FFCP PHASE1:Hg19::chr6:25930819..25930838,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10246 | |EntrezGene=10246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10930 | |HGNC=10930 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000360488,uc003nfl.2_5end | |association_with_transcript=0bp_to_ENST00000360488,uc003nfl.2_5end | ||
|cluster_id=chr6:25930819..25930838,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_3_at_SLC17A2_5end | |description=CAGE_peak_3_at_SLC17A2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!1.94e-42!12;CL:0000417!1.94e-42!12;CL:0000668!1.94e-42!12;CL:0000414!1.94e-42!12;CL:0000412!1.94e-42!12;CL:0000182!1.94e-42!12;CL:0000223!2.42e-11!59 | |ontology_enrichment_celltype=CL:0000181!1.94e-42!12;CL:0000417!1.94e-42!12;CL:0000668!1.94e-42!12;CL:0000414!1.94e-42!12;CL:0000412!1.94e-42!12;CL:0000182!1.94e-42!12;CL:0000223!2.42e-11!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.48e-22;12 | |ontology_enrichment_celltype_v019=CL:0000182;5.48e-22;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.48e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.68e-11;11!UBERON:0009497;1.04e-09;13 | |ontology_enrichment_development_v019=UBERON:0004161;2.68e-11;11!UBERON:0009497;1.04e-09;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.56e-47!19;UBERON:0006925!2.56e-47!19;UBERON:0008836!2.56e-47!19;UBERON:0008835!8.38e-41!22;UBERON:0003894!8.38e-41!22;UBERON:0009854!5.23e-39!23;UBERON:0007499!7.55e-36!25;UBERON:0009497!7.55e-36!25;UBERON:0000015!7.55e-36!25;UBERON:0002423!7.55e-36!25;UBERON:0006235!7.55e-36!25;UBERON:0004161!7.55e-36!25;UBERON:0005057!1.89e-34!26;UBERON:0009856!1.89e-34!26;UBERON:0002365!8.27e-29!31;UBERON:0002330!8.27e-29!31;UBERON:0002368!1.88e-25!35;UBERON:0003929!1.57e-20!54;UBERON:0005172!3.94e-20!55;UBERON:0005173!3.94e-20!55;UBERON:0000949!1.15e-19!45;UBERON:0002417!4.51e-18!61;UBERON:0000916!4.51e-18!61;UBERON:0002530!7.63e-15!59;UBERON:0005911!3.12e-13!82;UBERON:0005177!6.35e-10!107;UBERON:0009569!2.40e-09!113;UBERON:0002405!4.33e-09!115;UBERON:0001041!1.20e-08!98;UBERON:0004921!5.29e-08!129;UBERON:0004185!5.29e-08!129;UBERON:0000490!1.75e-07!138;UBERON:0003914!4.76e-07!118 | |ontology_enrichment_uberon=UBERON:0002107!2.56e-47!19;UBERON:0006925!2.56e-47!19;UBERON:0008836!2.56e-47!19;UBERON:0008835!8.38e-41!22;UBERON:0003894!8.38e-41!22;UBERON:0009854!5.23e-39!23;UBERON:0007499!7.55e-36!25;UBERON:0009497!7.55e-36!25;UBERON:0000015!7.55e-36!25;UBERON:0002423!7.55e-36!25;UBERON:0006235!7.55e-36!25;UBERON:0004161!7.55e-36!25;UBERON:0005057!1.89e-34!26;UBERON:0009856!1.89e-34!26;UBERON:0002365!8.27e-29!31;UBERON:0002330!8.27e-29!31;UBERON:0002368!1.88e-25!35;UBERON:0003929!1.57e-20!54;UBERON:0005172!3.94e-20!55;UBERON:0005173!3.94e-20!55;UBERON:0000949!1.15e-19!45;UBERON:0002417!4.51e-18!61;UBERON:0000916!4.51e-18!61;UBERON:0002530!7.63e-15!59;UBERON:0005911!3.12e-13!82;UBERON:0005177!6.35e-10!107;UBERON:0009569!2.40e-09!113;UBERON:0002405!4.33e-09!115;UBERON:0001041!1.20e-08!98;UBERON:0004