FFCP PHASE1:Hg19::chr17:74533666..74533675,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114757 | |EntrezGene=114757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16505 | |HGNC=16505 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWM9 | |UniProt=Q8WWM9 | ||
|association_with_transcript=106bp_to_ENST00000293230,NM_134268,uc002jru.1_5end | |association_with_transcript=106bp_to_ENST00000293230,NM_134268,uc002jru.1_5end | ||
|cluster_id=chr17:74533666..74533675,- | |||
|description=CAGE_peak_13_at_CYGB_5end | |description=CAGE_peak_13_at_CYGB_5end | ||
|id=chr17:74533666..74533675,- | |id=chr17:74533666..74533675,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.29e-22;3!CL:0000746;2.64e-10;3!CL:0000737;6.14e-08;4!CL:0000148;4.02e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.39e-22,3;CL:0000746,1.96e-10,3;CL:0000513,1.96e-10,3;CL:0000737,4.90e-08,4;CL:0000148,4.11e-07,10;CL:0000541,4.11e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000513;2.64e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.00e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.05e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.78e-18!115;UBERON:0000475!9.82e-15!365;UBERON:0001049!3.12e-14!57;UBERON:0005068!3.12e-14!57;UBERON:0006241!3.12e-14!57;UBERON:0007135!3.12e-14!57;UBERON:0002616!3.19e-14!59;UBERON:0003075!5.57e-13!86;UBERON:0007284!5.57e-13!86;UBERON:0000119!1.72e-12!312;UBERON:0000483!1.84e-12!309;UBERON:0000073!2.10e-12!94;UBERON:0001016!2.10e-12!94;UBERON:0001017!2.32e-12!82;UBERON:0000955!2.42e-12!69;UBERON:0006238!2.42e-12!69;UBERON:0005743!4.11e-12!86;UBERON:0000481!7.55e-12!347;UBERON:0002346!7.85e-12!90;UBERON:0000033!1.14e-10!123;UBERON:0001950!2.35e-10!20;UBERON:0002619!3.69e-10!22;UBERON:0000153!4.41e-10!129;UBERON:0007811!4.41e-10!129;UBERON:0002020!5.04e-10!34;UBERON:0003528!5.04e-10!34;UBERON:0002780!6.61e-10!41;UBERON:0001890!6.61e-10!41;UBERON:0006240!6.61e-10!41;UBERON:0004121!9.45e-10!169;UBERON:0001869!1.11e-09!32;UBERON:0001893!1.15e-09!34;UBERON:0003080!1.66e-09!42;UBERON:0000924!3.79e-09!173;UBERON:0006601!3.79e-09!173;UBERON:0002791!7.42e-09!33;UBERON:0000956!2.05e-08!25;UBERON:0000203!2.05e-08!25;UBERON:0000200!8.43e-08!6;UBERON:0000468!1.09e-07!659;UBERON:0000922!1.18e-07!612;UBERON:0003056!1.44e-07!61;UBERON:0000923!1.44e-07!604;UBERON:0005291!1.44e-07!604;UBERON:0006598!1.44e-07!604;UBERON:0002532!1.44e-07!604;UBERON:0002050!1.71e-07!605;UBERON:0005423!1.71e-07!605;UBERON:0000477!8.01e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;2.04e-21;3!UBERON:0002148;1.27e-14;2!UBERON:0006331;1.27e-14;2!UBERON:0009662;1.27e-14;2!UBERON:0002298;5.44e-11;6!UBERON:0002902;1.51e-08;1!UBERON:0009899;1.51e-08;1!UBERON:0002022;3.69e-08;1!UBERON:0002135;3.69e-08;1!UBERON:0007190;3.69e-08;1!UBERON:0002680;1.75e-07;9!UBERON:0001895;1.75e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,5.05e-21,3;UBERON:0002148,2.92e-14,2;UBERON:0006331,2.92e-14,2;UBERON:0009662,2.92e-14,2;UBERON:0002298,8.49e-11,6;UBERON:0000073,7.67e-09,53;UBERON:0002616,7.67e-09,53;UBERON:0010371,1.14e-08,104;UBERON:0002902,1.52e-08,1;UBERON:0009899,1.52e-08,1;UBERON:0002022,2.17e-08,1;UBERON:0002135,2.33e-08,1;UBERON:0001049,2.64e-08,56;UBERON:0005068,2.64e-08,56;UBERON:0006241,2.64e-08,56;UBERON:0007135,2.64e-08,56;UBERON:0000955,4.49e-08,68;UBERON:0006238,4.49e-08,68;UBERON:0007190,4.72e-08,1;UBERON:0002680,2.34e-07,9;UBERON:0001895,2.34e-07,9;UBERON:0010092,2.34e-07,9 | |||
|phase1_expression=1.09007027562334,0.214100523890983,0.704772020479856,0,0,0.872338524100369,0,0,0.261185628199839,0.737201809504527,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0.966304265816484,0.272746120590835,2.29443676311203,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.768251997860379,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,1.87467667973554,0.503946384596579,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,4.58386110669933,3.51652341630141,3.4214489204541,0.411309970813294,0,0,0.112131084345361,0,0,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0,0,0,0.902838299183157,0,0,0,0.184369168541703,0.0868836144680828,0.587403472388222,0.343143423810856,0,0,0,0,0,0,1.24053903909388,0.306923946576125,0,1.02511319404561,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0.246381468041427,0.519254429183621,0,0,2.00506470303285,0,0.114814448164607,0.182091168006717,0.393373244878272,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.290012154876366,0,0,0,0.107420244868274,0.725083469571143,0,0,0.330569830721956,0.576570202095319,0.255225424989168,0.10115778085555,0,0.62962469366128,0.6970372701606,0,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0.767693373934002,0.42793898803392,0.318203247925937,0,0.539617372749944,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,0,0,0.136499911407986,0.707027159768564,0,1.10273068709225,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0.192444225451024,0,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0.969332746095218,1.11321717794222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.774054819518572,0.591095237907095,0.87754158861589,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,1.01297273529406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,1.39641200636127,0.229160424011684,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,1.57948847310864,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