FFCP PHASE1:Hg19::chr5:2752216..2752257,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153571 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24226 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000457752_5end | |||
|cluster_id=chr5:2752216..2752257,+ | |||
|coexpression_cluster_id=C2821 | |||
|description=CAGE_peak_2_at_C5orf38_5end | |||
|id=chr5:2752216..2752257,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.09e-12!43;CL:0002251!1.73e-11!21;CL:0000066!1.75e-10!254;CL:0002620!1.84e-08!23;CL:0000076!9.41e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002251;1.16e-13;20!CL:0002076;1.26e-11;42!CL:0000349;2.74e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.57e-14,42;CL:0002251,9.56e-14,20;CL:0000066,1.49e-12,253;CL:0000223,1.28e-08,58;CL:0000076,4.38e-08,63;CL:0000349,2.65e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!9.34e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.57e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.21e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.29e-20!95;UBERON:0002199!2.09e-12!45;UBERON:0002416!2.09e-12!45;UBERON:0000915!1.57e-10!52;UBERON:0002097!6.39e-10!40;UBERON:0001004!1.62e-08!72;UBERON:0005178!1.89e-08!34;UBERON:0002224!1.89e-08!34;UBERON:0005181!5.84e-08!35;UBERON:0004923!9.09e-08!57;UBERON:0000475!9.69e-08!365;UBERON:0005157!1.23e-07!51;UBERON:0005631!1.64e-07!14;UBERON:0000158!1.64e-07!14;UBERON:0005153!9.96e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.39e-08;6!UBERON:0003293;1.39e-08;6!UBERON:0003294;1.39e-08;6!UBERON:0010047;1.39e-08;6!UBERON:0003408;1.39e-08;6!UBERON:0000167;1.39e-08;6!UBERON:0000161;1.73e-08;19!UBERON:0000166;1.73e-08;19!UBERON:0003102;3.41e-08;50!UBERON:0000165;5.40e-08;28!UBERON:0001041;1.25e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.81e-18,99;UBERON:0002199,3.26e-09,46;UBERON:0002416,3.26e-09,46;UBERON:0001004,6.47e-09,74;UBERON:0000165,9.79e-09,29;UBERON:0000930,9.79e-09,29;UBERON:0001044,1.47e-08,6;UBERON:0003293,1.47e-08,6;UBERON:0003294,1.47e-08,6;UBERON:0010047,1.47e-08,6;UBERON:0000167,1.47e-08,6;UBERON:0000915,2.66e-08,52;UBERON:0000166,3.76e-08,22;UBERON:0005631,5.92e-08,14;UBERON:0000158,5.92e-08,14;UBERON:0000033,9.52e-08,56;UBERON:0005157,1.37e-07,47;UBERON:0004119,2.48e-07,160;UBERON:0000925,2.48e-07,160;UBERON:0006595,2.48e-07,160;UBERON:0001444,2.68e-07,49;UBERON:0002097,3.92e-07,41;UBERON:0004923,5.68e-07,66;UBERON:0003124,7.32e-07,7;UBERON:0000153,7.49e-07,62;UBERON:0007811,7.49e-07,62 | |||
|phase1_expression=1.2717486548939,2.5692062866918,0,0,0,0,5.06599756336621,3.15859936713415,4.70134130759709,0.491467873003018,6.97801167972428,0.655324116390517,2.90143676051299,0,0.331397375727916,0.672325146451775,0,0,0,0.861847406537515,2.44800829493104,6.26909442956176,0,0,0,0,0,0,0,0,0.464448369948228,0.919421224478927,2.71085326900425,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,2.50668955317945,1.01392563272577,0,1.45990461090791,0,0,0,0.72038491523742,7.28590576585084,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,5.66922267785295,0,0.506522046658319,0.264818361626438,0,0,0,0,2.71334303258876,0,0.269421344139376,0,0,0,4.45210720484214,3.43376084513353,1.71141546463335,3.28787097213962,1.17434498643765,1.13311061057692,0.702254033511242,0,0,0.103325781175765,0,0,0,0,0,0,0,1.31693286264251,1.83892677479412,3.00476117813194,0,0.358779271377724,3.41691822109708,2.7551147150743,1.80054657650641,1.75189299705346,1.03056216018252,2.41951913231067,0.506328996723799,2.04617710838517,0.504867548488229,3.86609574297657,6.7891343863901,0.355009592516614,1.20902517873168,0.847802961552438,2.12586938479627,1.90922284413584,1.72082757233402,0,1.32529768321485,0.580969714347592,0.207322110030741,0.252320850875628,1.45990943630332,1.56449532329816,0.643240938192885,0,4.64367928031979,10.1063127433742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33678033231916,0,1.97550513735526,0,1.10581869652794,1.11106134190236,5.86454949558584,4.15973914111831,0,0,0,0.288732895522148,0.462985512576611,0,5.53143078571493,17.1697232418975,0,0,0,6.56136837907439,1.6798212819886,0.992425680696705,2.7763142037883,2.3250715081117,2.68367875415648,0,0,0,0,0.37872730027914,0.126995788584338,0,0,0,0,0,0,0,0,0,0,32.1890801266694,4.22651376278,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,1.19812427745791,5.7430967917057