FFCP PHASE1:Hg19::chr11:2923490..2923497,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:2923490..2923497,+
|short_description=p6@SLC22A18
|description=CAGE_peak_6_at_SLC22A18_5end
|association_with_transcript=-14bp_to_NM_002555,uc001lwy.2,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5002 | |EntrezGene=5002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10964 | |HGNC=10964 | ||
|TSSclassifier=strong | |||
|UniProt=Q96BI1 | |UniProt=Q96BI1 | ||
|association_with_transcript=-14bp_to_NM_002555,uc001lwy.2,uc001lwz.2_5end | |||
|cluster_id=chr11:2923490..2923497,+ | |||
|description=CAGE_peak_6_at_SLC22A18_5end | |||
|id=chr11:2923490..2923497,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.35e-10!180;CL:0000057!1.80e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002494;2.45e-10;16!CL:0002577;8.18e-10;3!CL:0002591;2.11e-08;1!CL:0002032;5.58e-08;1!CL:0000557;5.58e-08;1!CL:0002566;5.58e-08;1!CL:0002581;5.58e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.80e-10,16;CL:0002577,5.01e-10,3;CL:0002591,2.19e-08,1;CL:0002581,3.58e-08,1;CL:0002566,5.40e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;5.58e-08;1!DOID:3149;5.58e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.21e-07,1;DOID:3149,1.21e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;5.58e-08;1!UBERON:0001987;1.43e-07;4!UBERON:0000948;1.86e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,1.34e-09,24;UBERON:0005498,1.34e-09,24;UBERON:0004140,1.34e-09,24;UBERON:0009881,1.34e-09,24;UBERON:0004141,1.34e-09,24;UBERON:0003084,1.34e-09,24;UBERON:0007005,1.34e-09,24;UBERON:0004139,1.34e-09,24;UBERON:0004291,1.34e-09,24;UBERON:0007100,1.80e-08,27;UBERON:0004872,7.19e-08,83;UBERON:0007195,7.59e-08,1;UBERON:0001987,9.97e-08,4;UBERON:0004340,9.97e-08,4 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0.893922188854576,0,0,0,1.30592814099919,0,0,0.218441372130172,0,0.123766352960047,0.662794751455832,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0.0821005894499457,0.236132343941038,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,0.447830948479849,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0.768482119587302,0,0,0.645484683583826,0,0.188242339542605,0,0.449446968890169,0,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0.425208599930087,0.209658645508376,0.336985893439485,0.450530678524519,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.255973222308837,0,0.710331756132051,0,0,0,0.144824403882799,2.43806866313962,0,0.895037932904712,0,0,1.01392563272577,0,0,0.189069634328136,0,0.351339142772504,0.523916301990851,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,1.19168262731897,0.573673241497627,0.709336764396714,1.12135520028461,1.06748995729705,0.98667019366864,0,0.134710672069688,0.163461903113459,0.454072282934794,0,0.468642863667593,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.723280468230358,0,0.494533858557114,0,0.718618141816238,0,0,0,0.877955241761676,0.30648779579902,0.600952235626387,0,0.538168907066586,0.213557388818567,0.211931901159562,0,0.206105058476878,0.257640540045629,0.744467425326359,0.168776332241266,0.584622030967192,0.504867548488229,0.276149695926898,0.161646056818812,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0,0.243947412259191,0.132529768321485,0.464775771478074,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0.337169380156203,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0.4115740113314,2.94017422771084,1.26755034821831,0,0,0,0.122988438543114,0,0,0,0,0.185176890317059,0.325808305310325,0,0,0.927443239800615,0.234817388471643,0,0,0,0.790204397959275,0,0.984868024349589,0.468008530278475,0.594524649154913,0,0,0,0,0,0.766765358330422,0,0.088048434013226,0.621984346622316,0,0.12624243342638,1.20645999155121,1.14596527667483