FFCP PHASE1:Hg19::chr4:26322616..26322652,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3516 | |EntrezGene=3516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5724 | |HGNC=5724 | ||
|TSSclassifier=strong | |||
|UniProt=D6RIV8 | |UniProt=D6RIV8 | ||
|association_with_transcript=0bp_to_ENST00000511401,ENST00000513182,ENST00000515023_5end | |association_with_transcript=0bp_to_ENST00000511401,ENST00000513182,ENST00000515023_5end | ||
|cluster_id=chr4:26322616..26322652,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_1_at_RBPJ_5end | |description=CAGE_peak_1_at_RBPJ_5end | ||
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|ontology_enrichment_celltype=CL:0000766!5.39e-32!76;CL:0000557!5.65e-29!71;CL:0002009!1.57e-28!65;CL:0002194!2.96e-27!63;CL:0000576!2.96e-27!63;CL:0000040!2.96e-27!63;CL:0000559!2.96e-27!63;CL:0000763!1.31e-26!112;CL:0000049!1.31e-26!112;CL:0002057!3.05e-26!42;CL:0000839!4.70e-25!70;CL:0000860!2.54e-23!45;CL:0000738!2.14e-22!140;CL:0000037!2.32e-19!172;CL:0000566!2.32e-19!172;CL:0002032!2.77e-18!165;CL:0000837!2.77e-18!165;CL:0000988!6.70e-17!182;CL:0002087!4.20e-16!119;CL:0002031!7.95e-16!124;CL:0000134!4.12e-09!358;CL:0002320!5.94e-09!365;CL:0000219!8.66e-08!390 | |ontology_enrichment_celltype=CL:0000766!5.39e-32!76;CL:0000557!5.65e-29!71;CL:0002009!1.57e-28!65;CL:0002194!2.96e-27!63;CL:0000576!2.96e-27!63;CL:0000040!2.96e-27!63;CL:0000559!2.96e-27!63;CL:0000763!1.31e-26!112;CL:0000049!1.31e-26!112;CL:0002057!3.05e-26!42;CL:0000839!4.70e-25!70;CL:0000860!2.54e-23!45;CL:0000738!2.14e-22!140;CL:0000037!2.32e-19!172;CL:0000566!2.32e-19!172;CL:0002032!2.77e-18!165;CL:0000837!2.77e-18!165;CL:0000988!6.70e-17!182;CL:0002087!4.20e-16!119;CL:0002031!7.95e-16!124;CL:0000134!4.12e-09!358;CL:0002320!5.94e-09!365;CL:0000219!8.66e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.38e-20;33!CL:0002057;5.38e-20;33!CL:0000576;1.42e-18;48!CL:0000473;1.15e-17;39!CL:0000234;1.15e-17;39!CL:0000766;1.47e-14;69!CL:0000763;3.61e-08;100 | |ontology_enrichment_celltype_v019=CL:0000860;5.38e-20;33!CL:0002057;5.38e-20;33!CL:0000576;1.42e-18;48!CL:0000473;1.15e-17;39!CL:0000234;1.15e-17;39!CL:0000766;1.47e-14;69!CL:0000763;3.61e-08;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.11e-34,72;CL:0000557,1.34e-31,67;CL:0002009,2.50e-31,61;CL:0002194,5.03e-30,59;CL:0000576,5.03e-30,59;CL:0000040,5.03e-30,59;CL:0000559,5.03e-30,59;CL:0000763,2.78e-28,108;CL:0000049,2.78e-28,108;CL:0000839,2.05e-27,66;CL:0000473,3.43e-27,48;CL:0000234,3.43e-27,48;CL:0000860,3.05e-26,42;CL:0002057,3.05e-26,42;CL:0000738,1.26e-23,136;CL:0000037,2.64e-20,168;CL:0002032,3.22e-19,161;CL:0000837,3.22e-19,161;CL:0000988,2.65e-18,177;CL:0002087,3.44e-17,115;CL:0002031,7.27e-17,120;CL:0000134,8.41e-10,354;CL:0002320,1.25e-09,361;CL:0000219,2.12e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.41e-19;42!CL:0000049;1.77e-08;108 | |ontology_enrichment_development_v019=CL:0002057;4.41e-19;42!CL:0000049;1.77e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.64e-33!102;UBERON:0003061!3.64e-33!102;UBERON:0002193!1.62e-27!112;UBERON:0001474!8.58e-27!86;UBERON:0004765!9.89e-27!101;UBERON:0001434!9.89e-27!101;UBERON:0002371!1.87e-26!80;UBERON:0002405!3.94e-14!115;UBERON:0002204!1.71e-13!167;UBERON:0002384!5.17e-09!375;UBERON:0007023!7.02e-09!115;UBERON:0000178!9.18e-08!15;UBERON:0000179!9.18e-08!15;UBERON:0000463!9.18e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!3.64e-33!102;UBERON:0003061!3.64e-33!102;UBERON:0002193!1.62e-27!112;UBERON:0001474!8.58e-27!86;UBERON:0004765!9.89e-27!101;UBERON:0001434!9.89e-27!101;UBERON:0002371!1.87e-26!80;UBERON:0002405!3.94e-14!115;UBERON:0002204!1.71e-13!167;UBERON:0002384!5.17e-09!375;UBERON:0007023!7.02e-09!115;UBERON:0000178!9.18e-08!15;UBERON:0000179!9.18e-08!15;UBERON:0000463!9.18e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.07e-08;15!UBERON:0000179;9.07e-08;15!UBERON:0000463;9.07e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;9.07e-08;15!UBERON:0000179;9.07e-08;15!UBERON:0000463;9.07e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.57e-35,98;UBERON:0003061,2.57e-35,98;UBERON:0002193,3.09e-29,108;UBERON:0001474,6.91e-29,82;UBERON:0002371,1.18e-28,76;UBERON:0001434,3.61e-28,100;UBERON:0004765,2.51e-26,90;UBERON:0002405,1.21e-22,93;UBERON:0002204,1.65e-14,167;UBERON:0002384,1.09e-09,371;UBERON:0007023,8.95e-09,114;UBERON:0000178,9.18e-08,15;UBERON:0000179,9.18e-08,15;UBERON:0000463,9.18e-08,15 | |||
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| ||
|short_description=p1@RBPJ | |short_description=p1@RBPJ | ||
}} | }} |
Latest revision as of 11:16, 17 September 2015
Short description: | p1@RBPJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBPJ_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000511401, ENST00000513182, ENST00000515023_5end |
EntrezGene: | RBPJ |
HGNC: | 5724 |
UniProt: | D6RIV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.11e-34 | 72 |
granulocyte monocyte progenitor cell | 1.34e-31 | 67 |
macrophage dendritic cell progenitor | 2.50e-31 | 61 |
monopoietic cell | 5.03e-30 | 59 |
monocyte | 5.03e-30 | 59 |
monoblast | 5.03e-30 | 59 |
promonocyte | 5.03e-30 | 59 |
myeloid cell | 2.78e-28 | 108 |
common myeloid progenitor | 2.78e-28 | 108 |
myeloid lineage restricted progenitor cell | 2.05e-27 | 66 |
defensive cell | 3.43e-27 | 48 |
phagocyte | 3.43e-27 | 48 |
classical monocyte | 3.05e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.05e-26 | 42 |
leukocyte | 1.26e-23 | 136 |
hematopoietic stem cell | 2.64e-20 | 168 |
hematopoietic oligopotent progenitor cell | 3.22e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.22e-19 | 161 |
hematopoietic cell | 2.65e-18 | 177 |
nongranular leukocyte | 3.44e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 7.27e-17 | 120 |
mesenchymal cell | 8.41e-10 | 354 |
connective tissue cell | 1.25e-09 | 361 |
motile cell | 2.12e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.57e-35 | 98 |
blood island | 2.57e-35 | 98 |
hemolymphoid system | 3.09e-29 | 108 |
bone element | 6.91e-29 | 82 |
bone marrow | 1.18e-28 | 76 |
skeletal system | 3.61e-28 | 100 |
skeletal element | 2.51e-26 | 90 |
immune system | 1.21e-22 | 93 |
musculoskeletal system | 1.65e-14 | 167 |
connective tissue | 1.09e-09 | 371 |
adult organism | 8.95e-09 | 114 |
blood | 9.18e-08 | 15 |
haemolymphatic fluid | 9.18e-08 | 15 |
organism substance | 9.18e-08 | 15 |