FFCP PHASE1:Hg19::chr6:30294739..30294754,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56658 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10065 | |||
|TSSclassifier=strong | |||
|UniProt=A2AAZ3 | |||
|association_with_transcript=5bp_to_ENST00000428404_5end | |||
|cluster_id=chr6:30294739..30294754,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_7_at_TRIM39_5end | |||
|id=chr6:30294739..30294754,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.12e-13!140;CL:0002057!4.15e-13!42;CL:0000037!4.61e-12!172;CL:0000566!4.61e-12!172;CL:0000860!1.56e-11!45;CL:0002032!1.71e-11!165;CL:0000837!1.71e-11!165;CL:0000988!6.63e-11!182;CL:0002087!1.29e-09!119;CL:0000766!1.73e-09!76;CL:0002031!3.48e-09!124;CL:0000763!2.33e-08!112;CL:0000049!2.33e-08!112;CL:0000557!2.14e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000094;7.63e-12;8!CL:0000624;1.94e-11;6!CL:0000576;2.64e-10;48!CL:0000766;3.96e-10;69!CL:0002393;5.75e-10;6!CL:0002397;5.75e-10;6!CL:0000860;6.34e-10;33!CL:0002057;6.34e-10;33!CL:0002087;1.84e-09;104!CL:0000791;8.75e-09;18!CL:0000789;8.75e-09;18!CL:0002419;8.75e-09;18!CL:0000081;3.35e-08;11!CL:0000775;3.55e-07;3!CL:0000623;6.18e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.58e-29,136;CL:0000037,2.02e-23,168;CL:0002087,6.98e-23,115;CL:0002031,1.97e-22,120;CL:0002032,4.62e-22,161;CL:0000837,4.62e-22,161;CL:0000988,2.50e-21,177;CL:0000860,2.28e-20,42;CL:0002057,2.28e-20,42;CL:0000766,2.37e-19,72;CL:0000473,7.49e-17,48;CL:0000234,7.49e-17,48;CL:0000557,4.62e-15,67;CL:0002009,6.67e-15,61;CL:0002393,2.48e-14,9;CL:0002397,2.48e-14,9;CL:0000763,3.93e-13,108;CL:0000049,3.93e-13,108;CL:0002194,4.34e-13,59;CL:0000576,4.34e-13,59;CL:0000040,4.34e-13,59;CL:0000559,4.34e-13,59;CL:0000839,6.89e-12,66;CL:0000094,7.67e-12,8;CL:0000624,2.41e-11,6;CL:0000838,3.09e-09,52;CL:0000542,5.87e-09,53;CL:0000051,5.87e-09,53;CL:0000791,9.99e-09,18;CL:0000789,9.99e-09,18;CL:0002420,9.99e-09,18;CL:0002419,9.99e-09,18;CL:0000790,9.99e-09,18;CL:0000081,3.36e-08,11;CL:0000775,3.55e-07,3;CL:0000623,6.06e-07,3;CL:0000825,6.06e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-13;42!CL:0000790;8.75e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.79e-09!102;UBERON:0003061!3.79e-09!102;UBERON:0002193!2.88e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.94e-09;15!UBERON:0000179;1.94e-09;15!UBERON:0000463;1.94e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.09e-19,98;UBERON:0003061,2.09e-19,98;UBERON:0002193,1.69e-16,108;UBERON:0002371,2.73e-13,76;UBERON:0001474,1.35e-12,82;UBERON:0004765,1.02e-10,90;UBERON:0002405,2.69e-10,93;UBERON:0000178,1.30e-09,15;UBERON:0000179,1.30e-09,15;UBERON:0000463,1.30e-09,15;UBERON:0001434,7.96e-09,100 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0.0821005894499457,0,3.14691421479123,0.767658796194425,1.23852898652861,0,0.30120591877825,0.369754010166788,0.309868802321207,0,1.17440175733939,2.76997704265939,2.60707781711184,2.38711957787437,0.671746422719773,0,0,0.581592955118259,0.755751887377619,0.242584061187816,0.697287110717054,1.23350366406548,1.23882548358041,1.1507695692886,0.512321413058201,2.12834006899727,2.41321976515633,0,0,1.50593871634084,0.545812300115692,1.12361742222542,3.06083892370903,2.56743221660875,2.55734850319616,0.659702600373432,0.398927315243264,1.27867425159808,2.03146467040009,1.70215567407342,1.24564449799115,0.75374599577023,1.0429658368404,0.217188844705117,1.81619850790011,2.20966581592539,0.632924774881769,1.05627643155971,1.70083439972035,1.88692780957538,0.44931452458598,0.300353785683013,0.16072558669708,1.42506371870624,1.39241674039363,1.46131323011707,0,0,2.66852776159066,2.56038133539904,0,1.14950487990897,1.32208974556972,0.954053754535364,8.53819453664173,2.93618594685469,4.20500550937752,3.96513985737078,1.12101712596307,0.526768169550154,2.16380747125216,3.53709686474248,9.25206745497792,1.00311897