FFCP PHASE1:Hg19::chr4:40192656..40192672,+: Difference between revisions
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|id=chr4:40192656..40192672,+
|short_description=p13@RHOH
|description=CAGE_peak_13_at_RHOH_5end
|association_with_transcript=0bp_to_ENST00000505618_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=399 | |EntrezGene=399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=686 | |HGNC=686 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000505618_5end | |||
|cluster_id=chr4:40192656..40192672,+ | |||
|coexpression_cluster_id=C1225 | |||
|description=CAGE_peak_13_at_RHOH_5end | |||
|id=chr4:40192656..40192672,+ | |||
|ontology_enrichment_celltype=CL:0000084!6.08e-18!25;CL:0000827!6.08e-18!25;CL:0000542!6.87e-16!53;CL:0000051!6.87e-16!53;CL:0000838!4.06e-14!52;CL:0000791!1.43e-13!18;CL:0000789!1.43e-13!18;CL:0002420!1.43e-13!18;CL:0002419!1.43e-13!18;CL:0000790!1.43e-13!18;CL:0000625!1.67e-09!11;CL:0000738!9.26e-07!140;CL:0002087!9.34e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.16e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.31e-09,25;CL:0000827,2.31e-09,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.46e-30;2!UBERON:0005058;6.46e-30;2!UBERON:0009113;6.46e-30;2!UBERON:0004177;1.38e-12;5!UBERON:0005057;1.38e-12;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.55e-15,4;UBERON:0005058,1.55e-15,4;UBERON:0009113,1.55e-15,4;UBERON:0003295,1.55e-15,4;UBERON:0005562,1.55e-15,4;UBERON:0003351,1.12e-10,6;UBERON:0004177,2.80e-09,7;UBERON:0005057,2.80e-09,7;UBERON:0000974,9.49e-07,10;UBERON:0003408,9.49e-07,10;UBERON:0001042,9.49e-07,10;UBERON:0009145,9.49e-07,10 | |||
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| ||
|short_description=p13@RHOH | |||
}} | }} |
Latest revision as of 17:58, 17 September 2015
Short description: | p13@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RHOH_5end |
Coexpression cluster: | C1225_thymus_acute_CD4_CD8_Hodgkin_Peripheral_lymph |
Association with transcript: | 0bp_to_ENST00000505618_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.31e-09 | 25 |
pro-T cell | 2.31e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.55e-15 | 4 |
hemolymphoid system gland | 1.55e-15 | 4 |
thymic region | 1.55e-15 | 4 |
pharyngeal gland | 1.55e-15 | 4 |
thymus primordium | 1.55e-15 | 4 |
pharyngeal epithelium | 1.12e-10 | 6 |
hemopoietic organ | 2.80e-09 | 7 |
immune organ | 2.80e-09 | 7 |
neck | 9.49e-07 | 10 |
gland of gut | 9.49e-07 | 10 |
chordate pharynx | 9.49e-07 | 10 |
pharyngeal region of foregut | 9.49e-07 | 10 |