FFCP PHASE1:Hg19::chr9:6716430..6716455,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23081 | |EntrezGene=23081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=17071 | |HGNC=17071 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_uc003zkd.2,uc003zke.2_5end | |association_with_transcript=-39bp_to_uc003zkd.2,uc003zke.2_5end | ||
|cluster_id=chr9:6716430..6716455,+ | |||
|description=CAGE_peak_14_at_KDM4C_5end | |description=CAGE_peak_14_at_KDM4C_5end | ||
|id=chr9:6716430..6716455,+ | |id=chr9:6716430..6716455,+ | ||
|ontology_enrichment_celltype=CL:0000838!8.41e-08!52;CL:0000542!1.62e-07!53;CL:0000051!1.62e-07!53;CL:0000945!3.83e-07!24;CL:0000826!3.83e-07!24 | |ontology_enrichment_celltype=CL:0000838!8.41e-08!52;CL:0000542!1.62e-07!53;CL:0000051!1.62e-07!53;CL:0000945!3.83e-07!24;CL:0000826!3.83e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.15e-09;24!CL:0002535;3.96e-08;2!CL:0000182;2.12e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,1.89e-12,3;CL:0000785,5.37e-09,2;CL:0000955,5.37e-09,2;CL:0000818,5.37e-09,2;CL:0000954,5.37e-09,2;CL:0000816,5.37e-09,2;CL:0000945,5.47e-09,24;CL:0000826,5.47e-09,24;CL:0002535,5.02e-08,2;CL:0000182,1.77e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000954;5.35e-09;2 | |||
|ontology_enrichment_disease=DOID:305!1.62e-10!106;DOID:0050687!2.10e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4074;9.50e-09;2!DOID:4905;9.50e-09;2!DOID:3498;9.50e-09;2!DOID:4362;6.82e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,8.82e-09,2;DOID:4905,8.82e-09,2;DOID:3498,8.82e-09,2;DOID:0050686,2.13e-07,137;DOID:4362,6.28e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-12!115;UBERON:0004921!5.74e-12!129;UBERON:0004185!5.74e-12!129;UBERON:0000077!1.82e-09!130;UBERON:0001041!2.71e-09!98;UBERON:0001007!8.47e-09!155;UBERON:0001555!8.47e-09!155;UBERON:0007026!8.47e-09!155;UBERON:0004119!2.75e-08!169;UBERON:0000925!2.75e-08!169;UBERON:0006595!2.75e-08!169;UBERON:0009497!3.69e-08!25;UBERON:0000015!3.69e-08!25;UBERON:0002423!3.69e-08!25;UBERON:0006235!3.69e-08!25;UBERON:0004161!3.69e-08!25;UBERON:0009854!4.60e-08!23;UBERON:0001737!7.55e-08!9;UBERON:0008835!1.65e-07!22;UBERON:0003894!1.65e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000949;6.22e-09;43!UBERON:0002107;1.13e-08;19!UBERON:0006925;1.13e-08;19!UBERON:0000160;1.20e-08;17!UBERON:0002423;3.04e-08;25!UBERON:0006955;3.96e-08;2!UBERON:0004801;3.96e-08;2!UBERON:0002365;6.59e-08;31!UBERON:0002330;6.59e-08;31!UBERON:0002108;4.53e-07;4!UBERON:0002368;9.80e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,1.18e-09,22;UBERON:0003894,1.18e-09,22;UBERON:0000949,1.95e-09,45;UBERON:0009854,3.56e-09,23;UBERON:0002107,9.07e-09,19;UBERON:0006925,9.07e-09,19;UBERON:0008836,9.07e-09,19;UBERON:0000160,1.55e-08,17;UBERON:0007499,2.47e-08,25;UBERON:0009497,2.47e-08,25;UBERON:0000015,2.47e-08,25;UBERON:0002423,2.47e-08,25;UBERON:0006235,2.47e-08,25;UBERON:0004161,2.47e-08,25;UBERON:0002365,4.55e-08,31;UBERON:0002330,4.55e-08,31;UBERON:0006955,5.02e-08,2;UBERON:0004801,5.02e-08,2;UBERON:0009856,5.82e-08,26;UBERON:0005409,2.18e-07,25;UBERON:0002368,4.94e-07,35;UBERON:0002108,5.66e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50839093912912,3.28402357799783,3.93553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0.802622484269139,0,0.566546713487831,0,0,0.253019692019503,0,0.651083453856419,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.842923450390509,0.241011029883482,0.441175890929576,0.653638332277218,0.237270619111097,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,12.6755034821831,3.9313088667105,1.77236972004421,2.20731549707325,1.10689594688802,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,1.71697232418975,0.246217006087397,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0.507447609232169,0,0,0,0,0.648473311192717,0.540031437238115,0,0,0,0.980160863924127,0,2.74111504655245,2.98795742063339,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.835218521685727,0,0,0,1.4098700508785,3.92995134857262,0,0,0.111443384277478,0,0,0.593929361665277,0.307160702099232,0.994147647766298,0.281338832821026,0,2.63686198762815