FFCP PHASE1:Hg19::chr1:32135689..32135701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1307 | |EntrezGene=1307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2193 | |HGNC=2193 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=305bp_to_uc001bti.1_5end | |association_with_transcript=305bp_to_uc001bti.1_5end | ||
|cluster_id=chr1:32135689..32135701,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_27_at_COL16A1_5end | |description=CAGE_peak_27_at_COL16A1_5end | ||
|id=chr1:32135689..32135701,- | |id=chr1:32135689..32135701,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002575;9.86e-18;2!CL:0000632;2.74e-12;3!CL:0000669;1.50e-09;4!CL:0000540;8.72e-07;6!CL:0000404;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.27e-17,2;CL:0000632,2.59e-12,3;CL:0000669,1.70e-09,4;CL:0000540,8.02e-07,6;CL:0000031,8.02e-07,6;CL:0000404,8.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.78e-08;5!CL:0000031;8.72e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p27@COL16A1 | |short_description=p27@COL16A1 | ||
}} | }} |
Latest revision as of 13:40, 17 September 2015
Short description: | p27@COL16A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_COL16A1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 305bp_to_uc001bti.1_5end |
EntrezGene: | COL16A1 |
HGNC: | 2193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.27e-17 | 2 |
hepatic stellate cell | 2.59e-12 | 3 |
pericyte cell | 1.70e-09 | 4 |
neuron | 8.02e-07 | 6 |
neuroblast | 8.02e-07 | 6 |
electrically signaling cell | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.41e-67 | 2 |
regional part of epithalamus | 7.41e-67 | 2 |
secretory circumventricular organ | 7.41e-67 | 2 |
circumventricular organ | 7.41e-67 | 2 |
epithalamus | 7.41e-67 | 2 |
gland of diencephalon | 4.28e-34 | 4 |
neuroendocrine gland | 4.28e-34 | 4 |
regional part of diencephalon | 4.28e-34 | 4 |
diencephalon | 5.35e-20 | 7 |
future diencephalon | 5.35e-20 | 7 |
endocrine gland | 1.09e-15 | 35 |
endocrine system | 2.44e-12 | 45 |
gland | 1.52e-09 | 59 |
thyroid gland | 7.01e-08 | 5 |
pharyngeal pouch | 7.01e-08 | 5 |
thyroid diverticulum | 7.01e-08 | 5 |
pharyngeal pouch 2 | 7.01e-08 | 5 |
thyroid primordium | 7.01e-08 | 5 |