FFCP PHASE1:Hg19::chr9:71736134..71736154,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:71736134..71736154,+ to FFCP PHASE1:Hg19::chr9:71736134..71736154,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9414 | |EntrezGene=9414 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11828 | |HGNC=11828 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z2R3 | |UniProt=B7Z2R3 | ||
|association_with_transcript=-25bp_to_NM_001170414_5end | |||
|cluster_id=chr9:71736134..71736154,+ | |||
|description=CAGE_peak_9_at_TJP2_5end | |||
|id=chr9:71736134..71736154,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.65e-18!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.58e-08;7!CL:0000586;4.58e-08;7!CL:0000182;3.84e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.27e-08,7;CL:0000586,3.27e-08,7;CL:0000182,3.84e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.05e-11;11!UBERON:0001041;1.84e-09;30!UBERON:0009497;2.74e-09;13!UBERON:0003104;1.97e-07;31 | |||
|ontology_enrichment_disease=DOID:305!6.84e-21!106;DOID:0050687!3.50e-13!143;DOID:162!1.15e-07!235;DOID:299!4.28e-07!25;DOID:14566!5.49e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.27e-08;2!DOID:1325;1.20e-07;7!DOID:3904;1.20e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.86e-08,2;DOID:1325,8.06e-08,7;DOID:3904,8.06e-08,7;DOID:305,8.74e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.07e-10!155;UBERON:0001555!1.07e-10!155;UBERON:0007026!1.07e-10!155;UBERON:0004119!1.95e-10!169;UBERON:0000925!1.95e-10!169;UBERON:0006595!1.95e-10!169;UBERON:0004921!2.48e-10!129;UBERON:0004185!2.48e-10!129;UBERON:0000481!1.60e-07!347;UBERON:0000077!1.95e-07!130;UBERON:0000477!2.26e-07!286;UBERON:0000064!3.26e-07!219;UBERON:0004111!3.38e-07!241;UBERON:0000468!7.69e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.28e-10;22!UBERON:0000160;2.19e-08;17!UBERON:0002107;4.47e-08;19!UBERON:0006925;4.47e-08;19!UBERON:0002423;1.52e-07;25!UBERON:0002108;7.97e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.46e-09,101;UBERON:0009856,3.73e-09,26;UBERON:0005172,5.82e-09,54;UBERON:0005173,5.82e-09,54;UBERON:0005409,8.09e-09,25;UBERON:0009854,2.42e-08,23;UBERON:0000160,2.88e-08,17;UBERON:0004921,3.00e-08,118;UBERON:0002107,3.63e-08,19;UBERON:0006925,3.63e-08,19;UBERON:0008836,3.63e-08,19;UBERON:0002417,9.33e-08,60;UBERON:0000916,9.33e-08,60;UBERON:0007499,1.02e-07,25;UBERON:0009497,1.40e-07,25;UBERON:0000015,1.40e-07,25;UBERON:0002423,1.40e-07,25;UBERON:0006235,1.40e-07,25;UBERON:0004161,1.40e-07,25;UBERON:0008835,6.64e-07,22;UBERON:0003894,6.64e-07,22;UBERON:0002108,7.33e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0.572471974262113,0.136874425072884,1.50651167513763,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0.79504962946682,0,0.347140501607594,1.13061588384802,0.838998872419812,0,0.626984899610432,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,0,0.535798369704479,0.673588117878509,0.788280363383256,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0.323745888736263,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0.121973706129595,0.795178609928912,0.580969714347592,0.621966330092223,1.00928340350251,0.72995471815166,0,0,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0.330881918197182,0.435758888184812,0,0.134831308160164,0.588664395376038,0,0,0,0,0,1.26755034821831,0,0.590789906681404,1.32438929824395,0.614942192715568,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0,0,0,0,0,0.771622122786426,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0.451199612907412,1.07821471946181,0,1.46139224653261,0.73886140225013,0,0.340187410553031,0.215915916102139,0,0.270946437543853,1.50506932156456,0.764628819135115,2.49322802678617,0.895499018888713,0,0.261435451024901,0.512900250232778,0.328014645699706,0,1.854738209659,0.732555718546747,0.82509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.941438007767792,0,0,0.443430153536676,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0,0,0.980160863924127,0,0.28853842595289,0.355709216742071,0.478278818186467,0,0,0.635020748171649,0,0.561594356226918,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.556812347790485,0,0,1.33228787199128,0,1.8714054040822,0.146508179271894,0.36408156524854,0,0,0.71623345421307,0,0.307160702099232,0,0.281338832821026,0,0,0,0.796991953004279,1.10513566212459,0.251932747854276,0,0,0,0.449341755736634,0.716084698702437,0,0.197286811273867,0,0,0,0,0,0.520855522170466,0.349839999984783,0,0.568967241427498,2.2882828526349,1.41832609060762,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0,0.21787692703798,0.139423744278603,0.230850775511391,0,1.61394733071642,2.87224462111271,0.651884231532048,1.27600463892768,0,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0.843992