,0,0,0.411309970813294,0.600686115687835,0.285826432630578,0.112131084345361,0,0.07333828582095,0.129271715757778,3.57656445851882,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.499864955910285,0,0.502257091432126,0,0.479249710983165,0,0,0.289562613335158,0,0,0.112085143993527,0,0.431255149719035,0,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0.858840442033979,0,0,0.207970861530807,0.356857977594324,0.946214490203608,0.585707074963566,0.601892199455438,0,3.10419213877515,0,0,0.0868836144680828,1.56640925970192,0.686286847621712,0,0,0.213455115606889,0,1.66435439510497,1.20956117331872,0,0.153461973288062,0,0.256278298511402,0,0.482561763430822,1.48418066444991,0.154209693802656,0.710246901252508,0.0821271560138091,0.519254429183621,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.229628896329213,0.364182336013434,1.04899531967539,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0,0.831076008928724,0,0,0,0,0.328014645699706,0.650756789328606,0.412164046590889,0.183138929636687,0.247528499761764,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0,0,0,0,0,0.30347334256665,0.929691098594572,1.88887408098384,0,0,0.532306030317022,0,0,0.143124886741991,0,0.632758849437452,0.38126038784765,0,0,0.636406495851874,0,0,0,0,0.202182481573316,1.58510321173008,0.842516912477962,0.975267478179181,0.243713489631284,2.11300293513511,0.136499911407986,0,2.26016233240486,0,0,0,1.15755106853338,0,0.608731130888112,0,0.281695602532241,0,0.687743287091848,0.35667105148125,0.354761064070598,0.633322905892992,0.987884678879706,0,1.04980416073495,0,0,0,0.282431402330337,0,0,0.443430153536676,0.459446800413919,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0.427296284509893,1.92495971052672,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0.667396566847634,0.19538809540204,0,0,0,0,0,0.18714054040822,0.146508179271894,0.606802608747567,0.111443384277478,0.568272293612826,0.23874448473769,0.296964680832639,0,0,0,0.333926115068718,0,0.844501632511974,0,0.276283915531148,0,0.20453736500431,0,0.311039587661807,0,0,0,0.197286811273867,0,1.11136990144637,0,0.185536196323703,0,0,0.174919999992391,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0.219385397153973,0.32681539055697,0.278847488557207,0.230850775511391,0.227884111694002,0,0.0897576444097721,0.108647371922008,0,0.274792780205587,0,0,0,0.332423363800313,0.225595660617181,0.19606253431774,0,0,0,0.210998064528027,0.489698424477443,0.141353071433941,0.432777279484182,0,0.088457564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| ||
|short_description=p6@SLC22A18 | |||
}} | }} |
Latest revision as of 13:12, 17 September 2015
Short description: | p6@SLC22A18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC22A18_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_NM_002555, uc001lwy.2, uc001lwz.2_5end |
EntrezGene: | SLC22A18 |
HGNC: | 10964 |
UniProt: | Q96BI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.80e-10 | 16 |
placental epithelial cell | 5.01e-10 | 3 |
smooth muscle cell of the pulmonary artery | 2.19e-08 | 1 |
perirenal preadipocyte | 3.58e-08 | 1 |
dark melanocyte | 5.40e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
heart | 1.34e-09 | 24 |
primitive heart tube | 1.34e-09 | 24 |
primary heart field | 1.34e-09 | 24 |
anterior lateral plate mesoderm | 1.34e-09 | 24 |
heart tube | 1.34e-09 | 24 |
heart primordium | 1.34e-09 | 24 |
cardiac mesoderm | 1.34e-09 | 24 |
cardiogenic plate | 1.34e-09 | 24 |
heart rudiment | 1.34e-09 | 24 |
primary circulatory organ | 1.80e-08 | 27 |
splanchnic layer of lateral plate mesoderm | 7.19e-08 | 83 |
stroma of bone marrow | 7.59e-08 | 1 |
placenta | 9.97e-08 | 4 |
allantois | 9.97e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.21e-07 | 1 |
keratoacanthoma | 1.21e-07 | 1 |