FFCP PHASE2:Hg19::chr8:24774703..24774742,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4741 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:7734 ...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=7734 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9UK51 | ||
|association_with_transcript=23bp_to_AF181990_5end | |association_with_transcript=23bp_to_AF181990_5end | ||
|cluster_id=chr8:24774703..24774742,+ | |cluster_id=chr8:24774703..24774742,+ | ||
Latest revision as of 15:46, 17 September 2015
| Short description: | p6@NEFM |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_NEFM_5end |
| Coexpression cluster: | C261_locus_medial_parietal_pons_diencephalon_olfactory_spinal |
| Association with transcript: | 23bp_to_AF181990_5end |
| EntrezGene: | NEFM |
| HGNC: | 7734 |
| UniProt: | Q9UK51 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@NEFM |
|---|
0
25
50
75
100
125
150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 3.88e-117 | 56 |
| neural rod | 3.88e-117 | 56 |
| future spinal cord | 3.88e-117 | 56 |
| neural keel | 3.88e-117 | 56 |
| regional part of nervous system | 3.09e-107 | 53 |
| regional part of brain | 3.09e-107 | 53 |
| brain | 1.37e-92 | 68 |
| future brain | 1.37e-92 | 68 |
| central nervous system | 3.65e-92 | 81 |
| regional part of forebrain | 6.87e-91 | 41 |
Showing 1 to 10 of 98 entries
