FFCP PHASE1:Hg19::chr13:45914261..45914276,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:45914261..45914276,- to FFCP PHASE1:Hg19::chr13:45914261..45914276,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7178 | |EntrezGene=7178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12022 | |HGNC=12022 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=116bp_to_ENST00000533567_5end | |||
|cluster_id=chr13:45914261..45914276,- | |||
|description=CAGE_peak_6_at_TPT1_5end | |||
|id=chr13:45914261..45914276,- | |||
|ontology_enrichment_celltype=CL:0002057!5.48e-14!42;CL:0000860!1.03e-12!45;CL:0002087!5.10e-10!119;CL:0002031!4.29e-09!124;CL:0002194!2.28e-08!63;CL:0000576!2.28e-08!63;CL:0000040!2.28e-08!63;CL:0000559!2.28e-08!63;CL:0000738!2.46e-08!140;CL:0002009!5.98e-08!65;CL:0000839!1.54e-07!70;CL:0000557!1.93e-07!71;CL:0000766!3.49e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.60e-15;33!CL:0002057;3.60e-15;33!CL:0000473;2.97e-10;39!CL:0000234;2.97e-10;39!CL:0000576;1.64e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.95e-15,42;CL:0002057,2.95e-15,42;CL:0000473,1.48e-12,48;CL:0000234,1.48e-12,48;CL:0002194,1.48e-09,59;CL:0000576,1.48e-09,59;CL:0000040,1.48e-09,59;CL:0000559,1.48e-09,59;CL:0002009,6.92e-09,61;CL:0000839,1.22e-08,66;CL:0000557,2.40e-08,67;CL:0002087,2.48e-08,115;CL:0000766,3.59e-08,72;CL:0002031,1.99e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;6.99e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.87e-07,76 | |||
|phase1_expression=1.63510541343501,2.5692062866918,1.83240725324762,0,1.78784437770915,0.872338524100369,2.53299878168311,0.631719873426831,3.13422753839806,0,0,0.218441372130172,0.791300934685361,0.74259811776028,1.65698687863958,0,0,0,0,0,0,0,0,0.684372125364421,0.87879847716362,0.61130724598361,0.410502947249729,0.314843125254717,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0.369754010166788,0.154934401160603,0,0.880801318004542,0.553995408531877,0.601633342410425,2.17010870715852,2.68698569087909,0.32389366601898,3.09090681161024,4.36194716338694,4.1566353805769,0.970336244751265,1.85943229524548,2.05583944010913,2.47765096716083,2.3015391385772,3.84241059793651,1.89185783910868,2.41321976515633,1.93645405075148,4.06279459783025,2.44715041405386,2.72906150057846,1.79778787556068,6.42776173978895,1.28371610830437,3.83602275479425,1.9791078011203,4.3882004676759,1.70489900213078,3.19230162491442,4.53908179752912,1.86846674698672,2.76373531782418,3.12889751052121,3.25783267057675,0.605399502633369,1.84138817993782,4.74693581161327,0.845021145247767,1.91343869968539,1.67726916406701,0.44931452458598,1.35159203557356,0.48217676009124,0.570025487482497,0.99458338599545,0.182664153764634,3.51992488922645,1.09227722252426,0.889509253863555,2.56038133539904,0.800791974072025,1.14950487990897,0,0.954053754535364,1.70763890732835,1.17447437874188,0.764546456250458,2.64342657158052,1.12101712596307,0.263384084775077,1.180258620683,2.75107533924415,1.85041349099558,3.51091640320424,2.28145586643513,2.8406868344084,3.89653456815823,2.56244050835899,1.47302953737419,1.10766947291811,0.541607727530031,2.94610035369053,0.780356085359269,2.46656856905514,0.552700035571697,1.15921234294021,1.77943875794473,2.40786745280742,1.04535523804977,2.37949619664889,2.68254345521345,2.06176467289578,3.03623630423403,3.50421955756506,0,1.90090408889675,1.05402583354441,0.383959833463255,0,1.89421801635213,0.821127996921047,0.604820229674197,0.802320587350522,2.02754165435919,4.87613732627923,0,1.02290049474824,0.361439152384566,2.00535164254356,2.462390822334,0.795285947051099,1.45990461090791,0.567208902984407,0.665188192387692,0.527008714158756,0.327447688744282,0.728590576585084,1.11235332835