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.831883446123229,0,0,0,2.40756879782175,4.5481500811197,0,0,0.553107505625109,1.12948698808508,0,0.343143423810856,0,0,0,8.48757200049526,16.6435439510497,6.65258645325297,1.24053903909388,0.153461973288062,1.96462066103151,0,1.02341449813341,0,0,0.771048469013278,2.48586415438378,0.821271560138091,0,1.85936605535935,3.02148623979056,1.00253235151642,2.20994373446151,0.114814448164607,0,0.393373244878272,1.80479845162965,0.15403067420883,2.35304930753057,1.46139224653261,0.316654886678627,0,0,0,0,0,0,1.01950509218015,0,0.447749509444357,0,0,0,0,0,0.618246069886334,0.183138929636687,0.247528499761764,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,3.14041339185858,4.80475168412765,1.02090169995667,5.0578890427775,0.929691098594572,0.62962469366128,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0.767693373934002,0.855877976067841,0,0,0,0,0,1.2130948894399,1.58510321173008,0,0,1.70599442741899,3.16950440270266,0,0,0,0,0,0.438450885253763,1.15755106853338,0.655894752046633,0,0,0,0,0,0,0,1.89996871767898,1.97576935775941,1.13841952129715,3.49934720244983,2.4055528181378,0.670302275535787,2.17781969722645,1.31801321087491,1.72202149068492,1.68471475667626,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,3.92064345569651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,7.1623345421307,11.2846578716403,6.14321404198464,0,0.140669416410513,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,3.33410970433911,0,0,0,17.9695155148811,1.31189999994294,0,2.84483620713749,0,2.83665218121524,0,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0.219385397153973,0,8.6442721452734,0.0769502585037971,0,13.3727064545075,13.8226772391049,19.8824690617275,17.8640649449875,2.83952539545773,9.06159119231679,0,0,0,0,0,0,0,0,0,0,3.67517985728246,0.216388639742091,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,2.05784034570193,0.435296032902013,1.22308667769421,0,0,0,0,1.26085721434945,0,1.35588444468319,3.15196426687527,0,0,0,0,0,2.79733453414982,8.78951544640046,0,0,0,1.98804056904692,3.06402245001834,0,0,3.36594118199862,0,0.600420288709789,0,0,0,0,0,0,0,7.38812301846267,0.429226048136571,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0.77380195455795,0,15.094560941967,0.709251365692784,1.73100140845494,0,26.7138135605939,25.1408908488473,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0.171086837884329,0,1.9221734262185,1.41483874589699,1.24271716604159,0,0,0,3.83004754662109,5.44017803369474,1.2534494701135,4.90152922821539,1.63936315354902,3.29813602125492,0,0,0,0,0.110929051536852,0.558867626472451,0,2.24964734331792,0,0,0,1.87333962322753,0.28984205722165,1.94031243752936,3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| |||
|short_description=p2@C5orf38 | |||
}} |
Latest revision as of 14:07, 17 September 2015
Short description: | p2@C5orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C5orf38_5end |
Coexpression cluster: | C2821_oral_large_pancreatic_Mesenchymal_keratoacanthoma_choriocarcinoma_breast |
Association with transcript: | 0bp_to_ENST00000457752_5end |
EntrezGene: | C5orf38 |
HGNC: | 24226 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.57e-14 | 42 |
epithelial cell of alimentary canal | 9.56e-14 | 20 |
epithelial cell | 1.49e-12 | 253 |
endodermal cell | 1.28e-08 | 58 |
squamous epithelial cell | 4.38e-08 | 63 |
extraembryonic cell | 2.65e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.81e-18 | 99 |
integument | 3.26e-09 | 46 |
integumental system | 3.26e-09 | 46 |
respiratory system | 6.47e-09 | 74 |
mouth | 9.79e-09 | 29 |
stomodeum | 9.79e-09 | 29 |
saliva-secreting gland | 1.47e-08 | 6 |
gland of oral region | 1.47e-08 | 6 |
gland of foregut | 1.47e-08 | 6 |
oral gland | 1.47e-08 | 6 |
oral cavity | 1.47e-08 | 6 |
thoracic segment of trunk | 2.66e-08 | 52 |
oral opening | 3.76e-08 | 22 |
extraembryonic membrane | 5.92e-08 | 14 |
membranous layer | 5.92e-08 | 14 |
head | 9.52e-08 | 56 |
epithelial fold | 1.37e-07 | 47 |
endoderm-derived structure | 2.48e-07 | 160 |
endoderm | 2.48e-07 | 160 |
presumptive endoderm | 2.48e-07 | 160 |
subdivision of head | 2.68e-07 | 49 |
skin of body | 3.92e-07 | 41 |
organ component layer | 5.68e-07 | 66 |
chorion | 7.32e-07 | 7 |
anterior region of body | 7.49e-07 | 62 |
craniocervical region | 7.49e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.21e-07 | 14 |