FFCP PHASE1:Hg19::chr9:6716458..6716474,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23081 | |EntrezGene=23081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=17071 | |HGNC=17071 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_uc003zkd.2,uc003zke.2_5end | |association_with_transcript=-20bp_to_uc003zkd.2,uc003zke.2_5end | ||
|cluster_id=chr9:6716458..6716474,+ | |||
|description=CAGE_peak_15_at_KDM4C_5end | |description=CAGE_peak_15_at_KDM4C_5end | ||
|id=chr9:6716458..6716474,+ | |id=chr9:6716458..6716474,+ | ||
|ontology_enrichment_celltype=CL:0000838!3.26e-07!52;CL:0000542!5.69e-07!53;CL:0000051!5.69e-07!53;CL:0000945!8.16e-07!24;CL:0000826!8.16e-07!24 | |ontology_enrichment_celltype=CL:0000838!3.26e-07!52;CL:0000542!5.69e-07!53;CL:0000051!5.69e-07!53;CL:0000945!8.16e-07!24;CL:0000826!8.16e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.06e-11;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,5.75e-15,3;CL:0000838,2.97e-12,52;CL:0000542,5.68e-12,53;CL:0000051,5.68e-12,53;CL:0000945,2.35e-11,24;CL:0000826,2.35e-11,24;CL:0000785,4.89e-11,2;CL:0000955,4.89e-11,2;CL:0000818,4.89e-11,2;CL:0000954,4.89e-11,2;CL:0000816,4.89e-11,2 | |||
|ontology_enrichment_development_v019=CL:0000954;4.52e-11;2 | |||
|ontology_enrichment_disease=DOID:305!1.36e-12!106;DOID:0050687!1.15e-08!143;DOID:162!3.71e-08!235;DOID:14566!1.15e-07!239 | |ontology_enrichment_disease=DOID:305!1.36e-12!106;DOID:0050687!1.15e-08!143;DOID:162!3.71e-08!235;DOID:14566!1.15e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:4074;1.48e-10;2!DOID:4905;1.48e-10;2!DOID:3498;1.48e-10;2!DOID:299;3.26e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.29e-10,2;DOID:4905,1.29e-10,2;DOID:3498,1.29e-10,2;DOID:299,3.39e-08,25;DOID:0050686,7.61e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0004921!4.22e-11!129;UBERON:0004185!4.22e-11!129;UBERON:0001007!2.40e-09!155;UBERON:0001555!2.40e-09!155;UBERON:0007026!2.40e-09!155;UBERON:0001041!3.62e-08!98;UBERON:0004119!5.55e-08!169;UBERON:0000925!5.55e-08!169;UBERON:0006595!5.55e-08!169;UBERON:0000077!6.46e-07!130;UBERON:0005409!9.26e-07!35 | |ontology_enrichment_uberon=UBERON:0004921!4.22e-11!129;UBERON:0004185!4.22e-11!129;UBERON:0001007!2.40e-09!155;UBERON:0001555!2.40e-09!155;UBERON:0007026!2.40e-09!155;UBERON:0001041!3.62e-08!98;UBERON:0004119!5.55e-08!169;UBERON:0000925!5.55e-08!169;UBERON:0006595!5.55e-08!169;UBERON:0000077!6.46e-07!130;UBERON:0005409!9.26e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;6.03e-15;4!UBERON:0000160;1.19e-08;17!UBERON:0002114;4.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,4.05e-15,4;UBERON:0000160,1.11e-08,17;UBERON:0005409,8.40e-08,25;UBERON:0002114,3.28e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,2.13957536094264,1.88831355734875,1.8890587515283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0,0,0.334372990781356,0,0,1.94826728407911,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0.679856056185397,0.383220493601921,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.220587945464788,0.435758888184812,0.71181185733329,0.134831308160164,0,0,0,0,0,0,5.07020139287323,1.96565443335525,2.36315962672562,0.882926198829301,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,1.00988449083511,1.35169502361987,1.4348364545594,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0,0,4.22961015263549,1.49712432326576,0,0,0,0,0,0,0,0,0.281338832821026,0,1.15362711958732,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0.537063524026827,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.520855522170466,0.174919999992391,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0.278847488557207,0,0,0,0.269272933229316,0.434589487688032,0,0,0,1.02193298195737,0,0.831058409500782,0,0,0,0,0,0,0,1.27217764290547,0,0.995261931078505,1.32686346755009,0.611030144933625,0,0,0,0,0,0,4.37891494117598,2.34797542718508,1.45668227720456,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0,0,0.522355239482415,0,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0.391102765469606,0,0,0.19980960958213,0,0,1.20116498503375,0,0,0.942776138467182,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.576911008668165,0.674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51725360827398,0,0,0,0,2.81926008926669,0,0,0,0.496166021811951,2.37133958277533,0,0.638341257770182,0,0,0,0,0.785270481251171,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0.389720617678777,0,0,0,0,1.05656061679314,