FFCP PHASE1:Hg19::chr20:62369623..62369635,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56731 | |EntrezGene=56731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15930 | |HGNC=15930 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000467211_5end | |association_with_transcript=0bp_to_ENST00000467211_5end | ||
|cluster_id=chr20:62369623..62369635,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_18_at_SLC2A4RG_5end | |description=CAGE_peak_18_at_SLC2A4RG_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!7.10e-13!12;CL:0000417!7.10e-13!12;CL:0000668!7.10e-13!12;CL:0000414!7.10e-13!12;CL:0000412!7.10e-13!12;CL:0000182!7.10e-13!12 | |ontology_enrichment_celltype=CL:0000181!7.10e-13!12;CL:0000417!7.10e-13!12;CL:0000668!7.10e-13!12;CL:0000414!7.10e-13!12;CL:0000412!7.10e-13!12;CL:0000182!7.10e-13!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.45e-39;12!CL:0000136;1.08e-09;13 | |ontology_enrichment_celltype_v019=CL:0000182;2.45e-39;12!CL:0000136;1.08e-09;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.37e-39,12;CL:0000136,1.78e-08,15;CL:0000223,6.10e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.43e-30;11!UBERON:0009497;1.08e-25;13!UBERON:0003104;3.14e-15;31!UBERON:0001041;3.78e-11;30 | |ontology_enrichment_development_v019=UBERON:0004161;2.43e-30;11!UBERON:0009497;1.08e-25;13!UBERON:0003104;3.14e-15;31!UBERON:0001041;3.78e-11;30 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.98e-17!19;UBERON:0006925!1.98e-17!19;UBERON:0008836!1.98e-17!19;UBERON:0009497!9.55e-16!25;UBERON:0000015!9.55e-16!25;UBERON:0002423!9.55e-16!25;UBERON:0006235!9.55e-16!25;UBERON:0004161!9.55e-16!25;UBERON:0005057!6.20e-15!26;UBERON:0008835!8.16e-15!22;UBERON:0003894!8.16e-15!22;UBERON:0009854!4.28e-14!23;UBERON:0007499!7.92e-13!25;UBERON:0002368!1.10e-12!35;UBERON:0003929!2.67e-12!54;UBERON:0009856!2.87e-12!26;UBERON:0000949!3.84e-11!45;UBERON:0005172!1.96e-10!55;UBERON:0005173!1.96e-10!55;UBERON:0002365!5.18e-10!31;UBERON:0002330!5.18e-10!31;UBERON:0002417!3.94e-09!61;UBERON:0000916!3.94e-09!61;UBERON:0002530!6.48e-08!59;UBERON:0005911!4.56e-07!82 | |ontology_enrichment_uberon=UBERON:0002107!1.98e-17!19;UBERON:0006925!1.98e-17!19;UBERON:0008836!1.98e-17!19;UBERON:0009497!9.55e-16!25;UBERON:0000015!9.55e-16!25;UBERON:0002423!9.55e-16!25;UBERON:0006235!9.55e-16!25;UBERON:0004161!9.55e-16!25;UBERON:0005057!6.20e-15!26;UBERON:0008835!8.16e-15!22;UBERON:0003894!8.16e-15!22;UBERON:0009854!4.28e-14!23;UBERON:0007499!7.92e-13!25;UBERON:0002368!1.10e-12!35;UBERON:0003929!2.67e-12!54;UBERON:0009856!2.87e-12!26;UBERON:0000949!3.84e-11!45;UBERON:0005172!1.96e-10!55;UBERON:0005173!1.96e-10!55;UBERON:0002365!5.18e-10!31;UBERON:0002330!5.18e-10!31;UBERON:0002417!3.94e-09!61;UBERON:0000916!3.94e-09!61;UBERON:0002530!6.48e-08!59;UBERON:0005911!4.56e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.23e-44;19!UBERON:0006925;6.23e-44;19!UBERON:0002423;2.95e-33;25!UBERON:0002365;1.08e-25;31!UBERON:0002330;1.08e-25;31!UBERON:0002368;1.17e-22;33!UBERON:0000949;1.38e-16;43!UBERON:0005172;1.99e-12;52!UBERON:0005173;1.99e-12;52!UBERON:0002417;5.54e-11;58!UBERON:0000916;5.54e-11;58!UBERON:0002530;1.12e-08;57 | |ontology_enrichment_uberon_v019=UBERON:0002107;6.23e-44;19!UBERON:0006925;6.23e-44;19!UBERON:0002423;2.95e-33;25!UBERON:0002365;1.08e-25;31!UBERON:0002330;1.08e-25;31!UBERON:0002368;1.17e-22;33!UBERON:0000949;1.38e-16;43!UBERON:0005172;1.99e-12;52!UBERON:0005173;1.99e-12;52!UBERON:0002417;5.54e-11;58!UBERON:0000916;5.54e-11;58!UBERON:0002530;1.12e-08;57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.73e-44,19;UBERON:0006925,5.73e-44,19;UBERON:0008836,5.73e-44,19;UBERON:0008835,6.71e-38,22;UBERON:0003894,6.71e-38,22;UBERON:0009854,3.15e-36,23;UBERON:0007499,2.77e-33,25;UBERON:0009497,2.77e-33,25;UBERON:0000015,2.77e-33,25;UBERON:0002423,2.77e-33,25;UBERON:0006235,2.77e-33,25;UBERON:0004161,2.77e-33,25;UBERON:0009856,5.56e-32,26;UBERON:0002365,1.00e-26,31;UBERON:0002330,1.00e-26,31;UBERON:0002368,1.34e-23,35;UBERON:0005172,5.76e-19,54;UBERON:0005173,5.76e-19,54;UBERON:0000949,3.31e-18,45;UBERON:0002417,5.57e-17,60;UBERON:0000916,5.57e-17,60;UBERON:0003929,4.71e-15,54;UBERON:0002530,1.02e-13,59;UBERON:0005177,1.06e-09,101;UBERON:0005911,1.19e-09,82;UBERON:0001041,4.74e-09,87;UBERON:0009569,1.20e-08,112 | |||
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| ||
|short_description=p18@SLC2A4RG | |short_description=p18@SLC2A4RG | ||
}} | }} |
Latest revision as of 14:08, 17 September 2015
Short description: | p18@SLC2A4RG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SLC2A4RG_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000467211_5end |
EntrezGene: | SLC2A4RG |
HGNC: | 15930 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.37e-39 | 12 |
fat cell | 1.78e-08 | 15 |
endodermal cell | 6.10e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 5.73e-44 | 19 |
digestive gland | 5.73e-44 | 19 |
liver bud | 5.73e-44 | 19 |
hepatic diverticulum | 6.71e-38 | 22 |
liver primordium | 6.71e-38 | 22 |
digestive tract diverticulum | 3.15e-36 | 23 |
epithelial sac | 2.77e-33 | 25 |
epithelium of foregut-midgut junction | 2.77e-33 | 25 |
anatomical boundary | 2.77e-33 | 25 |
hepatobiliary system | 2.77e-33 | 25 |
foregut-midgut junction | 2.77e-33 | 25 |
septum transversum | 2.77e-33 | 25 |
sac | 5.56e-32 | 26 |
exocrine gland | 1.00e-26 | 31 |
exocrine system | 1.00e-26 | 31 |
endocrine gland | 1.34e-23 | 35 |
abdomen element | 5.76e-19 | 54 |
abdominal segment element | 5.76e-19 | 54 |
endocrine system | 3.31e-18 | 45 |
abdominal segment of trunk | 5.57e-17 | 60 |
abdomen | 5.57e-17 | 60 |
gut epithelium | 4.71e-15 | 54 |
gland | 1.02e-13 | 59 |
trunk region element | 1.06e-09 | 101 |
endo-epithelium | 1.19e-09 | 82 |
foregut | 4.74e-09 | 87 |
subdivision of trunk | 1.20e-08 | 112 |