FFCP PHASE2:Hg19::chr19:3785229..3785244,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4145 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:6906 |TSSclassifier=strong ...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=6906 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q16176 | ||
|association_with_transcript=-98bp_to_S71669_5end | |association_with_transcript=-98bp_to_S71669_5end | ||
|cluster_id=chr19:3785229..3785244,- | |cluster_id=chr19:3785229..3785244,- | ||
Latest revision as of 17:57, 17 September 2015
| Short description: | p5@MATK |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_MATK_5end |
| Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
| Association with transcript: | -98bp_to_S71669_5end |
| EntrezGene: | MATK |
| HGNC: | 6906 |
| UniProt: | Q16176 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@MATK |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| monopoietic cell | 1.82e-36 | 59 |
| monocyte | 1.82e-36 | 59 |
| monoblast | 1.82e-36 | 59 |
| promonocyte | 1.82e-36 | 59 |
| macrophage dendritic cell progenitor | 3.09e-35 | 61 |
| myeloid lineage restricted progenitor cell | 1.75e-32 | 66 |
| macrophage | 2.96e-32 | 6 |
| granulocyte monocyte progenitor cell | 5.55e-32 | 67 |
| myeloid leukocyte | 1.12e-29 | 72 |
| defensive cell | 4.32e-28 | 48 |
Showing 1 to 10 of 26 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 4.78e-28 | 76 |
| bone element | 6.76e-26 | 82 |
| skeletal element | 1.81e-23 | 90 |
| immune system | 1.16e-22 | 93 |
| hematopoietic system | 1.98e-21 | 98 |
| blood island | 1.98e-21 | 98 |
| skeletal system | 5.70e-21 | 100 |
| hemolymphoid system | 2.66e-19 | 108 |
| musculoskeletal system | 7.11e-12 | 167 |
| lateral plate mesoderm | 1.94e-09 | 203 |
Showing 1 to 10 of 10 entries
