FFCP PHASE2:Hg19::chr8:22014298..22014326,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:203190 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:18711 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=203190 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18711 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8N145 | ||
|association_with_transcript=17bp_to_NM_139278,uc003xav.2,uc010ltu.2_5end | |association_with_transcript=17bp_to_NM_139278,uc003xav.2,uc010ltu.2_5end | ||
|cluster_id=chr8:22014298..22014326,- | |cluster_id=chr8:22014298..22014326,- |
Latest revision as of 10:18, 17 September 2015
Short description: | p1@LGI3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LGI3_5end |
Coexpression cluster: | C2076_Melanocyte_corpus_brain_occipital_temporal_postcentral_pons |
Association with transcript: | 17bp_to_NM_139278, uc003xav.2, uc010ltu.2_5end |
EntrezGene: | LGI3 |
HGNC: | 18711 |
UniProt: | Q8N145 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@LGI3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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melanocyte | 1.41e-12 | 10 |
melanoblast | 1.41e-12 | 10 |
pigment cell | 1.13e-08 | 14 |
light melanocyte | 1.23e-08 | 3 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
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neural tube | 8.25e-87 | 56 |
neural rod | 8.25e-87 | 56 |
future spinal cord | 8.25e-87 | 56 |
neural keel | 8.25e-87 | 56 |
regional part of nervous system | 2.96e-79 | 53 |
regional part of brain | 2.96e-79 | 53 |
brain | 1.34e-68 | 68 |
future brain | 1.34e-68 | 68 |
central nervous system | 5.53e-68 | 81 |
adult organism | 1.88e-64 | 114 |
Showing 1 to 10 of 84 entries