329,0,0.174129737299267,0.664789802594326,0.476981248610684,0,0.371457501329565,0.198762407366705,0,0,0,1.67799774483962,0.275118041940067,0.417989933073621,0.516833518338658,0,0.33472061276467,0,2.28081631715554,1.22031028774085,0,0,0.535798369704479,0,0.563057402416611,0,0,0.732806975721629,0,0,0.436094052142534,2.98183171017191,1.8994576749687,0,0.860509862246441,1.06400514659507,1.68203280042692,0,1.2333377420858,0.311211035399766,0.67355336034844,0.163461903113459,0.605429710579726,2.88087962239999,0,1.24864030732128,0.570471821544449,1.64393548606981,0.23486899728753,0.323745888736263,0.280901613404497,0.204154171254893,0.982674538494144,0.723280468230358,2.37600571456411,1.48360157567134,0,0,0,0.375355559615893,0,0.438977620880838,2.45190236639216,1.65261864797256,1.13432183160021,0,0.85422955527427,0.423863802319124,0,0.206105058476878,0,1.11670113798954,0,0.487185025805993,0,0.0920498986422993,0,0,0.201504196455281,0,0.57978255948989,0.818238361772504,0.286804595389004,0.243947412259191,0,0,0.621966330092223,0.504641701751257,0,0,1.28648187638577,0,0.928735856063958,2.16563844500876,0.236613600079688,0.337169380156203,0,0.110293972732394,0,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,0,0.982827216677626,1.18157981336281,0,0.491953754172454,0.343135620597051,0.658501712451753,0,0.301586917234893,1.01847289674383,0.325808305310325,0,0,0.34779121492523,1.76113041353732,1.01056513432752,0.462985512576611,1.33177906564219,1.58040879591855,1.71697232418975,0.984868024349589,0.234004265139238,0.743155811443641,0.93733833986777,0.503946384596579,0.283550194484773,0.179117045405697,0,0.383382679165211,0,0.44024217006613,2.69526550203004,0.864719720501769,1.00993946741104,0.253991577168676,1.14596527667483,0,0,0.514137463516618,0,0.571652865261156,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0.845302752556,1.59562869950922,1.04007436911366,0.257207374262142,0,0,0.57191197463259,0,0,0,1.06617584622764,0.791951872933429,1.50719688529793,0,1.89948683245908,0,1.00451418286425,0,0,0,0,0.868687840005475,1.64381058040307,0.358121926479791,0.672510863961164,0.591092280605782,0.862510299438069,1.79680250791648,0,0,0.773288812777695,0.167516265334349,1.27587750330633,1.49801404789436,0,1.65766205374414,0.858840442033979,0,1.62759014219841,2.9115920614313,3.39015078714607,0.630809660135739,2.34282829985426,2.40756879782175,2.27407504055985,5.17365356462525,0,0.737476674166813,1.04260337361699,0,0.686286847621712,0.413536052245775,1.2942852049117,1.49418580924822,0,0,0.604780586659361,1.48864684691266,0,1.40330047216537,1.40953064181271,1.02341449813341,2.0911009748669,1.48418066444991,0.154209693802656,1.9531789784444,0.164254312027618,0,0.464841513839837,2.65890789101569,1.604051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| ||
|short_description=p6@TPT1 | |||
}} | }} |
Latest revision as of 12:00, 17 September 2015
Short description: | p6@TPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 116bp_to_ENST00000533567_5end |
EntrezGene: | TPT1 |
HGNC: | 12022 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.95e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.95e-15 | 42 |
defensive cell | 1.48e-12 | 48 |
phagocyte | 1.48e-12 | 48 |
monopoietic cell | 1.48e-09 | 59 |
monocyte | 1.48e-09 | 59 |
monoblast | 1.48e-09 | 59 |
promonocyte | 1.48e-09 | 59 |
macrophage dendritic cell progenitor | 6.92e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.22e-08 | 66 |
granulocyte monocyte progenitor cell | 2.40e-08 | 67 |
nongranular leukocyte | 2.48e-08 | 115 |
myeloid leukocyte | 3.59e-08 | 72 |
hematopoietic lineage restricted progenitor cell | 1.99e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.87e-07 | 76 |