,0,0.19924798825107,0.276283915531148,2.01546198283421,0,0,0,0.269605053441981,0.358042349351218,0,0.295930216910801,0,0,0,0.0927680981618513,0,0.520855522170466,0.699679999969566,0,0,0,0.472775363535873,0.689486746482929,0,0.520874984799877,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0,0,0.278847488557207,0.0769502585037971,0,0,0.628303510868405,0.760531603454056,0,0.183195186803725,1.06606955203727,1.02193298195737,0,0.664846727600626,0,0,0,0,0,0,0,1.55488378577335,0,0.995261931078505,1.14994833854341,1.22206028986725,0,0,0,0.067401132980677,0,0,5.47364367646998,4.30462161650597,2.42780379534093,1.18375320854817,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,1.30588809870604,1.04836000945218,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0.195551382734803,0,0.640358984218058,0.19980960958213,0,0,1.88754497648161,0,0,0.471388069233591,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,1.41809728153003,0.988990300573997,1.28066733322951,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0.453248366080503,3.81035807563014,3.97520666736664,0.129282956361551,0.13223260174269,0,3.52407511158336,0,0.157204305099666,0,0,3.35939774226505,0.243585196761792,0,0,0,0,0,1.57054096250234,0,0,0,0,0.221858103073705,0,0,0,0.303298235083296,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0.438568099157414,0,0,0,0,0,0,0.414775308455192,1.16916185303633,0.132864840313363,0,0,0,0.633936370075881,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,2.36569737947272,0,0,0,0.0634158101939068,0,1.64477330057155,0,0,0,0,2.35398605553177,0.606965604236632,2.04895972216168,0.532214220975833,3.80272158934072,0.171488009437418,0.339848664884159,0.0657727735628491,0,0,0.313972371402056,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0.447421727191169,0,0.853425474875886,0,0,0,0,1.87151570769685,0,0,0,0,2.2644426535001,2.08370226891451,0.874238242015829,2.35158648180761,0,0.942706188406504,0,0,0,0,0,0.257831551894309,2.99823467774787,2.14264726326789,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0.126698501011437,0,0,0,0,4.47094319487613,11.7904217268719,0,0.103432995861895,0,0,0.0645889098360061,0.558672428662721,0,0.12729431655633,0,0,0,0.80822463617505,0.215166616178029,0,0.162806537221949,1.28072815053259,0,0.179650404213174,0,0,0,0,0.201273793591026,5.44966436915496 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| ||
|short_description=p14@KDM4C | |short_description=p14@KDM4C | ||
}} | }} |
Latest revision as of 15:11, 17 September 2015
Short description: | p14@KDM4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KDM4C_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_uc003zkd.2, uc003zke.2_5end |
EntrezGene: | KDM4C |
HGNC: | 17071 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 1.89e-12 | 3 |
mature B cell | 5.37e-09 | 2 |
pre-B-II cell | 5.37e-09 | 2 |
transitional stage B cell | 5.37e-09 | 2 |
small pre-B-II cell | 5.37e-09 | 2 |
immature B cell | 5.37e-09 | 2 |
lymphocyte of B lineage | 5.47e-09 | 24 |
pro-B cell | 5.47e-09 | 24 |
epithelial cell of cervix | 5.02e-08 | 2 |
hepatocyte | 1.77e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 1.18e-09 | 22 |
liver primordium | 1.18e-09 | 22 |
endocrine system | 1.95e-09 | 45 |
digestive tract diverticulum | 3.56e-09 | 23 |
liver | 9.07e-09 | 19 |
digestive gland | 9.07e-09 | 19 |
liver bud | 9.07e-09 | 19 |
intestine | 1.55e-08 | 17 |
epithelial sac | 2.47e-08 | 25 |
epithelium of foregut-midgut junction | 2.47e-08 | 25 |
anatomical boundary | 2.47e-08 | 25 |
hepatobiliary system | 2.47e-08 | 25 |
foregut-midgut junction | 2.47e-08 | 25 |
septum transversum | 2.47e-08 | 25 |
exocrine gland | 4.55e-08 | 31 |
exocrine system | 4.55e-08 | 31 |
uterine epithelium | 5.02e-08 | 2 |
cervix epithelium | 5.02e-08 | 2 |
sac | 5.82e-08 | 26 |
gastrointestinal system | 2.18e-07 | 25 |
endocrine gland | 4.94e-07 | 35 |
small intestine | 5.66e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 8.82e-09 | 2 |
pancreatic carcinoma | 8.82e-09 | 2 |
pancreatic ductal adenocarcinoma | 8.82e-09 | 2 |
organ system cancer | 2.13e-07 | 137 |
cervical cancer | 6.28e-07 | 5 |