FFCP PHASE1:Hg19::chr16:66968055..66968079,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:66968055..66968079,-
|short_description=p3@FAM96B
|description=CAGE_peak_3_at_FAM96B_5end
|association_with_transcript=240bp_to_NR_024525_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51647 | |EntrezGene=51647 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24261 | |HGNC=24261 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=240bp_to_NR_024525_5end | |||
|cluster_id=chr16:66968055..66968079,- | |||
|description=CAGE_peak_3_at_FAM96B_5end | |||
|id=chr16:66968055..66968079,- | |||
|ontology_enrichment_celltype=CL:0000222!4.10e-15!119;CL:0002139!1.13e-10!24;CL:0000115!3.46e-09!35;CL:0002078!4.55e-09!44;CL:0000213!7.13e-09!57;CL:0000215!7.13e-09!57;CL:0000071!1.28e-07!18;CL:0002546!1.28e-07!18;CL:0000183!1.38e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.49e-16;24!CL:0000115;4.29e-13;36!CL:0000071;2.23e-10;18!CL:0002078;6.35e-10;45!CL:1000413;7.25e-09;9!CL:0000097;5.66e-08;5!CL:0000213;1.13e-07;58!CL:0000215;1.13e-07;58!CL:0002138;1.74e-07;6!CL:0000163;1.90e-07;9!CL:0002188;9.11e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.04e-16,24;CL:0000115,6.09e-16,36;CL:0000222,2.50e-14,121;CL:0002078,7.92e-14,45;CL:0000213,1.22e-12,58;CL:0000215,1.22e-12,58;CL:0000071,1.16e-10,18;CL:0002546,1.16e-10,18;CL:1000413,6.91e-09,9;CL:0000097,2.66e-08,5;CL:0002028,2.66e-08,5;CL:0005020,4.11e-08,6;CL:0002138,4.11e-08,6;CL:0005022,4.11e-08,6;CL:0000163,6.95e-08,9;CL:0002188,8.70e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.23e-10;18!CL:0005022;1.74e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.47e-11!69;UBERON:0002049!4.03e-11!79;UBERON:0007798!4.03e-11!79;UBERON:0004535!4.75e-10!110;UBERON:0001009!8.58e-10!113;UBERON:0001981!2.15e-09!60;UBERON:0007500!2.15e-09!60;UBERON:0004537!2.15e-09!60;UBERON:0006965!2.15e-09!60;UBERON:0004872!4.49e-08!84;UBERON:0001637!4.91e-08!42;UBERON:0003509!4.91e-08!42;UBERON:0004572!4.91e-08!42;UBERON:0003914!5.50e-08!118;UBERON:0001986!1.28e-07!18;UBERON:0004638!1.28e-07!18;UBERON:0004852!1.28e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.23e-10;18!UBERON:0001986;2.23e-10;18!UBERON:0004852;2.23e-10;18!UBERON:0003915;7.25e-09;9!UBERON:0004700;7.25e-09;9!UBERON:0001917;7.25e-09;9!UBERON:0001637;7.42e-08;42!UBERON:0003509;7.42e-08;42!UBERON:0004572;7.42e-08;42!UBERON:0000487;7.96e-08;22!UBERON:0000055;1.02e-07;65!UBERON:0001473;4.04e-07;8!UBERON:0004536;4.04e-07;8!UBERON:0006558;4.04e-07;8!UBERON:0004573;6.63e-07;33!UBERON:0004571;6.63e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,5.80e-13,68;UBERON:0002049,1.42e-11,78;UBERON:0007798,1.42e-11,78;UBERON:0004535,1.74e-11,109;UBERON:0001009,7.60e-11,112;UBERON:0004638,1.16e-10,18;UBERON:0001986,1.16e-10,18;UBERON:0004852,1.16e-10,18;UBERON:0001637,4.60e-09,42;UBERON:0003509,4.60e-09,42;UBERON:0004572,4.60e-09,42;UBERON:0003914,5.24e-09,117;UBERON:0007500,6.51e-09,59;UBERON:0001981,6.51e-09,59;UBERON:0004537,6.51e-09,59;UBERON:0006965,6.51e-09,59;UBERON:0003915,6.91e-09,9;UBERON:0004700,6.91e-09,9;UBERON:0001917,6.91e-09,9;UBERON:0000487,4.80e-08,22;UBERON:0001473,1.04e-07,8;UBERON:0004536,1.04e-07,8;UBERON:0006558,1.04e-07,8;UBERON:0004872,3.32e-07,83;UBERON:0004573,3.78e-07,33;UBERON:0004571,3.78e-07,33;UBERON:0000490,5.16e-07,148;UBERON:0007503,5.89e-07,78 | |||
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| ||
|short_description=p3@FAM96B | |||
}} | }} |
Latest revision as of 09:07, 17 September 2015
Short description: | p3@FAM96B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM96B_5end |
Coexpression cluster: | NA |
Association with transcript: | 240bp_to_NR_024525_5end |
EntrezGene: | FAM96B |
HGNC: | 24261 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.04e-16 | 24 |
endothelial cell | 6.09e-16 | 36 |
mesodermal cell | 2.50e-14 | 121 |
meso-epithelial cell | 7.92e-14 | 45 |
lining cell | 1.22e-12 | 58 |
barrier cell | 1.22e-12 | 58 |
blood vessel endothelial cell | 1.16e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.16e-10 | 18 |
endothelial cell of artery | 6.91e-09 | 9 |
mast cell | 2.66e-08 | 5 |
basophil mast progenitor cell | 2.66e-08 | 5 |
lymphangioblast | 4.11e-08 | 6 |
endothelial cell of lymphatic vessel | 4.11e-08 | 6 |
vascular lymphangioblast | 4.11e-08 | 6 |
endocrine cell | 6.95e-08 | 9 |
glomerular endothelial cell | 8.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
vessel | 5.80e-13 | 68 |
vasculature | 1.42e-11 | 78 |
vascular system | 1.42e-11 | 78 |
cardiovascular system | 1.74e-11 | 109 |
circulatory system | 7.60e-11 | 112 |
blood vessel endothelium | 1.16e-10 | 18 |
endothelium | 1.16e-10 | 18 |
cardiovascular system endothelium | 1.16e-10 | 18 |
artery | 4.60e-09 | 42 |
arterial blood vessel | 4.60e-09 | 42 |
arterial system | 4.60e-09 | 42 |
epithelial tube | 5.24e-09 | 117 |
epithelial tube open at both ends | 6.51e-09 | 59 |
blood vessel | 6.51e-09 | 59 |
blood vasculature | 6.51e-09 | 59 |
vascular cord | 6.51e-09 | 59 |
endothelial tube | 6.91e-09 | 9 |
arterial system endothelium | 6.91e-09 | 9 |
endothelium of artery | 6.91e-09 | 9 |
simple squamous epithelium | 4.80e-08 | 22 |
lymphatic vessel | 1.04e-07 | 8 |
lymph vasculature | 1.04e-07 | 8 |
lymphatic part of lymphoid system | 1.04e-07 | 8 |
splanchnic layer of lateral plate mesoderm | 3.32e-07 | 83 |
systemic artery | 3.78e-07 | 33 |
systemic arterial system | 3.78e-07 | 33 |
unilaminar epithelium | 5.16e-07 | 148 |
epithelial vesicle | 5.89e-07 | 78 |