FFCP PHASE1:Hg19::chr2:56149525..56149590,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:56149525..56149590,-
|short_description=p5@EFEMP1
|description=CAGE_peak_5_at_EFEMP1_5end
|association_with_transcript=0bp_to_AB527786,CU676981,DQ892514,DQ...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2202 | |EntrezGene=2202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3218 | |HGNC=3218 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB527786,CU676981,DQ892514,DQ895728_5end | |||
|cluster_id=chr2:56149525..56149590,- | |||
|coexpression_cluster_id=C401 | |||
|description=CAGE_peak_5_at_EFEMP1_5end | |||
|id=chr2:56149525..56149590,- | |||
|ontology_enrichment_celltype=CL:0000222!1.72e-17!119;CL:0002139!7.30e-17!24;CL:0000213!4.55e-14!57;CL:0000215!4.55e-14!57;CL:0000071!1.78e-12!18;CL:0002546!1.78e-12!18;CL:0002078!8.63e-12!44;CL:0000115!2.62e-11!35;CL:0000055!4.07e-11!180;CL:0000220!8.06e-11!246;CL:0002321!2.02e-10!248;CL:0000076!7.04e-10!62;CL:0000057!2.78e-09!75;CL:0002494!3.81e-07!16;CL:1000413!6.07e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.15e-24;24!CL:0000071;7.11e-17;18!CL:0000115;3.12e-15;36!CL:0002078;1.29e-13;45!CL:0000213;3.54e-12;58!CL:0000215;3.54e-12;58!CL:0002138;2.84e-09;6!CL:1000413;4.05e-09;9!CL:0002494;7.06e-09;16!CL:0002544;4.65e-08;6!CL:0000153;6.22e-08;9!CL:0000447;6.22e-08;9!CL:0000136;1.82e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.18e-24,24;CL:0000213,2.09e-21,58;CL:0000215,2.09e-21,58;CL:0000222,4.26e-21,121;CL:0002078,6.69e-19,45;CL:0000115,1.86e-18,36;CL:0000071,6.53e-17,18;CL:0002546,6.53e-17,18;CL:0000057,2.83e-12,76;CL:0002321,1.64e-10,250;CL:0005020,3.20e-09,6;CL:0002138,3.20e-09,6;CL:0005022,3.20e-09,6;CL:1000413,3.54e-09,9;CL:0002494,4.83e-09,16;CL:0002544,4.25e-08,6;CL:0000153,6.27e-08,9;CL:0000447,6.27e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002546;7.11e-17;18!CL:0005022;2.84e-09;6!CL:0000222;3.16e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.55e-21!79;UBERON:0007798!1.55e-21!79;UBERON:0004872!2.67e-21!84;UBERON:0000477!5.50e-21!286;UBERON:0000055!4.55e-20!69;UBERON:0004535!5.51e-19!110;UBERON:0001009!7.02e-19!113;UBERON:0004111!3.49e-18!241;UBERON:0001981!3.61e-18!60;UBERON:0007500!3.61e-18!60;UBERON:0004537!3.61e-18!60;UBERON:0006965!3.61e-18!60;UBERON:0003914!8.35e-18!118;UBERON:0000483!4.76e-15!309;UBERON:0000025!1.87e-14!194;UBERON:0000119!2.17e-14!312;UBERON:0001637!2.66e-13!42;UBERON:0003509!2.66e-13!42;UBERON:0004572!2.66e-13!42;UBERON:0001986!1.78e-12!18;UBERON:0004638!1.78e-12!18;UBERON:0004852!1.78e-12!18;UBERON:0000490!1.68e-11!138;UBERON:0006914!4.28e-11!25;UBERON:0000475!9.73e-11!365;UBERON:0000468!3.38e-10!659;UBERON:0004573!4.96e-10!33;UBERON:0004571!4.96e-10!33;UBERON:0000487!9.02e-10!22;UBERON:0000467!5.09e-09!625;UBERON:0000480!7.07e-09!626;UBERON:0000948!1.43e-08!24;UBERON:0005498!1.43e-08!24;UBERON:0004140!1.43e-08!24;UBERON:0009881!1.43e-08!24;UBERON:0004141!1.43e-08!24;UBERON:0003084!1.43e-08!24;UBERON:0007005!1.43e-08!24;UBERON:0004139!1.43e-08!24;UBERON:0004291!1.43e-08!24;UBERON:0007100!3.63e-08!27;UBERON:0003915!6.07e-07!9;UBERON:0004700!6.07e-07!9;UBERON:0001917!6.07e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.11e-17;18!UBERON:0001986;7.11e-17;18!UBERON:0004852;7.11e-17;18!UBERON:0006914;5.46e-16;25!UBERON:0000487;2.06e-14;22!UBERON:0001637;7.85e-14;42!UBERON:0003509;7.85e-14;42!UBERON:0004572;7.85e-14;42!UBERON:0000055;1.10e-13;65!UBERON:0004573;1.42e-13;33!UBERON:0004571;1.42e-13;33!UBERON:0007500;4.15e-12;56!UBERON:0001981;4.15e-12;56!UBERON:0004537;4.15e-12;56!UBERON:0002049;5.29e-11;75!UBERON:0007798;5.29e-11;75!UBERON:0000490;6.34e-11;33!UBERON:0003915;4.05e-09;9!UBERON:0004700;4.05e-09;9!UBERON:0001917;4.05e-09;9!UBERON:0004457;7.04e-09;9!UBERON:0000042;7.04e-09;9!UBERON:0004535;1.15e-08;109!UBERON:0003914;2.44e-08;74!UBERON:0000947;7.26e-08;21!UBERON:0010191;7.26e-08;21!UBERON:0000948;1.02e-07;22!UBERON:0003688;1.80e-07;6!UBERON:0002358;1.80e-07;6!UBERON:0003684;1.80e-07;6!UBERON:0001178;1.80e-07;6!UBERON:0001009;3.60e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.05e-25,68;UBERON:0002049,5.60e-24,78;UBERON:0007798,5.60e-24,78;UBERON:0004535,7.72e-24,109;UBERON:0004872,2.12e-23,83;UBERON:0001009,1.06e-22,112;UBERON:0003914,5.59e-22,117;UBERON:0007500,4.89e-21,59;UBERON:0001981,4.89e-21,59;UBERON:0004537,4