FFCP PHASE1:Hg19::chr2:43713806..43713820,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:43713806..43713820,- to FFCP PHASE1:Hg19::chr2:43713806..43713820,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=63892 | |EntrezGene=63892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19217 | |HGNC=19217 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000469323_5end | |||
|cluster_id=chr2:43713806..43713820,- | |||
|coexpression_cluster_id=C4230 | |||
|description=CAGE_peak_6_at_THADA_5end | |||
|id=chr2:43713806..43713820,- | |||
|ontology_enrichment_celltype=CL:0002194!1.51e-30!63;CL:0000576!1.51e-30!63;CL:0000040!1.51e-30!63;CL:0000559!1.51e-30!63;CL:0002009!2.38e-29!65;CL:0002057!4.27e-29!42;CL:0000860!1.08e-26!45;CL:0000839!1.19e-26!70;CL:0000557!3.70e-26!71;CL:0000766!1.04e-25!76;CL:0000763!1.06e-14!112;CL:0000049!1.06e-14!112;CL:0002087!2.42e-14!119;CL:0002031!2.02e-13!124;CL:0000738!7.39e-12!140;CL:0002032!8.35e-09!165;CL:0000837!8.35e-09!165;CL:0000037!4.02e-08!172;CL:0000566!4.02e-08!172;CL:0000875!1.25e-07!3;CL:0002396!1.25e-07!3;CL:0000988!3.01e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.42e-18;13!CL:0000182;2.49e-11;12!CL:0000473;5.08e-08;39!CL:0000234;5.08e-08;39!CL:0000860;7.04e-07;33!CL:0002057;7.04e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.31e-15,15;CL:0000182,2.28e-11,12;CL:0000473,2.64e-07,48;CL:0000234,2.64e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.72e-26!115;UBERON:0002371!8.26e-26!80;UBERON:0001474!2.20e-23!86;UBERON:0002390!2.00e-22!102;UBERON:0003061!2.00e-22!102;UBERON:0004765!1.85e-21!101;UBERON:0001434!1.85e-21!101;UBERON:0002193!7.22e-21!112;UBERON:0002204!9.50e-13!167;UBERON:0001044!2.86e-07!6;UBERON:0003293!2.86e-07!6;UBERON:0003294!2.86e-07!6;UBERON:0010047!2.86e-07!6;UBERON:0000167!2.86e-07!6;UBERON:0000926!8.72e-07!448;UBERON:0004120!8.72e-07!448;UBERON:0006603!8.72e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.15e-12;19!UBERON:0006925;2.15e-12;19!UBERON:0002423;1.75e-09;25!UBERON:0002365;6.13e-08;31!UBERON:0002330;6.13e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.99e-12,19;UBERON:0006925,1.99e-12,19;UBERON:0008836,1.99e-12,19;UBERON:0008835,9.06e-11,22;UBERON:0003894,9.06e-11,22;UBERON:0009854,2.60e-10,23;UBERON:0007499,1.66e-09,25;UBERON:0009497,1.66e-09,25;UBERON:0000015,1.66e-09,25;UBERON:0002423,1.66e-09,25;UBERON:0006235,1.66e-09,25;UBERON:0004161,1.66e-09,25;UBERON:0009856,3.77e-09,26;UBERON:0002365,1.04e-07,31;UBERON:0002330,1.04e-07,31;UBERON:0002368,7.53e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0.515151135268373,0.436194716338694,1.13362783106643,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0.768482119587302,0,1.37898272294647,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0.659702600373432,1.19678194572979,0,0.290209238628584,0,0.622822248995575,2.26123798731069,0,0.65156653411535,0,0,0.316462387440884,0.422510572623884,0,0,0.673971786878971,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,1.96565443335525,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0.601892199455438,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.37934295539728,0,0.129282956361551,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,1.63205341010842,2.2562090462043,6.12691153526923,4.91808946064707,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.828864656652147,0.51215543128185,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0.386747327841463,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.190941474834495,0,0,0,0.134704106029175,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0.515151135268373,0.436194716338694,1.13362783106643,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0.768482119587302,0,1.37898272294647,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0.659702600373432,1.19678194572979,0,0.290209238628584,0,0.622822248995575,2.26123798731069,0,0.65156653411535,0,0,0.316462387440884,0.422510572623884,0,0,0.673971786878971,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,1.96565443335525,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0.601892199455438,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.37934295539728,0,0.129282956361551,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,1.63205341010842,2.2562090462043,6.12691153526923,4.91808946064707,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.828864656652147,0.51215543128185,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0.386747327841463,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.190941474834495,0,0,0,0.134704106029175,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@THADA | |||
}} | }} |
Latest revision as of 08:28, 17 September 2015
Short description: | p6@THADA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_THADA_5end |
Coexpression cluster: | C4230_liver_mature_Hepatocyte_adipose_CD14_trachea_Macrophage |
Association with transcript: | 0bp_to_ENST00000469323_5end |
EntrezGene: | THADA |
HGNC: | 19217 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.31e-15 | 15 |
hepatocyte | 2.28e-11 | 12 |
defensive cell | 2.64e-07 | 48 |
phagocyte | 2.64e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
liver | 1.99e-12 | 19 |
digestive gland | 1.99e-12 | 19 |
liver bud | 1.99e-12 | 19 |
hepatic diverticulum | 9.06e-11 | 22 |
liver primordium | 9.06e-11 | 22 |
digestive tract diverticulum | 2.60e-10 | 23 |
epithelial sac | 1.66e-09 | 25 |
epithelium of foregut-midgut junction | 1.66e-09 | 25 |
anatomical boundary | 1.66e-09 | 25 |
hepatobiliary system | 1.66e-09 | 25 |
foregut-midgut junction | 1.66e-09 | 25 |
septum transversum | 1.66e-09 | 25 |
sac | 3.77e-09 | 26 |
exocrine gland | 1.04e-07 | 31 |
exocrine system | 1.04e-07 | 31 |
endocrine gland | 7.53e-07 | 35 |