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,1.47856086217045,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.91064876540519,0,2.07421177600403,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0.447421727191169,0,0.487671699929078,0,0,0,0,0.467878926924211,0,0,0,0,1.35866559210006,1.85217979459067,1.09279780251979,6.1141248526998,0.245148321753905,1.64973582971138,0,0,0,0,0,0.193373663920732,1.39917618294901,0.71421575442263,0,0,0,0,0,0,0.0679914901909147,0,1.5870805215462,0,0,0,0,0,0,0.101988829741982,0,0,0.50141507858475,3.10692662694782,7.23503151421682,0,0,0.213233981900981,0.23806443146374,0.129177819672012,0.620747142958579,0,0,0.404234377916439,0,0,0.471464371102113,0.286888821570705,0,0.325613074443898,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,2.13957536094264,1.88831355734875,1.8890587515283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0,0,0.334372990781356,0,0,1.94826728407911,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0.679856056185397,0.383220493601921,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.220587945464788,0.435758888184812,0.71181185733329,0.134831308160164,0,0,0,0,0,0,5.07020139287323,1.96565443335525,2.36315962672562,0.882926198829301,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,1.00988449083511,1.35169502361987,1.4348364545594,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0,0,4.22961015263549,1.49712432326576,0,0,0,0,0,0,0,0,0.281338832821026,0,1.15362711958732,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0.537063524026827,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.520855522170466,0.174919999992391,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0.278847488557207,0,0,0,0.269272933229316,0.434589487688032,0,0,0,1.02193298195737,0,0.831058409500782,0,0,0,0,0,0,0,1.27217764290547,0,0.995261931078505,1.32686346755009,0.611030144933625,0,0,0,0,0,0,4.37891494117598,2.34797542718508,1.45668227720456,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0,0,0.522355239482415,0,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0.391102765469606,0,0,0.19980960958213,0,0,1.20116498503375,0,0,0.942776138467182,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.576911008668165,0.674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51725360827398,0,0,0,0,2.81926008926669,0,0,0,0.496166021811951,2.37133958277533,0,0.638341257770182,0,0,0,0,0.785270481251171,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0.389720617678777,0,0,0,0,1.05656061679314,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,1.47856086217045,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.91064876540519,0,2.07421177600403,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0.447421727191169,0,0.487671699929078,0,0,0,0,0.467878926924211,0,0,0,0,1.35866559210006,1.85217979459067,1.09279780251979,6.1141248526998,0.245148321753905,1.64973582971138,0,0,0,0,0,0.193373663920732,1.39917618294901,0.71421575442263,0,0,0,0,0,0,0.0679914901909147,0,1.5870805215462,0,0,0,0,0,0,0.101988829741982,0,0,0.50141507858475,3.10692662694782,7.23503151421682,0,0,0.213233981900981,0.23806443146374,0.129177819672012,0.620747142958579,0,0,0.404234377916439,0,0,0.471464371102113,0.286888821570705,0,0.325613074443898,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,1.28227396921293 | ||
|short_description=p15@KDM4C | |short_description=p15@KDM4C | ||
}} | }} |
Latest revision as of 15:11, 17 September 2015
Short description: | p15@KDM4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_KDM4C_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_uc003zkd.2, uc003zke.2_5end |
EntrezGene: | KDM4C |
HGNC: | 17071 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 5.75e-15 | 3 |
lymphoid lineage restricted progenitor cell | 2.97e-12 | 52 |
lymphocyte | 5.68e-12 | 53 |
common lymphoid progenitor | 5.68e-12 | 53 |
lymphocyte of B lineage | 2.35e-11 | 24 |
pro-B cell | 2.35e-11 | 24 |
mature B cell | 4.89e-11 | 2 |
pre-B-II cell | 4.89e-11 | 2 |
transitional stage B cell | 4.89e-11 | 2 |
small pre-B-II cell | 4.89e-11 | 2 |
immature B cell | 4.89e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 4.05e-15 | 4 |
intestine | 1.11e-08 | 17 |
gastrointestinal system | 8.40e-08 | 25 |
duodenum | 3.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.29e-10 | 2 |
pancreatic carcinoma | 1.29e-10 | 2 |
pancreatic ductal adenocarcinoma | 1.29e-10 | 2 |
adenocarcinoma | 3.39e-08 | 25 |
organ system cancer | 7.61e-08 | 137 |