234407,4.56291173287027,2.8406868344084,3.89653456815823,0.779873198196215,1.17842362989935,1.99380505125259,1.08321545506006,0.768547918354051,0.780356085359269,0.328875809207352,0.552700035571697,0.869409257205157,3.85545064221357,3.21048993707656,3.1360657141493,0.679856056185397,6.13152789763074,8.24705869158312,3.28925599625354,0.95569624297229,0.651083453856419,0,1.20460095262218,0.255973222308837,0,0,0,5.24177532384304,6.95344509037119,5.35850294366356,0,0,0,0,0,0.144846518960824,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.175669571386252,0.523916301990851,0,0,0.324547393654683,0,0.531831842075461,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0.258416759169329,0.71153252537342,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.267899184852239,0.22452937262617,0.225222960966644,0,0.949265659568129,0,34.2629085333764,31.022421131866,0.436094052142534,0.993943903390637,0.12663051166458,0.926864265692532,0.286836620748814,0,0,1.06748995729705,0,0.311211035399766,0.269421344139376,0,0.302714855289863,0,0,0,0,0.149448680551801,0.352303495931295,0,0.561803226808994,0.204154171254893,0.122834317311768,0.309977343527296,2.37600571456411,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0,0.300476117813194,0.226864366320042,0,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0,0.843881661206331,0.487185025805993,1.00973509697646,0.184099797284599,0.484938170456436,1.42003837006646,0,0.169560592310488,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.518305275076852,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0.769494313892781,0.738155454624648,0,0.4115740113314,0,0,0,0,0.441463099414651,0.491953754172454,0,0.219500570817251,0,0.301586917234893,0,0.325808305310325,0,0,0.115930404975077,0.352226082707465,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.264145302039678,1.03664057770386,0.864719720501769,0.88369703398466,0.317489471460845,0,0,0,0.205654985406647,0,0,0.224262168690721,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0,0.904318131178758,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0.448340575974109,3.54655368363469,7.11570997036407,7.44389610422541,0.254094624222463,0,0,0.167516265334349,1.27587750330633,13.4821264310493,8.97484377612075,14.5045429702612,0.49076596687656,0,0.542530047399471,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0.391602314925481,0.686286847621712,0.620304078368662,2.15714200818617,1.17400313583789,0,0,0.907170879989041,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,1.03850885836724,0.116210378459959,0.483437798366489,0.200506470303285,0.460404944679482,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0.784349769176855,1.46139224653261,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0.183138929636687,0.165018999841176,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.275673144969061,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.576570202095319,1.02090169995667,0.10115778085555,0,1.5740617341532,0,0,0,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,0.359744915166629,0.274537029736055,0,0.606547444719948,0,0,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| |||
|short_description=p7@TRIM39 | |||
}} |
Latest revision as of 16:29, 17 September 2015
Short description: | p7@TRIM39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TRIM39_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 5bp_to_ENST00000428404_5end |
EntrezGene: | TRIM39 |
HGNC: | 10065 |
UniProt: | A2AAZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.09e-19 | 98 |
blood island | 2.09e-19 | 98 |
hemolymphoid system | 1.69e-16 | 108 |
bone marrow | 2.73e-13 | 76 |
bone element | 1.35e-12 | 82 |
skeletal element | 1.02e-10 | 90 |
immune system | 2.69e-10 | 93 |
blood | 1.30e-09 | 15 |
haemolymphatic fluid | 1.30e-09 | 15 |
organism substance | 1.30e-09 | 15 |
skeletal system | 7.96e-09 | 100 |