FFCP PHASE1:Hg19::chr9:37027156..37027193,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5079 | |EntrezGene=5079 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8619 | |HGNC=8619 | ||
|TSSclassifier=strong | |||
|UniProt=Q93057 | |UniProt=Q93057 | ||
|association_with_transcript=-437bp_to_U62539_5end | |||
|cluster_id=chr9:37027156..37027193,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_PAX5_5end | |||
|id=chr9:37027156..37027193,- | |||
|ontology_enrichment_celltype=CL:0000945!2.17e-48!24;CL:0000826!2.17e-48!24;CL:0000236!2.60e-32!14;CL:0000542!1.53e-23!53;CL:0000051!1.53e-23!53;CL:0000838!3.92e-22!52;CL:0002087!1.09e-12!119;CL:0000738!3.64e-10!140;CL:0000037!2.97e-09!172;CL:0000566!2.97e-09!172;CL:0002031!1.61e-08!124;CL:0000988!3.22e-08!182;CL:0002032!4.91e-08!165;CL:0000837!4.91e-08!165;CL:0000817!4.93e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.47e-97;24!CL:0000236;1.01e-59;13!CL:0000542;3.68e-34;53!CL:0002087;2.21e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.18e-97,24;CL:0000826,2.18e-97,24;CL:0000236,4.90e-64,14;CL:0000542,7.94e-53,53;CL:0000051,7.94e-53,53;CL:0000838,8.34e-50,52;CL:0002087,1.42e-22,115;CL:0002031,1.24e-19,120;CL:0000738,3.82e-18,136;CL:0002032,4.53e-17,161;CL:0000837,4.53e-17,161;CL:0000037,4.35e-16,168;CL:0000988,6.12e-15,177;CL:0000817,1.19e-14,3;CL:0000785,1.93e-10,2;CL:0000955,1.93e-10,2;CL:0000818,1.93e-10,2;CL:0000954,1.93e-10,2;CL:0000816,1.93e-10,2 | |||
|ontology_enrichment_development_v019=CL:0000051;3.68e-34;53!UBERON:0004872;1.79e-10;7!CL:0000954;2.02e-10;2 | |||
|ontology_enrichment_disease=DOID:0060058!6.49e-11!10;DOID:2531!1.72e-08!51;DOID:0060083!1.72e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.56e-21;10!DOID:2531;2.64e-07;51!DOID:0060083;2.64e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.56e-21,10;DOID:2531,6.00e-12,51;DOID:0060083,6.00e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.23e-15!15;UBERON:0000179!4.23e-15!15;UBERON:0000463!4.23e-15!15;UBERON:0002106!8.67e-08!3;UBERON:0004854!8.67e-08!3;UBERON:0009034!8.67e-08!3;UBERON:0002095!8.67e-08!3;UBERON:0004782!8.67e-08!3;UBERON:0003281!8.67e-08!3;UBERON:0009664!8.67e-08!3;UBERON:0002296!8.67e-08!3;UBERON:0005602!8.67e-08!3;UBERON:0001179!8.67e-08!3;UBERON:0006293!8.67e-08!3;UBERON:0004177!1.29e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.77e-14;3!UBERON:0004177;1.29e-08;5!UBERON:0005057;1.29e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.73e-14,3;UBERON:0004854,3.73e-14,3;UBERON:0009034,3.73e-14,3;UBERON:0002095,3.73e-14,3;UBERON:0004782,3.73e-14,3;UBERON:0003281,3.73e-14,3;UBERON:0009664,3.73e-14,3;UBERON:0002296,3.73e-14,3;UBERON:0005602,3.73e-14,3;UBERON:0001179,3.73e-14,3;UBERON:0006293,3.73e-14,3 | |||
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| 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| ||
|short_description=p4@PAX5 | |||
}} | }} |
Latest revision as of 10:14, 17 September 2015
Short description: | p4@PAX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PAX5_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -437bp_to_U62539_5end |
EntrezGene: | PAX5 |
HGNC: | 8619 |
UniProt: | Q93057 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.18e-97 | 24 |
pro-B cell | 2.18e-97 | 24 |
B cell | 4.90e-64 | 14 |
lymphocyte | 7.94e-53 | 53 |
common lymphoid progenitor | 7.94e-53 | 53 |
lymphoid lineage restricted progenitor cell | 8.34e-50 | 52 |
nongranular leukocyte | 1.42e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.24e-19 | 120 |
leukocyte | 3.82e-18 | 136 |
hematopoietic oligopotent progenitor cell | 4.53e-17 | 161 |
hematopoietic multipotent progenitor cell | 4.53e-17 | 161 |
hematopoietic stem cell | 4.35e-16 | 168 |
hematopoietic cell | 6.12e-15 | 177 |
precursor B cell | 1.19e-14 | 3 |
mature B cell | 1.93e-10 | 2 |
pre-B-II cell | 1.93e-10 | 2 |
transitional stage B cell | 1.93e-10 | 2 |
small pre-B-II cell | 1.93e-10 | 2 |
immature B cell | 1.93e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.73e-14 | 3 |
gastrointestinal system mesentery | 3.73e-14 | 3 |
stomach region | 3.73e-14 | 3 |
mesentery | 3.73e-14 | 3 |
gastrointestinal system serosa | 3.73e-14 | 3 |
mesentery of stomach | 3.73e-14 | 3 |
gut mesentery | 3.73e-14 | 3 |
dorsal mesentery | 3.73e-14 | 3 |
dorsal mesogastrium | 3.73e-14 | 3 |
peritoneal cavity | 3.73e-14 | 3 |
spleen primordium | 3.73e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.56e-21 | 10 |
hematologic cancer | 6.00e-12 | 51 |
immune system cancer | 6.00e-12 | 51 |