FFCP PHASE1:Hg19::chr1:155270770..155270797,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5313 | |EntrezGene=5313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9020 | |HGNC=9020 | ||
|TSSclassifier=strong | |||
|UniProt=P30613 | |UniProt=P30613 | ||
|association_with_transcript=0bp_to_ENST00000392414,NM_181871,uc001fka.3,uc010pga.1_5end | |association_with_transcript=0bp_to_ENST00000392414,NM_181871,uc001fka.3,uc010pga.1_5end | ||
|cluster_id=chr1:155270770..155270797,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_3_at_PKLR_5end | |description=CAGE_peak_3_at_PKLR_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!4.28e-22!12;CL:0000417!4.28e-22!12;CL:0000668!4.28e-22!12;CL:0000414!4.28e-22!12;CL:0000412!4.28e-22!12;CL:0000182!4.28e-22!12 | |ontology_enrichment_celltype=CL:0000181!4.28e-22!12;CL:0000417!4.28e-22!12;CL:0000668!4.28e-22!12;CL:0000414!4.28e-22!12;CL:0000412!4.28e-22!12;CL:0000182!4.28e-22!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.81e-24;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.81e-24;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.17e-24,12;CL:0000223,7.21e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.02e-26;11!UBERON:0009497;2.29e-22;13!UBERON:0003104;3.19e-13;31!UBERON:0001041;1.12e-09;30 | |ontology_enrichment_development_v019=UBERON:0004161;2.02e-26;11!UBERON:0009497;2.29e-22;13!UBERON:0003104;3.19e-13;31!UBERON:0001041;1.12e-09;30 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.35e-29,19;UBERON:0006925,1.35e-29,19;UBERON:0008836,1.35e-29,19;UBERON:0008835,1.70e-25,22;UBERON:0003894,1.70e-25,22;UBERON:0009854,2.29e-24,23;UBERON:0007499,2.23e-22,25;UBERON:0009497,2.23e-22,25;UBERON:0000015,2.23e-22,25;UBERON:0002423,2.23e-22,25;UBERON:0006235,2.23e-22,25;UBERON:0004161,2.23e-22,25;UBERON:0009856,1.69e-21,26;UBERON:0002365,6.05e-18,31;UBERON:0002330,6.05e-18,31;UBERON:0002368,7.86e-16,35;UBERON:0003929,5.07e-13,54;UBERON:0005172,5.16e-13,54;UBERON:0005173,5.16e-13,54;UBERON:0000949,3.49e-12,45;UBERON:0002417,1.25e-11,60;UBERON:0000916,1.25e-11,60;UBERON:0000160,1.38e-10,17;UBERON:0004921,1.96e-10,118;UBERON:0002108,2.35e-10,4;UBERON:0002530,3.82e-09,59;UBERON:0005911,2.80e-08,82;UBERON:0001007,3.16e-08,145;UBERON:0001555,3.16e-08,145;UBERON:0007026,3.16e-08,145;UBERON:0005409,2.17e-07,25;UBERON:0004119,2.56e-07,160;UBERON:0000925,2.56e-07,160;UBERON:0006595,2.56e-07,160 | |||
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|short_description=p3@PKLR | |short_description=p3@PKLR | ||
}} | }} |
Latest revision as of 12:20, 17 September 2015
Short description: | p3@PKLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PKLR_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000392414, NM_181871, uc001fka.3, uc010pga.1_5end |
EntrezGene: | PKLR |
HGNC: | 9020 |
UniProt: | P30613 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.17e-24 | 12 |
endodermal cell | 7.21e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.35e-29 | 19 |
digestive gland | 1.35e-29 | 19 |
liver bud | 1.35e-29 | 19 |
hepatic diverticulum | 1.70e-25 | 22 |
liver primordium | 1.70e-25 | 22 |
digestive tract diverticulum | 2.29e-24 | 23 |
epithelial sac | 2.23e-22 | 25 |
epithelium of foregut-midgut junction | 2.23e-22 | 25 |
anatomical boundary | 2.23e-22 | 25 |
hepatobiliary system | 2.23e-22 | 25 |
foregut-midgut junction | 2.23e-22 | 25 |
septum transversum | 2.23e-22 | 25 |
sac | 1.69e-21 | 26 |
exocrine gland | 6.05e-18 | 31 |
exocrine system | 6.05e-18 | 31 |
endocrine gland | 7.86e-16 | 35 |
gut epithelium | 5.07e-13 | 54 |
abdomen element | 5.16e-13 | 54 |
abdominal segment element | 5.16e-13 | 54 |
endocrine system | 3.49e-12 | 45 |
abdominal segment of trunk | 1.25e-11 | 60 |
abdomen | 1.25e-11 | 60 |
intestine | 1.38e-10 | 17 |
subdivision of digestive tract | 1.96e-10 | 118 |
small intestine | 2.35e-10 | 4 |
gland | 3.82e-09 | 59 |
endo-epithelium | 2.80e-08 | 82 |
digestive system | 3.16e-08 | 145 |
digestive tract | 3.16e-08 | 145 |
primitive gut | 3.16e-08 | 145 |
gastrointestinal system | 2.17e-07 | 25 |
endoderm-derived structure | 2.56e-07 | 160 |
endoderm | 2.56e-07 | 160 |
presumptive endoderm | 2.56e-07 | 160 |