FFCP PHASE1:Hg19::chr15:40544787..40544798,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56924 | |EntrezGene=56924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16061 | |HGNC=16061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=35bp_to_ENST00000560684_5end | |||
|cluster_id=chr15:40544787..40544798,+ | |||
|description=CAGE_peak_23_at_PAK6_5end | |||
|id=chr15:40544787..40544798,+ | |||
|ontology_enrichment_celltype=CL:0000039!4.09e-10!7;CL:0000586!4.09e-10!7;CL:0002322!2.03e-08!5;CL:0000066!1.81e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:1001319;4.66e-66;1!CL:1000600;4.66e-66;1!CL:0002188;1.50e-14;5!CL:0000039;8.57e-11;7!CL:1000746;8.57e-11;7!CL:1000612;8.57e-11;7!CL:0000586;8.57e-11;7!CL:0002681;7.70e-07;12!CL:0002584;7.70e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,4.66e-66,1;CL:1000600,4.66e-66,1;CL:0002188,1.60e-14,5;CL:0000039,8.16e-11,7;CL:0000586,8.16e-11,7;CL:1000746,8.99e-11,7;CL:1000612,8.99e-11,7;CL:0002681,7.92e-07,12;CL:0002584,7.92e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.01e-16!106;DOID:0050687!7.98e-13!143;DOID:162!4.15e-07!235;DOID:14566!8.99e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002294!2.57e-09!7;UBERON:0001173!2.57e-09!7;UBERON:0004912!2.57e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;4.66e-66;1!UBERON:0001256;4.66e-66;1!UBERON:0001259;4.66e-66;1!UBERON:0001255;7.04e-34;2!UBERON:0001556;7.04e-34;2!UBERON:0000365;1.83e-14;5!UBERON:0005910;2.74e-12;6!UBERON:0000074;8.57e-11;7!UBERON:0001229;8.57e-11;7!UBERON:0000489;3.17e-10;29!UBERON:0006554;6.37e-10;30!UBERON:0001008;6.37e-10;30!UBERON:0003350;1.47e-09;8!UBERON:0001225;7.70e-07;12!UBERON:0008987;7.70e-07;12!UBERON:0000486;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,4.66e-66,1;UBERON:0001256,4.66e-66,1;UBERON:0001259,4.66e-66,1;UBERON:0001255,7.05e-34,2;UBERON:0001556,7.05e-34,2;UBERON:0000365,1.83e-14,5;UBERON:0005910,2.74e-12,6;UBERON:0010532,8.99e-11,7;UBERON:0000074,8.99e-11,7;UBERON:0001229,8.99e-11,7;UBERON:0001230,8.99e-11,7;UBERON:0003220,8.99e-11,7;UBERON:0005749,8.99e-11,7;UBERON:0004199,8.99e-11,7;UBERON:0004209,8.99e-11,7;UBERON:0004198,8.99e-11,7;UBERON:0003064,1.54e-10,28;UBERON:0000489,1.25e-09,31;UBERON:0005103,1.35e-09,8;UBERON:0000083,1.35e-09,8;UBERON:0009201,1.35e-09,8;UBERON:0006553,1.35e-09,8;UBERON:0003074,1.35e-09,8;UBERON:0003060,1.35e-09,8;UBERON:0003350,1.47e-09,8;UBERON:0000080,1.12e-08,9;UBERON:0002120,1.12e-08,9;UBERON:0004875,1.12e-08,9;UBERON:0005721,1.12e-08,9;UBERON:0005754,1.12e-08,9;UBERON:0007297,1.12e-08,9;UBERON:0004876,2.47e-07,11;UBERON:0001225,7.92e-07,12;UBERON:0008987,7.92e-07,12;UBERON:0003887,7.92e-07,12 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.348581828608555,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.246169610922139,0,0.449341755736634,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0.69169171316418,0,2.49888955420619,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0.782205530939212,0.0801588202515337,0,0,0.432271251462318,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0.261906694481422,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0.131545547125698,0,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0.588901401691458,0.243835849964539,0,0,0,0,0.233939463462106,0.198950775161368,0,0.5647304101948,0,0.301925687133347,0,0,0.470317296361523,0,0.471353094203252,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61193297845189,0.534434810531121,0.459474497674225,0,0.0757786982182394,0,0,0,0.213233981900981,0.476128862927481,0,0,0,0.190941474834495,0,0.217716747896961,0,0.0673520530145875,0,0,1.13964576055364,0,0,0,0,0,0,0,0,0 | ||
|short_description=p23@PAK6 | |||
}} | }} |
Latest revision as of 12:52, 17 September 2015
Short description: | p23@PAK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_PAK6_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000560684_5end |
EntrezGene: | PAK6 |
HGNC: | 16061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 4.66e-66 | 1 |
lower urinary tract cell | 4.66e-66 | 1 |
glomerular endothelial cell | 1.60e-14 | 5 |
germ line cell | 8.16e-11 | 7 |
germ cell | 8.16e-11 | 7 |
glomerular cell | 8.99e-11 | 7 |
kidney corpuscule cell | 8.99e-11 | 7 |
kidney cortical cell | 7.92e-07 | 12 |
renal cortical epithelial cell | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 4.66e-66 | 1 |
wall of urinary bladder | 4.66e-66 | 1 |
mucosa of urinary bladder | 4.66e-66 | 1 |
urinary bladder | 7.05e-34 | 2 |
lower urinary tract | 7.05e-34 | 2 |
urothelium | 1.83e-14 | 5 |
transitional epithelium | 2.74e-12 | 6 |
primitive nephron | 8.99e-11 | 7 |
renal glomerulus | 8.99e-11 | 7 |
renal corpuscle | 8.99e-11 | 7 |
glomerular capsule | 8.99e-11 | 7 |
metanephric mesenchyme | 8.99e-11 | 7 |
glomerular tuft | 8.99e-11 | 7 |
S-shaped body | 8.99e-11 | 7 |
renal vesicle | 8.99e-11 | 7 |
comma-shaped body | 8.99e-11 | 7 |
intermediate mesoderm | 1.54e-10 | 28 |
cavitated compound organ | 1.25e-09 | 31 |
mesonephric epithelium | 1.35e-09 | 8 |
mesonephric tubule | 1.35e-09 | 8 |
nephric duct | 1.35e-09 | 8 |
renal duct | 1.35e-09 | 8 |
mesonephric duct | 1.35e-09 | 8 |
pronephric duct | 1.35e-09 | 8 |
epithelium of mucosa | 1.47e-09 | 8 |
mesonephros | 1.12e-08 | 9 |
pronephros | 1.12e-08 | 9 |
nephrogenic cord | 1.12e-08 | 9 |
pronephric mesoderm | 1.12e-08 | 9 |
rostral part of nephrogenic cord | 1.12e-08 | 9 |
presumptive pronephric mesoderm | 1.12e-08 | 9 |
urogenital ridge | 2.47e-07 | 11 |
cortex of kidney | 7.92e-07 | 12 |
renal parenchyma | 7.92e-07 | 12 |
intraembryonic coelom | 7.92e-07 | 12 |