | |||
|description=CAGE_peak_9_at_SLC39A1_5end | |description=CAGE_peak_9_at_SLC39A1_5end | ||
|id=chr1:153935742..153935752,- | |id=chr1:153935742..153935752,- | ||
|ontology_enrichment_celltype=CL:0000548!7.68e-10!679;CL:0000004!7.68e-10!679;CL:0000255!7.68e-10!679;CL:0000012!1.15e-09!682;CL:0000066!1.08e-07!254 | |ontology_enrichment_celltype=CL:0000548!7.68e-10!679;CL:0000004!7.68e-10!679;CL:0000255!7.68e-10!679;CL:0000012!1.15e-09!682;CL:0000066!1.08e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002561;1.71e-08;2!CL:0002559;3.62e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.20e-08,2;CL:0002559,1.79e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.62e-07!106 | |ontology_enrichment_disease=DOID:305!1.62e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.16e-09;9!UBERON:0001557;1.16e-09;9!UBERON:0005933;1.71e-08;2!UBERON:0005942;1.71e-08;2!UBERON:0005932;1.71e-08;2!UBERON:0002073;3.62e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.64e-09,9;UBERON:0005933,1.20e-08,2;UBERON:0005942,1.20e-08,2;UBERON:0005932,1.20e-08,2;UBERON:0002073,1.79e-07,5;UBERON:0005086,1.79e-07,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0.655324116390517,1.05506791291381,0.247532705920093,0,0,0,0,0.487932798790507,0.246242116153576,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0.916960868975415,0.410502947249729,0.708397031823113,0,0,0,0.919421224478927,0,0.369754010166788,0.232401601740905,0,0,0,0,0,0.447830948479849,0,0.515151135268373,0.581592955118259,0.377875943688809,0,0.464858073811369,0.411167888021826,0.619412741790207,0.863077176966451,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0.521482918420201,0.434377689410233,0,0.368277635987565,0,0,0.425208599930087,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.283604451492204,0.221729397462564,0.263504357079378,0,0,0.370784442784429,0,0,0.664789802594326,0,0,0,0.198762407366705,0,0.694281003215189,0,0,0,0.208994966536811,0.258416759169329,0,0.66944122552934,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,1.24864030732128,0,0.448346041655403,0,0,0,0.816616685019573,0.245668634623536,0.309977343527296,0,0,0,0,0.336672227908132,0.125118519871964,0.831192346452549,0,0,0.300476117813194,0,0.179389635688862,0.427114777637135,0.847727604638247,0,0.309157587715317,0,0.744467425326359,0.337552664482532,0.0974370051611986,0,0.276149695926898,0.646584227275248,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0,0.265059536642971,0.348581828608555,0.310983165046111,0,0.36497735907583,0,1.92972281457866,0,1.39310378409594,2.88751792667834,1.30137480043828,1.51726221070292,0.241011029883482,1.10293972732394,0.871517776369625,0.71181185733329,0.539325232640658,1.17732879075208,1.15424147083917,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0,0.288732895522148,0.462985512576611,0.570762456703795,0.790204397959275,2.57545848628462,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0.25248486685276,0,0,1.17217447210047,0,0,0,0.571652865261156,0,0,0.07333828582095,0.129271715757778,3.57656445851882,0.845302752556,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0.714889968290738,2.71310802695722,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.36807447515742,1.00034104211935,0.271265023699736,0.415941723061614,0.713715955188647,0,0.117141414992713,0.902838299183157,6.82222512167955,1.03473071292505,0,0.184369168541703,0.347534457872331,0.195801157462741,1.37257369524342,0,0.215714200818617,0.213455115606889,0.303127571446259,0,1.81434175997808,0.496215615637554,0,1.12264037773229,0.256278298511402,0,0.321707842287215,1.48418066444991,0,0.177561725313127,0.246381468041427,1.03850885836724,0.348631135379878,0.362578348774867,0.40101294060657,0.276242966807689,0,0,0.131124414959424,1.35359883872224,0.308061348417659,0,0,0.211103257785751,0,0.340187410553031,0.215915916102139,1.54227252690289,0.270946437543853,1.50506932156456,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,2.29610251989794,1.62689197332152,0.206082023295445,0.183138929636687,0.330037999682352,0.574265537996172,0,0,0.193341436584244,0,0.614014698904518,0.137836572484531,0,0.290033387828457,0.426133137080504,0.0890320356467374,0.165284915360978,0.192190067365106,0,0,0,0.31481234683064,0.6970372701606,0,0.532306030317022,0.869932992075073,0.55597265731176,0.429374660225974,0.372158369359667,0.632758849437452,0.190630193923825,0.511795582622668,0,0.636406495851874,0.78494864019923,0,0,0.117812402345686,0.404364963146632,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0.66343897524122,0,1.15755106853338,0,0.811641507850816,0.30982349809975,0,0.286822704408103,0,0.7133421029625,0,0.422215270595328,0.658589785919804,0.75894634753143,0,0.288666338176536,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0.534120355637366,0,0.245040215981032,0,0,0,0,0,0,1.2700414963433,0.649243880549111,0.280797178113459,0,0.313359791546046,0,0,0.1605880751037