FFCP PHASE1:Hg19::chr3:189027876..189027892,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285386 | |EntrezGene=285386 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24759 | |HGNC=24759 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=193bp_to_ENST00000481307_5end | |association_with_transcript=193bp_to_ENST00000481307_5end | ||
|cluster_id=chr3:189027876..189027892,+ | |||
|description=CAGE_peak_1_at_TPRG1_5end | |description=CAGE_peak_1_at_TPRG1_5end | ||
|id=chr3:189027876..189027892,+ | |id=chr3:189027876..189027892,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.30e-33!43;CL:0000223!2.41e-27!59;CL:0002368!1.42e-21!13;CL:0000066!3.22e-18!254;CL:0002251!5.89e-16!21;CL:0002159!3.95e-14!13;CL:0002202!5.40e-14!9;CL:0002632!5.40e-14!9;CL:0002077!1.52e-08!33;CL:0002327!2.47e-08!4;CL:0000076!3.38e-08!62;CL:0000068!1.98e-07!3;CL:0000069!1.98e-07!3;CL:0000307!1.98e-07!3;CL:0000377!1.98e-07!3;CL:0002328!2.88e-07!3;CL:0002166!8.22e-07!3;CL:0000622!9.97e-07!5 | |ontology_enrichment_celltype=CL:0002076!3.30e-33!43;CL:0000223!2.41e-27!59;CL:0002368!1.42e-21!13;CL:0000066!3.22e-18!254;CL:0002251!5.89e-16!21;CL:0002159!3.95e-14!13;CL:0002202!5.40e-14!9;CL:0002632!5.40e-14!9;CL:0002077!1.52e-08!33;CL:0002327!2.47e-08!4;CL:0000076!3.38e-08!62;CL:0000068!1.98e-07!3;CL:0000069!1.98e-07!3;CL:0000307!1.98e-07!3;CL:0000377!1.98e-07!3;CL:0002328!2.88e-07!3;CL:0002166!8.22e-07!3;CL:0000622!9.97e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002368;4.29e-32;13!CL:0002076;4.28e-31;42!CL:0002159;1.16e-22;14!CL:0002202;5.36e-19;9!CL:0002632;5.36e-19;9!CL:0002251;2.96e-13;20!CL:0000307;5.61e-12;3!CL:0002328;1.50e-11;3!CL:0000622;5.90e-11;5!CL:0002166;8.77e-11;3!CL:0002077;1.65e-10;34!CL:0000240;1.36e-09;6!CL:0000311;1.36e-09;6!CL:0000079;1.36e-09;6!CL:0000237;1.36e-09;6!CL:0000362;3.73e-09;9!CL:0000154;3.81e-09;6!CL:0000575;1.61e-08;2!CL:0000317;1.38e-07;2!CL:1000448;1.38e-07;2!CL:0002308;1.38e-07;2!CL:0002140;1.38e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.97e-40,42;CL:0000223,5.83e-33,58;CL:0002368,4.86e-32,13;CL:0000066,9.86e-24,253;CL:0002159,9.56e-23,14;CL:0002202,6.00e-19,9;CL:0002632,6.00e-19,9;CL:0002251,2.62e-13,20;CL:0000076,1.34e-12,63;CL:0002077,4.00e-12,34;CL:0000068,6.16e-12,3;CL:0000069,6.16e-12,3;CL:0000307,6.16e-12,3;CL:0000377,6.16e-12,3;CL:0002328,1.19e-11,3;CL:0002321,1.62e-11,250;CL:0000622,5.30e-11,5;CL:0002166,7.51e-11,3;CL:0000240,1.28e-09,6;CL:0000311,1.28e-09,6;CL:0000079,1.28e-09,6;CL:0000237,1.28e-09,6;CL:0000036,1.28e-09,6;CL:0000357,1.28e-09,6;CL:0000114,1.28e-09,6;CL:0000362,3.44e-09,9;CL:0000154,3.48e-09,6;CL:0000575,1.67e-08,2;CL:0000317,1.29e-07,2;CL:1000448,1.29e-07,2;CL:0002308,1.29e-07,2;CL:0002140,1.29e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;1.02e-16;58!CL:0000377;5.61e-12;3!CL:0000357;1.36e-09;6!CL:0000114;1.36e-09;6!UBERON:0008814;6.85e-08;2!UBERON:0010056;6.85e-08;2 | |||
