FFCP PHASE1:Hg19::chr13:48611665..48611708,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:48611665..48611708,+
|short_description=p3@NUDT15
|description=CAGE_peak_3_at_NUDT15_5end
|association_with_transcript=0bp_to_ENST00000258662,NM_018283,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55270 | |EntrezGene=55270 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23063 | |HGNC=23063 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NV35 | |UniProt=Q9NV35 | ||
|association_with_transcript=0bp_to_ENST00000258662,NM_018283,uc001vbv.2,uc001vbw.1_5end | |||
|cluster_id=chr13:48611665..48611708,+ | |||
|coexpression_cluster_id=C425 | |||
|description=CAGE_peak_3_at_NUDT15_5end | |||
|id=chr13:48611665..48611708,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.12e-19!254;CL:0002322!2.54e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.60e-30;5!CL:0002321;6.59e-10;15!CL:0000148;1.01e-09;10!CL:0000540;1.15e-09;6!CL:0000404;1.15e-09;6!CL:0000039;2.46e-08;7!CL:0000586;2.46e-08;7!CL:0000147;5.85e-07;14!CL:0000817;7.29e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.71e-30,5;CL:0000148,9.38e-10,10;CL:0000541,9.38e-10,10;CL:0000540,1.15e-09,6;CL:0000031,1.15e-09,6;CL:0000404,1.15e-09,6;CL:0000039,2.46e-08,7;CL:0000586,2.46e-08,7;CL:0000047,2.36e-07,8;CL:0000147,5.54e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.16e-10;10!UBERON:0005564;9.16e-10;10!CL:0000031;1.15e-09;6 | |||
|ontology_enrichment_disease=DOID:162!4.62e-24!235;DOID:305!5.51e-24!106;DOID:14566!7.74e-23!239;DOID:0050687!8.98e-22!143;DOID:299!5.06e-08!25;DOID:0050686!5.31e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.15e-09;22!DOID:2994;5.15e-09;22!DOID:2355;7.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.81e-10,106;DOID:3095,5.15e-09,22;DOID:2994,5.15e-09,22;DOID:162,6.92e-08,235;DOID:0050687,7.48e-08,143;DOID:14566,1.26e-07,239;DOID:2355,8.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.51e-10!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.41e-07;8!UBERON:0000997;7.29e-07;1!UBERON:0005056;7.29e-07;1!UBERON:0004176;7.29e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.42e-07,8;UBERON:0000997,9.73e-07,1;UBERON:0005056,9.73e-07,1 | |||
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| ||
|short_description=p3@NUDT15 | |||
}} | }} |
Latest revision as of 14:45, 17 September 2015
Short description: | p3@NUDT15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NUDT15_5end |
Coexpression cluster: | C425_iPS_HES3GFP_H9_teratocarcinoma_testicular_hepatocellular_Wilms |
Association with transcript: | 0bp_to_ENST00000258662, NM_018283, uc001vbv.2, uc001vbw.1_5end |
EntrezGene: | NUDT15 |
HGNC: | 23063 |
UniProt: | Q9NV35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.71e-30 | 5 |
melanocyte | 9.38e-10 | 10 |
melanoblast | 9.38e-10 | 10 |
neuron | 1.15e-09 | 6 |
neuroblast | 1.15e-09 | 6 |
electrically signaling cell | 1.15e-09 | 6 |
germ line cell | 2.46e-08 | 7 |
germ cell | 2.46e-08 | 7 |
neuronal stem cell | 2.36e-07 | 8 |
pigment cell | 5.54e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 2.42e-07 | 8 |
mammalian vulva | 9.73e-07 | 1 |
external female genitalia | 9.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.81e-10 | 106 |
germ cell and embryonal cancer | 5.15e-09 | 22 |
germ cell cancer | 5.15e-09 | 22 |
cancer | 6.92e-08 | 235 |
cell type cancer | 7.48e-08 | 143 |
disease of cellular proliferation | 1.26e-07 | 239 |
anemia | 8.18e-07 | 1 |