921!5.29e-08!129;UBERON:0004185!5.29e-08!129;UBERON:0000490!1.75e-07!138;UBERON:0003914!4.76e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-37;19!UBERON:0006925;1.91e-37;19!UBERON:0002423;1.35e-28;25!UBERON:0002365;4.28e-23;31!UBERON:0002330;4.28e-23;31!UBERON:0002368;5.99e-20;33!UBERON:0000949;1.80e-14;43!UBERON:0005172;1.96e-10;52!UBERON:0005173;1.96e-10;52!UBERON:0002417;4.64e-08;58!UBERON:0000916;4.64e-08;58!UBERON:0002530;1.30e-07;57!UBERON:0001007;1.71e-07;81 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-37;19!UBERON:0006925;1.91e-37;19!UBERON:0002423;1.35e-28;25!UBERON:0002365;4.28e-23;31!UBERON:0002330;4.28e-23;31!UBERON:0002368;5.99e-20;33!UBERON:0000949;1.80e-14;43!UBERON:0005172;1.96e-10;52!UBERON:0005173;1.96e-10;52!UBERON:0002417;4.64e-08;58!UBERON:0000916;4.64e-08;58!UBERON:0002530;1.30e-07;57!UBERON:0001007;1.71e-07;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.91e-37,19;UBERON:0006925,1.91e-37,19;UBERON:0008836,1.91e-37,19;UBERON:0008835,2.03e-32,22;UBERON:0003894,2.03e-32,22;UBERON:0009854,4.92e-31,23;UBERON:0007499,1.35e-28,25;UBERON:0009497,1.35e-28,25;UBERON:0000015,1.35e-28,25;UBERON:0002423,1.35e-28,25;UBERON:0006235,1.35e-28,25;UBERON:0004161,1.35e-28,25;UBERON:0009856,1.62e-27,26;UBERON:0002365,3.66e-23,31;UBERON:0002330,3.66e-23,31;UBERON:0002368,1.43e-20,35;UBERON:0000949,4.25e-16,45;UBERON:0003929,1.76e-13,54;UBERON:0005172,1.76e-13,54;UBERON:0005173,1.76e-13,54;UBERON:0002530,2.28e-12,59;UBERON:0002417,3.62e-12,60;UBERON:0000916,3.62e-12,60;UBERON:0005911,5.51e-09,82;UBERON:0001041,1.75e-08,87;UBERON:0005177,2.43e-07,101 | |||
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|short_description=p3@SLC17A2 | |short_description=p3@SLC17A2 | ||
}} | }} |
Latest revision as of 08:08, 17 September 2015
Short description: | p3@SLC17A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC17A2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000360488, uc003nfl.2_5end |
EntrezGene: | SLC17A2 |
HGNC: | 10930 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.48e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.91e-37 | 19 |
digestive gland | 1.91e-37 | 19 |
liver bud | 1.91e-37 | 19 |
hepatic diverticulum | 2.03e-32 | 22 |
liver primordium | 2.03e-32 | 22 |
digestive tract diverticulum | 4.92e-31 | 23 |
epithelial sac | 1.35e-28 | 25 |
epithelium of foregut-midgut junction | 1.35e-28 | 25 |
anatomical boundary | 1.35e-28 | 25 |
hepatobiliary system | 1.35e-28 | 25 |
foregut-midgut junction | 1.35e-28 | 25 |
septum transversum | 1.35e-28 | 25 |
sac | 1.62e-27 | 26 |
exocrine gland | 3.66e-23 | 31 |
exocrine system | 3.66e-23 | 31 |
endocrine gland | 1.43e-20 | 35 |
endocrine system | 4.25e-16 | 45 |
gut epithelium | 1.76e-13 | 54 |
abdomen element | 1.76e-13 | 54 |
abdominal segment element | 1.76e-13 | 54 |
gland | 2.28e-12 | 59 |
abdominal segment of trunk | 3.62e-12 | 60 |
abdomen | 3.62e-12 | 60 |
endo-epithelium | 5.51e-09 | 82 |
foregut | 1.75e-08 | 87 |
trunk region element | 2.43e-07 | 101 |