FFCP PHASE1:Hg19::chr2:56149525..56149590,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2202 | |EntrezGene=2202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3218 | |HGNC=3218 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB527786,CU676981,DQ892514,DQ895728_5end | |association_with_transcript=0bp_to_AB527786,CU676981,DQ892514,DQ895728_5end | ||
|cluster_id=chr2:56149525..56149590,- | |||
|coexpression_cluster_id=C401 | |coexpression_cluster_id=C401 | ||
|description=CAGE_peak_5_at_EFEMP1_5end | |description=CAGE_peak_5_at_EFEMP1_5end | ||
|id=chr2:56149525..56149590,- | |id=chr2:56149525..56149590,- | ||
|ontology_enrichment_celltype=CL:0000222!1.72e-17!119;CL:0002139!7.30e-17!24;CL:0000213!4.55e-14!57;CL:0000215!4.55e-14!57;CL:0000071!1.78e-12!18;CL:0002546!1.78e-12!18;CL:0002078!8.63e-12!44;CL:0000115!2.62e-11!35;CL:0000055!4.07e-11!180;CL:0000220!8.06e-11!246;CL:0002321!2.02e-10!248;CL:0000076!7.04e-10!62;CL:0000057!2.78e-09!75;CL:0002494!3.81e-07!16;CL:1000413!6.07e-07!9 | |ontology_enrichment_celltype=CL:0000222!1.72e-17!119;CL:0002139!7.30e-17!24;CL:0000213!4.55e-14!57;CL:0000215!4.55e-14!57;CL:0000071!1.78e-12!18;CL:0002546!1.78e-12!18;CL:0002078!8.63e-12!44;CL:0000115!2.62e-11!35;CL:0000055!4.07e-11!180;CL:0000220!8.06e-11!246;CL:0002321!2.02e-10!248;CL:0000076!7.04e-10!62;CL:0000057!2.78e-09!75;CL:0002494!3.81e-07!16;CL:1000413!6.07e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.15e-24;24!CL:0000071;7.11e-17;18!CL:0000115;3.12e-15;36!CL:0002078;1.29e-13;45!CL:0000213;3.54e-12;58!CL:0000215;3.54e-12;58!CL:0002138;2.84e-09;6!CL:1000413;4.05e-09;9!CL:0002494;7.06e-09;16!CL:0002544;4.65e-08;6!CL:0000153;6.22e-08;9!CL:0000447;6.22e-08;9!CL:0000136;1.82e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.18e-24,24;CL:0000213,2.09e-21,58;CL:0000215,2.09e-21,58;CL:0000222,4.26e-21,121;CL:0002078,6.69e-19,45;CL:0000115,1.86e-18,36;CL:0000071,6.53e-17,18;CL:0002546,6.53e-17,18;CL:0000057,2.83e-12,76;CL:0002321,1.64e-10,250;CL:0005020,3.20e-09,6;CL:0002138,3.20e-09,6;CL:0005022,3.20e-09,6;CL:1000413,3.54e-09,9;CL:0002494,4.83e-09,16;CL:0002544,4.25e-08,6;CL:0000153,6.27e-08,9;CL:0000447,6.27e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002546;7.11e-17;18!CL:0005022;2.84e-09;6!CL:0000222;3.16e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.55e-21!79;UBERON:0007798!1.55e-21!79;UBERON:0004872!2.67e-21!84;UBERON:0000477!5.50e-21!286;UBERON:0000055!4.55e-20!69;UBERON:0004535!5.51e-19!110;UBERON:0001009!7.02e-19!113;UBERON:0004111!3.49e-18!241;UBERON:0001981!3.61e-18!60;UBERON:0007500!3.61e-18!60;UBERON:0004537!3.61e-18!60;UBERON:0006965!3.61e-18!60;UBERON:0003914!8.35e-18!118;UBERON:0000483!4.76e-15!309;UBERON:0000025!1.87e-14!194;UBERON:0000119!2.17e-14!312;UBERON:0001637!2.66e-13!42;UBERON:0003509!2.66e-13!42;UBERON:0004572!2.66e-13!42;UBERON:0001986!1.78e-12!18;UBERON:0004638!1.78e-12!18;UBERON:0004852!1.78e-12!18;UBERON:0000490!1.68e-11!138;UBERON:0006914!4.28e-11!25;UBERON:0000475!9.73e-11!365;UBERON:0000468!3.38e-10!659;UBERON:0004573!4.96e-10!33;UBERON:0004571!4.96e-10!33;UBERON:0000487!9.02e-10!22;UBERON:0000467!5.09e-09!625;UBERON:0000480!7.07e-09!626;UBERON:0000948!1.43e-08!24;UBERON:0005498!1.43e-08!24;UBERON:0004140!1.43e-08!24;UBERON:0009881!1.43e-08!24;UBERON:0004141!1.43e-08!24;UBERON:0003084!1.43e-08!24;UBERON:0007005!1.43e-08!24;UBERON:0004139!1.43e-08!24;UBERON:0004291!1.43e-08!24;UBERON:0007100!3.63e-08!27;UBERON:0003915!6.07e-07!9;UBERON:0004700!6.07e-07!9;UBERON:0001917!6.07e-07!9 | |ontology_enrichment_uberon=UBERON:0002049!1.55e-21!79;UBERON:0007798!1.55e-21!79;UBERON:0004872!2.67e-21!84;UBERON:0000477!5.50e-21!286;UBERON:0000055!4.55e-20!69;UBERON:0004535!5.51e-19!110;UBERON:0001009!7.02e-19!113;UBERON:0004111!3.49e-18!241;UBERON:0001981!3.61e-18!60;UBERON:0007500!3.61e-18!60;UBERON:0004537!3.61e-18!60;UBERON:0006965!3.61e-18!60;UBERON:0003914!8.35e-18!118;UBERON:0000483!4.76e-15!309;UBERON:0000025!1.87e-14!194;UBERON:0000119!2.17e-14!312;UBERON:0001637!2.66e-13!42;UBERON:0003509!2.66e-13!42;UBERON:0004572!2.66e-13!42;UBERON:0001986!1.78e-12!18;UBERON:0004638!1.78e-12!18;UBERON:0004852!1.78e-12!18;UBERON:0000490!1.68e-11!138;UBERON:0006914!4.28e-11!25;UBERON:0000475!9.73e-11!365;UBERON:0000468!3.38e-10!659;UBERON:0004573!4.96e-10!33;UBERON:0004571!4.96e-10!33;UBERON:0000487!9.02e-10!22;UBERON:0000467!5.09e-09!625;UBERON:0000480!7.07e-09!626;UBERON:0000948!1.43e-08!24;UBERON:0005498!1.43e-08!24;UBERON:0004140!1.43e-08!24;UBERON:0009881!1.43e-08!24;UBERON:0004141!1.43e-08!24;UBERON:0003084!1.43e-08!24;UBERON:0007005!1.43e-08!24;UBERON:0004139!1.43e-08!24;UBERON:0004291!1.43e-08!24;UBERON:0007100!3.63e-08!27;UBERON:0003915!6.07e-07!9;UBERON:0004700!6.07e-07!9;UBERON:0001917!6.07e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.11e-17;18!UBERON:0001986;7.11e-17;18!UBERON:0004852;7.11e-17;18!UBERON:0006914;5.46e-16;25!UBERON:0000487;2.06e-14;22!UBERON:0001637;7.85e-14;42!UBERON:0003509;7.85e-14;42!UBERON:0004572;7.85e-14;42!UBERON:0000055;1.10e-13;65!UBERON:0004573;1.42e-13;33!UBERON:0004571;1.42e-13;33!UBERON:0007500;4.15e-12;56!UBERON:0001981;4.15e-12;56!UBERON:0004537;4.15e-12;56!UBERON:0002049;5.29e-11;75!UBERON:0007798;5.29e-11;75!UBERON:0000490;6.34e-11;33!UBERON:0003915;4.05e-09;9!UBERON:0004700;4.05e-09;9!UBERON:0001917;4.05e-09;9!UBERON:0004457;7.04e-09;9!UBERON:0000042;7.04e-09;9!UBERON:0004535;1.15e-08;109!UBERON:0003914;2.44e-08;74!UBERON:0000947;7.26e-08;21!UBERON:0010191;7.26e-08;21!UBERON:0000948;1.02e-07;22!UBERON:0003688;1.80e-07;6!UBERON:0002358;1.80e-07;6!UBERON:0003684;1.80e-07;6!UBERON:0001178;1.80e-07;6!UBERON:0001009;3.60e-07;112 | |||
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| ||
|short_description=p5@EFEMP1 | |short_description=p5@EFEMP1 | ||
}} | }} |
Latest revision as of 18:13, 17 September 2015
Short description: | p5@EFEMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EFEMP1_5end |
Coexpression cluster: | C401_Cardiac_pineal_occipital_globus_Hepatocyte_Osteoblast_hippocampus |
Association with transcript: | 0bp_to_AB527786, CU676981, DQ892514, DQ895728_5end |
EntrezGene: | EFEMP1 |
HGNC: | 3218 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.18e-24 | 24 |
lining cell | 2.09e-21 | 58 |
barrier cell | 2.09e-21 | 58 |
mesodermal cell | 4.26e-21 | 121 |
meso-epithelial cell | 6.69e-19 | 45 |
endothelial cell | 1.86e-18 | 36 |
blood vessel endothelial cell | 6.53e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.53e-17 | 18 |
fibroblast | 2.83e-12 | 76 |
embryonic cell | 1.64e-10 | 250 |
lymphangioblast | 3.20e-09 | 6 |
endothelial cell of lymphatic vessel | 3.20e-09 | 6 |
vascular lymphangioblast | 3.20e-09 | 6 |
endothelial cell of artery | 3.54e-09 | 9 |
cardiocyte | 4.83e-09 | 16 |
aortic endothelial cell | 4.25e-08 | 6 |
GAG secreting cell | 6.27e-08 | 9 |
carbohydrate secreting cell | 6.27e-08 | 9 |