FFCP PHASE1:Hg19::chr3:197640146..197640157,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84223 | |EntrezGene=84223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25251 | |HGNC=25251 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000478903,uc003fym.2_5end | |association_with_transcript=0bp_to_ENST00000478903,uc003fym.2_5end | ||
|cluster_id=chr3:197640146..197640157,- | |||
|description=CAGE_peak_7_at_IQCG_5end | |description=CAGE_peak_7_at_IQCG_5end | ||
|id=chr3:197640146..197640157,- | |id=chr3:197640146..197640157,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;2.66e-18;1!CL:0002625;2.66e-18;1!CL:0000216;2.66e-18;1!CL:0002174;6.23e-18;1!CL:0000501;6.23e-18;1!CL:0000174;7.70e-07;3!CL:0002521;7.70e-07;3 | |ontology_enrichment_celltype_v019=CL:0000511;2.66e-18;1!CL:0002625;2.66e-18;1!CL:0000216;2.66e-18;1!CL:0002174;6.23e-18;1!CL:0000501;6.23e-18;1!CL:0000174;7.70e-07;3!CL:0002521;7.70e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.66e-18,1;CL:0002625,2.66e-18,1;CL:0000216,2.66e-18,1;CL:0002174,6.23e-18,1;CL:0000501,6.23e-18,1;CL:0000174,7.70e-07,3;CL:0002521,8.15e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.10e-13!14;DOID:193!4.82e-07!29 | |ontology_enrichment_disease=DOID:2394!1.10e-13!14;DOID:193!4.82e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.47e-19;14!DOID:193;2.61e-14;29!DOID:120;4.07e-10;27 | |ontology_enrichment_disease_v019=DOID:2394;3.47e-19;14!DOID:193;2.61e-14;29!DOID:120;4.07e-10;27 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,3.08e-19,14;DOID:193,2.43e-14,29;DOID:120,3.83e-10,27 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002119;1.52e-37;4!UBERON:0000992;8.07e-32;13!UBERON:0000991;2.92e-28;21!UBERON:0001136;2.66e-18;1!UBERON:0001343;2.66e-18;1!UBERON:0004910;2.66e-18;1!UBERON:0004813;2.66e-18;1!UBERON:0004909;7.98e-10;2!UBERON:0003134;1.70e-09;33!UBERON:0003100;3.07e-09;41!UBERON:0003133;7.19e-09;44!UBERON:0002323;1.89e-08;45!UBERON:0000474;2.07e-08;37!UBERON:0002553;1.13e-07;52!UBERON:0002190;7.70e-07;3!UBERON:0002369;9.91e-07;3!UBERON:0001235;9.91e-07;3!UBERON:0006858;9.91e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002119;1.52e-37;4!UBERON:0000992;8.07e-32;13!UBERON:0000991;2.92e-28;21!UBERON:0001136;2.66e-18;1!UBERON:0001343;2.66e-18;1!UBERON:0004910;2.66e-18;1!UBERON:0004813;2.66e-18;1!UBERON:0004909;7.98e-10;2!UBERON:0003134;1.70e-09;33!UBERON:0003100;3.07e-09;41!UBERON:0003133;7.19e-09;44!UBERON:0002323;1.89e-08;45!UBERON:0000474;2.07e-08;37!UBERON:0002553;1.13e-07;52!UBERON:0002190;7.70e-07;3!UBERON:0002369;9.91e-07;3!UBERON:0001235;9.91e-07;3!UBERON:0006858;9.91e-07;3 | ||
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| ||
|short_description=p7@IQCG | |short_description=p7@IQCG | ||
}} | }} |
Latest revision as of 17:35, 17 September 2015
Short description: | p7@IQCG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IQCG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000478903, uc003fym.2_5end |
EntrezGene: | IQCG |
HGNC: | 25251 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.66e-18 | 1 |
seminiferous tubule epithelial cell | 2.66e-18 | 1 |
Sertoli cell | 2.66e-18 | 1 |
follicular cell of ovary | 6.23e-18 | 1 |
granulosa cell | 6.23e-18 | 1 |
steroid hormone secreting cell | 7.70e-07 | 3 |
subcutaneous fat cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
left ovary | 1.43e-37 | 4 |
female gonad | 6.67e-32 | 13 |
gonad | 2.53e-28 | 21 |
indifferent external genitalia | 2.53e-28 | 21 |
indifferent gonad | 2.53e-28 | 21 |
gonad primordium | 2.53e-28 | 21 |
external genitalia | 4.92e-27 | 22 |
mesothelium | 2.66e-18 | 1 |
seminiferous tubule of testis | 2.66e-18 | 1 |
epithelium of male gonad | 2.66e-18 | 1 |
epithelial cord | 2.66e-18 | 1 |
sex cord | 2.66e-18 | 1 |
seminiferous tubule epithelium | 2.66e-18 | 1 |
testis sex cord | 2.66e-18 | 1 |
genital ridge | 2.66e-18 | 1 |
primitive sex cord of indifferent gonad | 2.66e-18 | 1 |
coelomic epithelium | 2.66e-18 | 1 |
body cavity | 7.12e-13 | 46 |
reproductive organ | 2.49e-12 | 48 |
body cavity or lining | 4.48e-12 | 49 |
female reproductive organ | 2.71e-11 | 37 |
female reproductive system | 2.71e-11 | 37 |
body cavity precursor | 6.13e-11 | 54 |
female organism | 3.40e-10 | 41 |
reproductive structure | 5.40e-10 | 59 |
reproductive system | 5.40e-10 | 59 |
epithelium of gonad | 7.98e-10 | 2 |
anatomical cavity | 1.17e-09 | 61 |
subcutaneous adipose tissue | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.08e-19 | 14 |
reproductive organ cancer | 2.43e-14 | 29 |
female reproductive organ cancer | 3.83e-10 | 27 |