FFCP PHASE1:Hg19::chr1:28503711..28503731,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5724 | |EntrezGene=5724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9582 | |HGNC=9582 | ||
|TSSclassifier=strong | |||
|UniProt=P25105 | |UniProt=P25105 | ||
|association_with_transcript=-12bp_to_ENST00000373857_5end | |association_with_transcript=-12bp_to_ENST00000373857_5end | ||
|cluster_id=chr1:28503711..28503731,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_6_at_PTAFR_5end | |description=CAGE_peak_6_at_PTAFR_5end | ||
|id=chr1:28503711..28503731,- | |id=chr1:28503711..28503731,- | ||
|ontology_enrichment_celltype=CL:0000945!4.51e-11!24;CL:0000826!4.51e-11!24;CL:0002274!1.52e-10!5;CL:0000457!1.52e-10!5;CL:0002191!1.52e-10!5;CL:0000097!1.52e-10!5;CL:0000831!1.52e-10!5;CL:0002028!1.52e-10!5;CL:0000037!3.07e-10!172;CL:0000566!3.07e-10!172;CL:0002032!3.47e-10!165;CL:0000837!3.47e-10!165;CL:0000988!3.09e-09!182;CL:0002031!1.40e-07!124;CL:0000738!1.54e-07!140;CL:0000785!2.58e-07!2;CL:0000955!2.58e-07!2;CL:0000818!2.58e-07!2;CL:0000954!2.58e-07!2;CL:0000816!2.58e-07!2 | |ontology_enrichment_celltype=CL:0000945!4.51e-11!24;CL:0000826!4.51e-11!24;CL:0002274!1.52e-10!5;CL:0000457!1.52e-10!5;CL:0002191!1.52e-10!5;CL:0000097!1.52e-10!5;CL:0000831!1.52e-10!5;CL:0002028!1.52e-10!5;CL:0000037!3.07e-10!172;CL:0000566!3.07e-10!172;CL:0002032!3.47e-10!165;CL:0000837!3.47e-10!165;CL:0000988!3.09e-09!182;CL:0002031!1.40e-07!124;CL:0000738!1.54e-07!140;CL:0000785!2.58e-07!2;CL:0000955!2.58e-07!2;CL:0000818!2.58e-07!2;CL:0000954!2.58e-07!2;CL:0000816!2.58e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.12e-42;5!CL:0000945;8.43e-27;24!CL:0000163;1.14e-23;9!CL:0000946;1.07e-14;1!CL:0000786;1.07e-14;1!CL:0000151;8.85e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.80e-42,5;CL:0002028,2.80e-42,5;CL:0000945,7.80e-27,24;CL:0000826,7.80e-27,24;CL:0000163,1.07e-23,9;CL:0000946,1.07e-14,1;CL:0000786,1.07e-14,1;CL:0000980,1.07e-14,1;CL:0002032,1.45e-14,161;CL:0000837,1.45e-14,161;CL:0000037,6.76e-14,168;CL:0000988,4.09e-13,177;CL:0000838,4.00e-12,52;CL:0002031,4.49e-12,120;CL:0000542,6.94e-12,53;CL:0000051,6.94e-12,53;CL:0000738,1.64e-10,136;CL:0000151,3.67e-09,36;CL:0000785,5.37e-08,2;CL:0000955,5.37e-08,2;CL:0000818,5.37e-08,2;CL:0000954,5.37e-08,2;CL:0000816,5.37e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000954;5.37e-08;2 | |||
|ontology_enrichment_disease=DOID:74!2.74e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:2355;7.13e-15;1!DOID:74;4.38e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,7.13e-15,1;DOID:74,4.38e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.46e-15!57;UBERON:0005068!4.46e-15!57;UBERON:0006241!4.46e-15!57;UBERON:0007135!4.46e-15!57;UBERON:0002020!5.74e-12!34;UBERON:0003528!5.74e-12!34;UBERON:0001893!8.83e-12!34;UBERON:0001017!3.66e-11!82;UBERON:0001950!3.87e-11!20;UBERON:0000200!4.71e-11!6;UBERON:0001869!6.80e-11!32;UBERON:0002780!8.95e-11!41;UBERON:0001890!8.95e-11!41;UBERON:0006240!8.95e-11!41;UBERON:0002791!1.74e-10!33;UBERON:0003080!1.91e-10!42;UBERON:0005743!2.09e-10!86;UBERON:0002619!5.37e-10!22;UBERON:0002616!5.74e-10!59;UBERON:0002240!2.86e-09!3;UBERON:0000073!6.10e-09!94;UBERON:0001016!6.10e-09!94;UBERON:0000955!6.60e-09!69;UBERON:0006238!6.60e-09!69;UBERON:0002771!9.55e-09!3;UBERON:0000956!1.28e-08!25;UBERON:0000203!1.28e-08!25;UBERON:0003075!2.20e-08!86;UBERON:0007284!2.20e-08!86;UBERON:0007023!2.63e-08!115;UBERON:0002346!8.26e-08!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.2133285992523,29.9667151492302,41.480581752309,0,0,0,0,0,0,0,2.55904618477359,0,0,0,0,0,0.32389366601898,0.515151135268373,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0.852449501065388,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,7.30802002309776,2.69526550203004,1.15295962733569,1.76739406796932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23408681925858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14117339516596,0,0,0,7.22646337966648,0.80719882876419,0.425846237690326,0,0,0,0,0.781552381608161,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,1.96935688737711,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.941881538370149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.696726401749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0,0,0,0,0,3.11131766400604,0,0,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p6@PTAFR | |short_description=p6@PTAFR | ||
}} | }} |
Latest revision as of 09:59, 17 September 2015
Short description: | p6@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PTAFR_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -12bp_to_ENST00000373857_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | P25105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.80e-42 | 5 |
basophil mast progenitor cell | 2.80e-42 | 5 |
lymphocyte of B lineage | 7.80e-27 | 24 |
pro-B cell | 7.80e-27 | 24 |
endocrine cell | 1.07e-23 | 9 |
antibody secreting cell | 1.07e-14 | 1 |
plasma cell | 1.07e-14 | 1 |
plasmablast | 1.07e-14 | 1 |
hematopoietic oligopotent progenitor cell | 1.45e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-14 | 161 |
hematopoietic stem cell | 6.76e-14 | 168 |
hematopoietic cell | 4.09e-13 | 177 |
lymphoid lineage restricted progenitor cell | 4.00e-12 | 52 |
hematopoietic lineage restricted progenitor cell | 4.49e-12 | 120 |
lymphocyte | 6.94e-12 | 53 |
common lymphoid progenitor | 6.94e-12 | 53 |
leukocyte | 1.64e-10 | 136 |
secretory cell | 3.67e-09 | 36 |
mature B cell | 5.37e-08 | 2 |
pre-B-II cell | 5.37e-08 | 2 |
transitional stage B cell | 5.37e-08 | 2 |
small pre-B-II cell | 5.37e-08 | 2 |
immature B cell | 5.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
anemia | 7.13e-15 | 1 |
hematopoietic system disease | 4.38e-08 | 2 |