,1.0342636508924,1.05786081394152,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0.655745261419609,0,0.886068179966986,0.366078794705889,0.625954653532499,0,0.554645257684261,0.683060432355218,0,0,1.81978941049977,3.71104933608458,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0.604923695052956,0.466311601748341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.127894371303652,0.107824811396682,0,0.218419276384028,0,0,0,0,0,0,0,0,0.6124909547064,0.642292250964595,0,0.478901577171454,0.615349092722265,0,2.21303207885497,0.807378228159255,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,1.08060135389431,0,0.206686796501184,0.824405532520789,0.546974809018219,0,0.496211178389294,0,0,1.07140367175657,0,0,0,0,0,0,2.17503145525861,0.986591603442736,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.714765441766563,0,0,0,0.801711364730253,0,0,0,0,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,1.35982980381829,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=1.09007027562334,0.214100523890983,0.704772020479856,0,0,0.872338524100369,0,0,0.261185628199839,0.737201809504527,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0.966304265816484,0.272746120590835,2.29443676311203,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.768251997860379,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,1.87467667973554,0.503946384596579,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,4.58386110669933,3.51652341630141,3.4214489204541,0.411309970813294,0,0,0.112131084345361,0,0,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0,0,0,0.902838299183157,0,0,0,0.184369168541703,0.0868836144680828,0.587403472388222,0.343143423810856,0,0,0,0,0,0,1.24053903909388,0.306923946576125,0,1.02511319404561,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0.246381468041427,0.519254429183621,0,0,2.00506470303285,0,0.114814448164607,0.182091168006717,0.393373244878272,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.290012154876366,0,0,0,0.107420244868274,0.725083469571143,0,0,0.330569830721956,0.576570202095319,0.255225424989168,0.10115778085555,0,0.62962469366128,0.6970372701606,0,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0.767693373934002,0.42793898803392,0.318203247925937,0,0.539617372749944,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,0,0,0.136499911407986,0.707027159768564,0,1.10273068709225,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0.192444225451024,0,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0.969332746095218,1.11321717794222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.774054819518572,0.591095237907095,0.87754158861589,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,1.01297273529406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,1.39641200636127,0.229160424011684,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,1.57948847310864,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,1.0342636508924,1.05786081394152,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0.655745261419609,0,0.886068179966986,0.366078794705889,0.625954653532499,0,0.554645257684261,0.683060432355218,0,0,1.81978941049977,3.71104933608458,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0.604923695052956,0.466311601748341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.127894371303652,0.107824811396682,0,0.218419276384028,0,0,0,0,0,0,0,0,0.6124909547064,0.642292250964595,0,0.478901577171454,0.615349092722265,0,2.21303207885497,0.807378228159255,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,1.08060135389431,0,0.206686796501184,0.824405532520789,0.546974809018219,0,0.496211178389294,0,0,1.07140367175657,0,0,0,0,0,0,2.17503145525861,0.986591603442736,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.714765441766563,0,0,0,0.801711364730253,0,0,0,0,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,1.35982980381829,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@CYGB | |short_description=p13@CYGB | ||
}} | }} |
Latest revision as of 15:33, 17 September 2015
Short description: | p13@CYGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CYGB_5end |
Coexpression cluster: | NA |
Association with transcript: | 106bp_to_ENST00000293230, NM_134268, uc002jru.1_5end |
EntrezGene: | CYGB |
HGNC: | 16505 |
UniProt: | Q8WWM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.39e-22 | 3 |
cardiac muscle cell | 1.96e-10 | 3 |
cardiac muscle myoblast | 1.96e-10 | 3 |
striated muscle cell | 4.90e-08 | 4 |
melanocyte | 4.11e-07 | 10 |
melanoblast | 4.11e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
pons | 5.05e-21 | 3 |
locus ceruleus | 2.92e-14 | 2 |
brainstem nucleus | 2.92e-14 | 2 |
hindbrain nucleus | 2.92e-14 | 2 |
brainstem | 8.49e-11 | 6 |
regional part of nervous system | 7.67e-09 | 53 |
regional part of brain | 7.67e-09 | 53 |
ecto-epithelium | 1.14e-08 | 104 |
occipital pole | 1.52e-08 | 1 |
pole of cerebral hemisphere | 1.52e-08 | 1 |
insula | 2.17e-08 | 1 |
mitral valve | 2.33e-08 | 1 |
neural tube | 2.64e-08 | 56 |
neural rod | 2.64e-08 | 56 |
future spinal cord | 2.64e-08 | 56 |
neural keel | 2.64e-08 | 56 |
brain | 4.49e-08 | 68 |
future brain | 4.49e-08 | 68 |
paracentral gyrus | 4.72e-08 | 1 |
regional part of metencephalon | 2.34e-07 | 9 |
metencephalon | 2.34e-07 | 9 |
future metencephalon | 2.34e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.05e-15 | 2 |