,0,0,0,0,0.894704431569664,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.485442086998054,0.557216921387392,0,0.47748896947538,0.890894042497916,0.3071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| |phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0.655324116390517,1.05506791291381,0.247532705920093,0,0,0,0,0.487932798790507,0.246242116153576,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0.916960868975415,0.410502947249729,0.708397031823113,0,0,0,0.919421224478927,0,0.369754010166788,0.232401601740905,0,0,0,0,0,0.447830948479849,0,0.515151135268373,0.581592955118259,0.377875943688809,0,0.464858073811369,0.411167888021826,0.619412741790207,0.863077176966451,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0.521482918420201,0.434377689410233,0,0.368277635987565,0,0,0.425208599930087,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.283604451492204,0.221729397462564,0.263504357079378,0,0,0.370784442784429,0,0,0.664789802594326,0,0,0,0.198762407366705,0,0.694281003215189,0,0,0,0.208994966536811,0.258416759169329,0,0.66944122552934,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,1.24864030732128,0,0.448346041655403,0,0,0,0.816616685019573,0.245668634623536,0.309977343527296,0,0,0,0,0.336672227908132,0.125118519871964,0.831192346452549,0,0,0.300476117813194,0,0.179389635688862,0.427114777637135,0.847727604638247,0,0.309157587715317,0,0.744467425326359,0.337552664482532,0.0974370051611986,0,0.276149695926898,0.646584227275248,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0,0.265059536642971,0.348581828608555,0.310983165046111,0,0.36497735907583,0,1.92972281457866,0,1.39310378409594,2.88751792667834,1.30137480043828,1.51726221070292,0.241011029883482,1.10293972732394,0.871517776369625,0.71181185733329,0.539325232640658,1.17732879075208,1.15424147083917,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0,0.288732895522148,0.462985512576611,0.570762456703795,0.790204397959275,2.57545848628462,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0.25248486685276,0,0,1.17217447210047,0,0,0,0.571652865261156,0,0,0.07333828582095,0.129271715757778,3.57656445851882,0.845302752556,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0.714889968290738,2.71310802695722,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.36807447515742,1.00034104211935,0.271265023699736,0.415941723061614,0.713715955188647,0,0.117141414992713,0.902838299183157,6.82222512167955,1.03473071292505,0,0.184369168541703,0.347534457872331,0.195801157462741,1.37257369524342,0,0.215714200818617,0.213455115606889,0.303127571446259,0,1.81434175997808,0.496215615637554,0,1.12264037773229,0.256278298511402,0,0.321707842287215,1.48418066444991,0,0.177561725313127,0.246381468041427,1.03850885836724,0.348631135379878,0.362578348774867,0.40101294060657,0.276242966807689,0,0,0.131124414959424,1.35359883872224,0.308061348417659,0,0,0.211103257785751,0,0.340187410553031,0.215915916102139,1.54227252690289,0.270946437543853,1.50506932156456,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,2.29610251989794,1.62689197332152,0.206082023295445,0.183138929636687,0.330037999682352,0.574265537996172,0,0,0.193341436584244,0,0.614014698904518,0.137836572484531,0,0.290033387828457,0.426133137080504,0.0890320356467374,0.165284915360978,0.192190067365106,0,0,0,0.31481234683064,0.6970372701606,0,0.532306030317022,0.869932992075073,0.55597265731176,0.429374660225974,0.372158369359667,0.632758849437452,0.190630193923825,0.511795582622668,0,0.636406495851874,0.78494864019923,0,0,0.117812402345686,0.404364963146632,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0.66343897524122,0,1.15755106853338,0,0.811641507850816,0.30982349809975,0,0.286822704408103,0,0.7133421029625,0,0.422215270595328,0.658589785919804,0.75894634753143,0,0.288666338176536,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0.534120355637366,0,0.245040215981032,0,0,0,0,0,0,1.2700414963433,0.649243880549111,0.280797178113459,0,0.313359791546046,0,0,0.1605880751037,0,0,0,0,0.894704431569664,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.485442086998054,0.557216921387392,0,0.47748896947538,0.890894042497916,0.3071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| ||
|short_description=p9@SLC39A1 | |short_description=p9@SLC39A1 | ||
}} | }} |
Latest revision as of 07:53, 17 September 2015
Short description: | p9@SLC39A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC39A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000417348_5end |
EntrezGene: | SLC39A1 |
HGNC: | 12876 |
UniProt: | Q5T4K2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.20e-08 | 2 |
hair follicle cell | 1.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.64e-09 | 9 |
hair root sheath | 1.20e-08 | 2 |
hair outer root sheath | 1.20e-08 | 2 |
bulb of hair follicle | 1.20e-08 | 2 |
hair follicle | 1.79e-07 | 5 |
hair follicle placode | 1.79e-07 | 5 |