258112108,0.326465616318295,0.565412285735763,0,0.995261931078505,3.18447232212021,2.4441205797345,0,0,0,0.202203398942031,0,0.234264445725339,0,1.17398771359254,0,0.394584402849391,1.20990716048664,0.30607276163049,0.189559738885464,0,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0,0,1.04135843001079,0.195984794828755,0.609414446062818,0,0,0.0967563312890851,0.65780385377567,0.739039113478883,0.484945082442097,0,0.225980740780532,0,0,0,1.17330829640882,0.160317640503067,0,0.19980960958213,0.432271251462318,1.25990255782507,0,0.14405479798815,0,0.942776138467182,0.135904206073614,0.104602846312333,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0.717873024576814,0.998395002494955,1.28767814440971,0.89268582976749,1.07493555978762,0,3.49487848582361,3.54524320382506,2.96697090172199,3.16796656114669,0.196854963029498,0,0,0.408610218334727,0.482259445395058,1.10031549277787,0.83088067605837,0,0,0.182248669974074,0.335434687599266,0.315222829196793,1.36381929150995,0,0,0.959575986597226,0,1.32418394073086,0,0,0,0,0,0,0,0,1.75862680413699,3.97520666736664,0.387848869084652,0.26446520348538,0,0,0.320362237703084,0.78602152549833,0,0,0,0.121792598380896,1.27668251554036,0,0,0,0,2.04170325125305,0,0,0.250381861413,0.573409195690071,0.332787154610557,0.18628920882415,0,0.37494122388632,0,0,0,2.34167452903441,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,1.26184898228651,0,0.214441591374926,0,0.226705925512272,0.694567422971502,0.244736704506468,0,0,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0.303859956177382,0.276516872303462,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,2.85538840518309,0.0981477185010256,0.11796972334774,0.366857197043358,0.115525666150338,0,0,0,0,0,0,4.45241380618418,0.49131575253029,0.591424344868181,0,0,0.413373593002368,0,0,0,0,0,0.638812138197976,0.535701835878287,0,0,0,0.887023701626388,0.115233987555779,0,0.203909198930495,0,0.709163045303809,0.333694205676207,0.470958557103084,0.314231179832004,1.12108865325516,0,0.215927591218621,0.9555033757741,0.142953088353313,0.316027223465453,0,0,0,0.207216164163037,0,0,0,0,0,1.27016115057279,0.68732060563215,0.31020638566432,0,0.335566295393377,2.0611549059201,2.19452264968085,0,0,0,0,4.2109103423179,0,0,1.58124514854544,0.109940516745429,1.35866559210006,6.25110680674352,1.31135736302374,0,0,0.942706188406504,0.392616934229891,0.594092800654172,0,0,0,0,0,0,0,0.240724100067505,0,0,0.573358332605805,0.157771562193185,0,0.872701380680755,2.645134202577,0,0.462175628631418,0,0.504665699340316,0.327796715891087,0,2.44773191380756,0.534434810531121,2.38926738790597,0.50141507858475,0.0757786982182394,0.267964130156178,1.65833887891756,0.413731983447581,0,0,0.193766729508018,0.434523000071005,0.112131862580613,0.572824424503484,0.606351566874658,0,0.684466602170562,0.336760265072938,0.573777643141411,0,1.54666210360852,0.747091421144008,0,0.538951212639521,4.69281884806909,0,0,1.99727032255654,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0.572471974262113,0.136874425072884,1.50651167513763,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0.79504962946682,0,0.347140501607594,1.13061588384802,0.838998872419812,0,0.626984899610432,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,0,0.535798369704479,0.673588117878509,0.788280363383256,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0.323745888736263,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0.121973706129595,0.795178609928912,0.580969714347592,0.621966330092223,1.00928340350251,0.72995471815166,0,0,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0.330881918197182,0.435758888184812,0,0.134831308160164,0.588664395376038,0,0,0,0,0,1.26755034821831,0,0.590789906681404,1.32438929824395,0.614942192715568,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0,0,0,0,0,0.771622122786426,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0.451199612907412,1.07821471946181,0,1.46139224653261,0.73886140225013,0,0.340187410553031,0.215915916102139,0,0.270946437543853,1.50506932156456,0.764628819135115,2.49322802678617,0.895499018888713,0,0.261435451024901,0.512900250232778,0.328014645699706,0,1.854738209659,0.732555718546747,0.82509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.941438007767792,0,0,0.443430153536676,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0,0,0.980160863924127,0,0.28853842595289,0.355709216742071,0.478278818186467,0,0,0.635020748171649,0,0.561594356226918,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.556812347790485,0,0,1.33228787199128,0,1.8714054040822,0.146508179271894,0.36408156524854,0,0,0.71623345421307,0,0.307160702099232,0,0.281338832821026,0,0,0,0.796991953004279,1.10513566212459,0.251932747854276,0,0,0,0.449341755736634,0.716084698702437