FFCP PHASE1:Hg19::chr2:44502597..44502609,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6519 | |EntrezGene=6519 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11025 | |HGNC=11025 | ||
|TSSclassifier=strong | |||
|UniProt=Q07837,B8ZZK1,Q4J6B8,Q4J6B6,Q4J6B5 | |UniProt=Q07837,B8ZZK1,Q4J6B8,Q4J6B6,Q4J6B5 | ||
|association_with_transcript=0bp_to_ENST00000260649,ENST00000409387,NM_000341,uc002rty.2,uc002rtz.2,uc002rua.2,uc002rub.2,uc002ruc.3_5end | |||
|cluster_id=chr2:44502597..44502609,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_2_at_SLC3A1_5end | |||
|id=chr2:44502597..44502609,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.41e-08!12;CL:0000417!1.41e-08!12;CL:0000668!1.41e-08!12;CL:0000414!1.41e-08!12;CL:0000412!1.41e-08!12;CL:0000182!1.41e-08!12;CL:0002322!9.72e-08!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.48e-11;11!UBERON:0003104;2.57e-11;31!UBERON:0009497;1.30e-09;13!UBERON:0006242;4.19e-09;1!UBERON:0003918;9.74e-08;10!UBERON:0007687;9.74e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.26e-16!27;UBERON:0005409!1.43e-14!35;UBERON:0005172!7.24e-12!55;UBERON:0005173!7.24e-12!55;UBERON:0001155!1.88e-11!9;UBERON:0002417!2.14e-10!61;UBERON:0000916!2.14e-10!61;UBERON:0000059!2.57e-09!11;UBERON:0004921!3.38e-08!129;UBERON:0004185!3.38e-08!129;UBERON:0009854!5.05e-08!23;UBERON:0007023!2.02e-07!115;UBERON:0002107!2.04e-07!19;UBERON:0006925!2.04e-07!19;UBERON:0008836!2.04e-07!19;UBERON:0009497!2.22e-07!25;UBERON:0000015!2.22e-07!25;UBERON:0002423!2.22e-07!25;UBERON:0006235!2.22e-07!25;UBERON:0004161!2.22e-07!25;UBERON:0002108!3.47e-07!14;UBERON:0003929!4.52e-07!54;UBERON:0009856!5.50e-07!26;UBERON:0001007!5.96e-07!155;UBERON:0001555!5.96e-07!155;UBERON:0007026!5.96e-07!155;UBERON:0005057!6.64e-07!26;UBERON:0004119!9.19e-07!169;UBERON:0000925!9.19e-07!169;UBERON:0006595!9.19e-07!169;UBERON:0002113!9.85e-07!27;UBERON:0003918!9.85e-07!27;UBERON:0005095!9.85e-07!27;UBERON:0007687!9.85e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.10e-15;17!UBERON:0002108;6.44e-15;4!UBERON:0005409;8.09e-12;22!UBERON:0001301;5.98e-09;1!UBERON:0006834;9.53e-09;1!UBERON:0002423;1.80e-07;25!UBERON:0004921;3.44e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.14e-15,17;UBERON:0002108,6.59e-15,4;UBERON:0005409,2.16e-10,25;UBERON:0005172,3.21e-10,54;UBERON:0005173,3.21e-10,54;UBERON:0002417,4.61e-09,60;UBERON:0000916,4.61e-09,60;UBERON:0001301,6.22e-09,1;UBERON:0006834,7.85e-09,1;UBERON:0009497,1.84e-07,25;UBERON:0000015,1.84e-07,25;UBERON:0002423,1.84e-07,25;UBERON:0006235,1.84e-07,25;UBERON:0004161,1.84e-07,25;UBERON:0005177,2.22e-07,101 | |||
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| ||
|short_description=p2@SLC3A1 | |||
}} | }} |
Latest revision as of 08:52, 17 September 2015
Short description: | p2@SLC3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC3A1_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_ENST00000260649, ENST00000409387, NM_000341, uc002rty.2, uc002rtz.2, uc002rua.2, uc002rub.2, uc002ruc.3_5end |
EntrezGene: | SLC3A1 |
HGNC: | 11025 |
UniProt: | Q07837B8ZZK1Q4J6B8Q4J6B6Q4J6B5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.14e-15 | 17 |
small intestine | 6.59e-15 | 4 |
gastrointestinal system | 2.16e-10 | 25 |
abdomen element | 3.21e-10 | 54 |
abdominal segment element | 3.21e-10 | 54 |
abdominal segment of trunk | 4.61e-09 | 60 |
abdomen | 4.61e-09 | 60 |
epididymis | 6.22e-09 | 1 |
uterus or analog | 7.85e-09 | 1 |
epithelium of foregut-midgut junction | 1.84e-07 | 25 |
anatomical boundary | 1.84e-07 | 25 |
hepatobiliary system | 1.84e-07 | 25 |
foregut-midgut junction | 1.84e-07 | 25 |
septum transversum | 1.84e-07 | 25 |
trunk region element | 2.22e-07 | 101 |