|ontology_enrichment_disease=DOID:1749!1.67e-19!14 | |ontology_enrichment_disease=DOID:1749!1.67e-19!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.72e-20;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.22e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!8.67e-18!72;UBERON:0004119!3.92e-16!169;UBERON:0000925!3.92e-16!169;UBERON:0006595!3.92e-16!169;UBERON:0000065!2.07e-13!53;UBERON:0007196!7.38e-13!14;UBERON:0001558!7.38e-13!14;UBERON:0000161!2.78e-12!35;UBERON:0001007!3.06e-11!155;UBERON:0001555!3.06e-11!155;UBERON:0007026!3.06e-11!155;UBERON:0000166!3.45e-11!21;UBERON:0003729!3.64e-11!5;UBERON:0000344!5.20e-10!12;UBERON:0005178!2.20e-09!34;UBERON:0002224!2.20e-09!34;UBERON:0000165!2.93e-09!28;UBERON:0000930!2.93e-09!28;UBERON:0003343!3.81e-09!4;UBERON:0004785!3.81e-09!4;UBERON:0000072!4.85e-09!46;UBERON:0005181!5.22e-09!35;UBERON:0004921!1.16e-08!129;UBERON:0004185!1.16e-08!129;UBERON:0001911!2.47e-08!4;UBERON:0005333!2.47e-08!4;UBERON:0008425!2.47e-08!4;UBERON:0005311!2.47e-08!4;UBERON:0005153!3.16e-08!37;UBERON:0000077!7.29e-08!130;UBERON:0001041!7.96e-08!98;UBERON:0001444!1.05e-07!48;UBERON:0006562!1.28e-07!11;UBERON:0003102!2.08e-07!95;UBERON:0003126!2.58e-07!7;UBERON:0001005!2.58e-07!7;UBERON:0004815!2.88e-07!3;UBERON:0002031!2.88e-07!3;UBERON:0000365!4.32e-07!5;UBERON:0004807!4.90e-07!28;UBERON:0005157!6.27e-07!51 | |ontology_enrichment_uberon=UBERON:0001004!8.67e-18!72;UBERON:0004119!3.92e-16!169;UBERON:0000925!3.92e-16!169;UBERON:0006595!3.92e-16!169;UBERON:0000065!2.07e-13!53;UBERON:0007196!7.38e-13!14;UBERON:0001558!7.38e-13!14;UBERON:0000161!2.78e-12!35;UBERON:0001007!3.06e-11!155;UBERON:0001555!3.06e-11!155;UBERON:0007026!3.06e-11!155;UBERON:0000166!3.45e-11!21;UBERON:0003729!3.64e-11!5;UBERON:0000344!5.20e-10!12;UBERON:0005178!2.20e-09!34;UBERON:0002224!2.20e-09!34;UBERON:0000165!2.93e-09!28;UBERON:0000930!2.93e-09!28;UBERON:0003343!3.81e-09!4;UBERON:0004785!3.81e-09!4;UBERON:0000072!4.85e-09!46;UBERON:0005181!5.22e-09!35;UBERON:0004921!1.16e-08!129;UBERON:0004185!1.16e-08!129;UBERON:0001911!2.47e-08!4;UBERON:0005333!2.47e-08!4;UBERON:0008425!2.47e-08!4;UBERON:0005311!2.47e-08!4;UBERON:0005153!3.16e-08!37;UBERON:0000077!7.29e-08!130;UBERON:0001041!7.96e-08!98;UBERON:0001444!1.05e-07!48;UBERON:0006562!1.28e-07!11;UBERON:0003102!2.08e-07!95;UBERON:0003126!2.58e-07!7;UBERON:0001005!2.58e-07!7;UBERON:0004815!2.88e-07!3;UBERON:0002031!2.88e-07!3;UBERON:0000365!4.32e-07!5;UBERON:0004807!4.90e-07!28;UBERON:0005157!6.27e-07!51 | ||
