FFCP PHASE1:Hg19::chr17:74536118..74536138,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=768206 | |EntrezGene=768206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32528 | |HGNC=32528 | ||
|TSSclassifier=strong | |||
|UniProt=Q00LT1 | |UniProt=Q00LT1 | ||
|association_with_transcript=0bp_to_ENST00000397630,NM_001077620,uc002jrx.2_5end | |association_with_transcript=0bp_to_ENST00000397630,NM_001077620,uc002jrx.2_5end | ||
|cluster_id=chr17:74536118..74536138,+ | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_2_at_PRCD_5end | |description=CAGE_peak_2_at_PRCD_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!3.03e-16!5 | |ontology_enrichment_celltype=CL:0002322!3.03e-16!5 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.99e-11;3 | |ontology_enrichment_development_v019=UBERON:0003056;8.99e-11;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;2.26e-08;4 | |ontology_enrichment_disease_v019=DOID:5409;2.26e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!3.75e-19!2;UBERON:0002757!3.75e-19!2;UBERON:0010134!3.75e-19!2;UBERON:0002784!3.75e-19!2;UBERON:0005408!3.75e-19!2;UBERON:0001899!3.75e-19!2;UBERON:0003076!3.70e-14!15;UBERON:0003057!3.70e-14!15;UBERON:0001896!1.78e-12!3;UBERON:0005290!1.78e-12!3;UBERON:0010096!1.78e-12!3;UBERON:0004733!1.35e-11!12;UBERON:0002028!1.35e-11!12;UBERON:0007277!1.35e-11!12;UBERON:0004732!1.02e-10!13;UBERON:0003075!2.26e-10!86;UBERON:0007284!2.26e-10!86;UBERON:0002298!3.18e-10!8;UBERON:0005743!3.20e-10!86;UBERON:0003296!4.86e-10!4;UBERON:0010133!4.86e-10!4;UBERON:0002146!5.79e-10!1;UBERON:0005623!5.79e-10!1;UBERON:0002346!7.72e-10!90;UBERON:0000073!4.15e-09!94;UBERON:0001016!4.15e-09!94;UBERON:0001017!8.03e-09!82;UBERON:0000966!4.30e-08!5;UBERON:0005388!4.30e-08!5;UBERON:0001802!4.30e-08!5;UBERON:0007023!2.29e-07!115;UBERON:0000955!8.26e-07!69;UBERON:0006238!8.26e-07!69 | |ontology_enrichment_uberon=UBERON:0001905!3.75e-19!2;UBERON:0002757!3.75e-19!2;UBERON:0010134!3.75e-19!2;UBERON:0002784!3.75e-19!2;UBERON:0005408!3.75e-19!2;UBERON:0001899!3.75e-19!2;UBERON:0003076!3.70e-14!15;UBERON:0003057!3.70e-14!15;UBERON:0001896!1.78e-12!3;UBERON:0005290!1.78e-12!3;UBERON:0010096!1.78e-12!3;UBERON:0004733!1.35e-11!12;UBERON:0002028!1.35e-11!12;UBERON:0007277!1.35e-11!12;UBERON:0004732!1.02e-10!13;UBERON:0003075!2.26e-10!86;UBERON:0007284!2.26e-10!86;UBERON:0002298!3.18e-10!8;UBERON:0005743!3.20e-10!86;UBERON:0003296!4.86e-10!4;UBERON:0010133!4.86e-10!4;UBERON:0002146!5.79e-10!1;UBERON:0005623!5.79e-10!1;UBERON:0002346!7.72e-10!90;UBERON:0000073!4.15e-09!94;UBERON:0001016!4.15e-09!94;UBERON:0001017!8.03e-09!82;UBERON:0000966!4.30e-08!5;UBERON:0005388!4.30e-08!5;UBERON:0001802!4.30e-08!5;UBERON:0007023!2.29e-07!115;UBERON:0000955!8.26e-07!69;UBERON:0006238!8.26e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.02e-57;2!UBERON:0002757;2.02e-57;2!UBERON:0010134;2.02e-57;2!UBERON:0005408;2.02e-57;2!UBERON:0001899;2.02e-57;2!UBERON:0003296;2.37e-29;4!UBERON:0010133;2.37e-29;4!UBERON:0002784;2.37e-29;4!UBERON:0001894;2.90e-17;7!UBERON:0002360;2.74e-15;2!UBERON:0000094;2.74e-15;2!UBERON:0010743;2.74e-15;2!UBERON:0000966;5.70e-07;5!UBERON:0005388;5.70e-07;5!UBERON:0001802;5.70e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001905;2.02e-57;2!UBERON:0002757;2.02e-57;2!UBERON:0010134;2.02e-57;2!UBERON:0005408;2.02e-57;2!UBERON:0001899;2.02e-57;2!UBERON:0003296;2.37e-29;4!UBERON:0010133;2.37e-29;4!UBERON:0002784;2.37e-29;4!UBERON:0001894;2.90e-17;7!UBERON:0002360;2.74e-15;2!UBERON:0000094;2.74e-15;2!UBERON:0010743;2.74e-15;2!UBERON:0000966;5.70e-07;5!UBERON:0005388;5.70e-07;5!UBERON:0001802;5.70e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.02e-57,2;UBERON:0002757,2.02e-57,2;UBERON:0010134,2.02e-57,2;UBERON:0005408,2.02e-57,2;UBERON:0001899,2.02e-57,2;UBERON:0003296,2.37e-29,4;UBERON:0010133,2.37e-29,4;UBERON:0002784,2.37e-29,4;UBERON:0001894,2.90e-17,7;UBERON:0006222,2.90e-17,7;UBERON:0002360,2.74e-15,2;UBERON:0000094,2.74e-15,2;UBERON:0010743,2.74e-15,2 | |||
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|short_description=p2@PRCD | |short_description=p2@PRCD | ||
}} | }} |
Latest revision as of 15:38, 17 September 2015
Short description: | p2@PRCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRCD_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000397630, NM_001077620, uc002jrx.2_5end |
EntrezGene: | PRCD |
HGNC: | 32528 |
UniProt: | Q00LT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.02e-57 | 2 |
regional part of epithalamus | 2.02e-57 | 2 |
secretory circumventricular organ | 2.02e-57 | 2 |
circumventricular organ | 2.02e-57 | 2 |
epithalamus | 2.02e-57 | 2 |
gland of diencephalon | 2.37e-29 | 4 |
neuroendocrine gland | 2.37e-29 | 4 |
regional part of diencephalon | 2.37e-29 | 4 |
diencephalon | 2.90e-17 | 7 |
future diencephalon | 2.90e-17 | 7 |
meninx | 2.74e-15 | 2 |
membrane organ | 2.74e-15 | 2 |
meningeal cluster | 2.74e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.26e-08 | 4 |