,0,0.197286811273867,0,0,0,0,0,0.520855522170466,0.349839999984783,0,0.568967241427498,2.2882828526349,1.41832609060762,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0,0.21787692703798,0.139423744278603,0.230850775511391,0,1.61394733071642,2.87224462111271,0.651884231532048,1.27600463892768,0,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0.843992258112108,0.326465616318295,0.565412285735763,0,0.995261931078505,3.18447232212021,2.4441205797345,0,0,0,0.202203398942031,0,0.234264445725339,0,1.17398771359254,0,0.394584402849391,1.20990716048664,0.30607276163049,0.189559738885464,0,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0,0,1.04135843001079,0.195984794828755,0.609414446062818,0,0,0.0967563312890851,0.65780385377567,0.739039113478883,0.484945082442097,0,0.225980740780532,0,0,0,1.17330829640882,0.160317640503067,0,0.19980960958213,0.432271251462318,1.25990255782507,0,0.14405479798815,0,0.942776138467182,0.135904206073614,0.104602846312333,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0.717873024576814,0.998395002494955,1.28767814440971,0.89268582976749,1.07493555978762,0,3.49487848582361,3.54524320382506,2.96697090172199,3.16796656114669,0.196854963029498,0,0,0.408610218334727,0.482259445395058,1.10031549277787,0.83088067605837,0,0,0.182248669974074,0.335434687599266,0.315222829196793,1.36381929150995,0,0,0.959575986597226,0,1.32418394073086,0,0,0,0,0,0,0,0,1.75862680413699,3.97520666736664,0.387848869084652,0.26446520348538,0,0,0.320362237703084,0.78602152549833,0,0,0,0.121792598380896,1.27668251554036,0,0,0,0,2.04170325125305,0,0,0.250381861413,0.573409195690071,0.332787154610557,0.18628920882415,0,0.37494122388632,0,0,0,2.34167452903441,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,1.26184898228651,0,0.214441591374926,0,0.226705925512272,0.694567422971502,0.244736704506468,0,0,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0.303859956177382,0.276516872303462,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,2.85538840518309,0.0981477185010256,0.11796972334774,0.366857197043358,0.115525666150338,0,0,0,0,0,0,4.45241380618418,0.49131575253029,0.591424344868181,0,0,0.413373593002368,0,0,0,0,0,0.638812138197976,0.535701835878287,0,0,0,0.887023701626388,0.115233987555779,0,0.203909198930495,0,0.709163045303809,0.333694205676207,0.470958557103084,0.314231179832004,1.12108865325516,0,0.215927591218621,0.9555033757741,0.142953088353313,0.316027223465453,0,0,0,0.207216164163037,0,0,0,0,0,1.27016115057279,0.68732060563215,0.31020638566432,0,0.335566295393377,2.0611549059201,2.19452264968085,0,0,0,0,4.2109103423179,0,0,1.58124514854544,0.109940516745429,1.35866559210006,6.25110680674352,1.31135736302374,0,0,0.942706188406504,0.392616934229891,0.594092800654172,0,0,0,0,0,0,0,0.240724100067505,0,0,0.573358332605805,0.157771562193185,0,0.872701380680755,2.645134202577,0,0.462175628631418,0,0.504665699340316,0.327796715891087,0,2.44773191380756,0.534434810531121,2.38926738790597,0.50141507858475,0.0757786982182394,0.267964130156178,1.65833887891756,0.413731983447581,0,0,0.193766729508018,0.434523000071005,0.112131862580613,0.572824424503484,0.606351566874658,0,0.684466602170562,0.336760265072938,0.573777643141411,0,1.54666210360852,0.747091421144008,0,0.538951212639521,4.69281884806909,0,0,1.99727032255654,0.201273793591026,0 | ||
|short_description=p9@TJP2 | |||
}} | }} |
Latest revision as of 16:41, 17 September 2015
Short description: | p9@TJP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TJP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_NM_001170414_5end |
EntrezGene: | TJP2 |
HGNC: | 11828 |
UniProt: | B7Z2R3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.27e-08 | 7 |
germ cell | 3.27e-08 | 7 |
hepatocyte | 3.84e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 2.46e-09 | 101 |
sac | 3.73e-09 | 26 |
abdomen element | 5.82e-09 | 54 |
abdominal segment element | 5.82e-09 | 54 |
gastrointestinal system | 8.09e-09 | 25 |
digestive tract diverticulum | 2.42e-08 | 23 |
intestine | 2.88e-08 | 17 |
subdivision of digestive tract | 3.00e-08 | 118 |
liver | 3.63e-08 | 19 |
digestive gland | 3.63e-08 | 19 |
liver bud | 3.63e-08 | 19 |
abdominal segment of trunk | 9.33e-08 | 60 |
abdomen | 9.33e-08 | 60 |
epithelial sac | 1.02e-07 | 25 |
epithelium of foregut-midgut junction | 1.40e-07 | 25 |
anatomical boundary | 1.40e-07 | 25 |
hepatobiliary system | 1.40e-07 | 25 |
foregut-midgut junction | 1.40e-07 | 25 |
septum transversum | 1.40e-07 | 25 |
hepatic diverticulum | 6.64e-07 | 22 |
liver primordium | 6.64e-07 | 22 |
small intestine | 7.33e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.86e-08 | 2 |
bronchus cancer | 8.06e-08 | 7 |
bronchogenic carcinoma | 8.06e-08 | 7 |
carcinoma | 8.74e-08 | 106 |