|ontology_enrichment_uberon_v019=UBERON:0007196;4.12e-14;15!UBERON:0001558;4.12e-14;15!UBERON:0004815;1.50e-11;3!UBERON:0002031;1.50e-11;3!UBERON:0003343;2.72e-09;4!UBERON:0004785;2.72e-09;4!UBERON:0003126;1.55e-08;7!UBERON:0001005;1.55e-08;7!UBERON:0001708;3.36e-08;4!UBERON:0008895;3.36e-08;4!UBERON:0002419;1.38e-07;2!UBERON:0007771;1.38e-07;2!UBERON:0003297;1.38e-07;2!UBERON:0001821;1.38e-07;2!UBERON:0003487;1.38e-07;2!UBERON:0001820;1.38e-07;2!UBERON:0000365;3.54e-07;5!UBERON:0002185;4.33e-07;5!UBERON:0003729;5.42e-07;13!UBERON:0000165;5.86e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,4.94e-14,15;UBERON:0001558,4.94e-14,15;UBERON:0001004,6.97e-13,74;UBERON:0003102,7.18e-12,99;UBERON:0004815,1.19e-11,3;UBERON:0002031,1.19e-11,3;UBERON:0004119,1.19e-10,160;UBERON:0000925,1.19e-10,160;UBERON:0006595,1.19e-10,160;UBERON:0000065,7.13e-10,54;UBERON:0003343,2.88e-09,4;UBERON:0004785,2.88e-09,4;UBERON:0003126,1.83e-08,7;UBERON:0001005,1.83e-08,7;UBERON:0001708,2.99e-08,4;UBERON:0008895,2.99e-08,4;UBERON:0000161,4.46e-08,36;UBERON:0000033,6.11e-08,56;UBERON:0002419,1.29e-07,2;UBERON:0007771,1.29e-07,2;UBERON:0003297,1.29e-07,2;UBERON:0001821,1.29e-07,2;UBERON:0003487,1.29e-07,2;UBERON:0001820,1.29e-07,2;UBERON:0005089,1.29e-07,2;UBERON:0005088,1.29e-07,2;UBERON:0000365,3.33e-07,5;UBERON:0002185,3.78e-07,5;UBERON:0000166,4.54e-07,22;UBERON:0003729,5.08e-07,13;UBERON:0005178,6.01e-07,34;UBERON:0002224,6.01e-07,34;UBERON:0000153,6.51e-07,62;UBERON:0007811,6.51e-07,62;UBERON:0000165,9.91e-07,29;UBERON:0000930,9.91e-07,29 | |||
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| ||
|short_description=p1@TPRG1 | |short_description=p1@TPRG1 | ||
}} | }} |
Latest revision as of 09:01, 17 September 2015
Short description: | p1@TPRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPRG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 193bp_to_ENST00000481307_5end |
EntrezGene: | TPRG1 |
HGNC: | 24759 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 4.94e-14 | 15 |
lower respiratory tract | 4.94e-14 | 15 |
respiratory system | 6.97e-13 | 74 |
surface structure | 7.18e-12 | 99 |
lower respiratory tract epithelium | 1.19e-11 | 3 |
epithelium of bronchus | 1.19e-11 | 3 |
endoderm-derived structure | 1.19e-10 | 160 |
endoderm | 1.19e-10 | 160 |
presumptive endoderm | 1.19e-10 | 160 |
respiratory tract | 7.13e-10 | 54 |
mucosa of oral region | 2.88e-09 | 4 |
respiratory system mucosa | 2.88e-09 | 4 |
trachea | 1.83e-08 | 7 |
respiratory airway | 1.83e-08 | 7 |
jaw skeleton | 2.99e-08 | 4 |
splanchnocranium | 2.99e-08 | 4 |
orifice | 4.46e-08 | 36 |
head | 6.11e-08 | 56 |
skin gland | 1.29e-07 | 2 |
epidermis gland | 1.29e-07 | 2 |
gland of integumental system | 1.29e-07 | 2 |
sebaceous gland | 1.29e-07 | 2 |
skin sebaceous gland | 1.29e-07 | 2 |
sweat gland | 1.29e-07 | 2 |
sweat gland placode | 1.29e-07 | 2 |
sebaceous gland placode | 1.29e-07 | 2 |
urothelium | 3.33e-07 | 5 |
bronchus | 3.78e-07 | 5 |
oral opening | 4.54e-07 | 22 |
mouth mucosa | 5.08e-07 | 13 |
thoracic cavity element | 6.01e-07 | 34 |
thoracic cavity | 6.01e-07 | 34 |
anterior region of body | 6.51e-07 | 62 |
craniocervical region | 6.51e-07 | 62 |
mouth | 9.91e-07 | 29 |
stomodeum | 9.91e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.22e-20 | 14 |