.89e-21,59;UBERON:0006965,4.89e-21,59;UBERON:0004638,6.53e-17,18;UBERON:0001986,6.53e-17,18;UBERON:0004852,6.53e-17,18;UBERON:0001637,2.81e-16,42;UBERON:0003509,2.81e-16,42;UBERON:0004572,2.81e-16,42;UBERON:0006914,6.87e-16,25;UBERON:0004573,1.31e-14,33;UBERON:0004571,1.31e-14,33;UBERON:0000487,2.58e-14,22;UBERON:0004111,4.55e-10,240;UBERON:0000948,1.97e-09,24;UBERON:0005498,1.97e-09,24;UBERON:0004140,1.97e-09,24;UBERON:0009881,1.97e-09,24;UBERON:0004141,1.97e-09,24;UBERON:0003084,1.97e-09,24;UBERON:0007005,1.97e-09,24;UBERON:0004139,1.97e-09,24;UBERON:0004291,1.97e-09,24;UBERON:0000025,2.59e-09,192;UBERON:0003915,3.54e-09,9;UBERON:0004700,3.54e-09,9;UBERON:0001917,3.54e-09,9;UBERON:0000490,7.57e-09,148;UBERON:0000947,6.14e-08,21;UBERON:0010191,6.14e-08,21;UBERON:0007100,6.61e-08,27;UBERON:0003688,1.91e-07,6;UBERON:0002358,1.91e-07,6;UBERON:0003684,1.91e-07,6;UBERON:0001178,1.91e-07,6 | |||
|phase1_expression=3.63356758541113,3.8538094300377,2.96004248601539,1.0007329835313,2.68176656656373,8.72338524100369,0,0,1.04474251279935,0,0,0,0.263766978228454,0.37129905888014,0.994192127183747,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0,1.10926203050036,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,131.655707809539,1.34140171940727,1.91793842765295,5.42158728576849,10.0267582127178,13.7604193012783,2.3858578411533,7.29952305453954,0.283604451492204,0.665188192387692,1.05401742831751,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,3.57772333260069,3.4409383804245,2.08284300964557,8.47961912886015,0.838998872419812,4.67700671298115,6.89683389571475,4.13466814670926,3.20189636418039,12.0499420595281,3.22263453687318,6.0821768457481,7.56592378399325,1.47065232138347,8.91156142669936,4.01848777278359,5.16417557040191,5.29273958271614,1.53316637465883,0.949265659568129,4.03043836646896,0,0,0,5.4666914686485,4.68532893158945,0.794455084879313,17.7838704864265,4.25602058638028,7.28880880184999,0,1.48000529050296,5.29058760179603,4.04132016209064,4.41347138406339,0.908144565869588,1.72852777344,0.468642863667593,0,0,0.298897361103602,0.117434498643765,0,0,0,0,0.206651562351531,0,0.494533858557114,0,0,0,0,0,0,1.22595118319608,1.20190447125277,3.51639767796065,4.12596162084383,6.40672166455702,2.96704661623387,1.80054657650641,1.44273540933814,0,0.930584281657949,0.675105328965065,1.16924406193438,2.52433774244115,2.48534726334208,3.55621325001386,2.13005755509969,0.906768884048762,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0.842923450390509,0,0.330881918197182,0,0.237270619111097,0.539325232640658,0.588664395376038,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0,0.686271241194102,0.219500570817251,0,0.301586917234893,0.0925884451585296,0,0,1.44331342025273,0.34779121492523,1.40890433082986,6.92958949253154,8.33373922637899,9.89321591619911,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,1.71573592389777,0,0.823240336780769,0,1.06617584622764,0,0,0,0.399891964728228,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.2269149171914,1.00034104211935,0,2.28767947683888,0.892144943985809,2.20783381047509,2.34282829985426,0.601892199455438,2.27407504055985,2.0694614258501,0,0,0.781952530212746,0,0,0,0,0,0,0,0.30239029332968,2.48107807818777,3.52962538562544,5.05188169979532,2.94720043288112,4.60536524160033,4.3430558708774,1.48418066444991,0,0.355123450626254,0,0,0.116210378459959,0,1.20303882181971,0.276242966807689,0.459257792658427,0,0.131124414959424,0,0,0.784349769176855,0,0,2.27466768141793,0.680374821106063,5.39789790255348,3.08454505380579,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,1.62689197332152,0.721287081534056,0,0,0.574265537996172,0.650060246036521,0,0,0.308097234229289,0.15350367472613,0,0.859361958946189,0.870100163485371,0.170453254832202,0.178064071293475,0,1.15314040419064,0.510450849978337,0.6069466851333,1.39453664789186,2.20368642781448,0,1.23213432070436,0,0,1.11194531462352,3.2918723950658,0,0.949138274156178,7.43457756302917,0.255897791311334,1.71175595213568,0.636406495851874,2.35484592059769,0.899362287916574,1.92175920815238,1.53156123049392,0.202182481573316,1.58510321173008,1.26377536871694,0,3.1682753652067,2.11300293513511,0,0.989838023675989,1.13008116620243,1.10273068709225,3.98063385144732,7.89211593456773,0,0,0.405820753925408,0.6196469961995,1.12678241012897,0.143411352204052,0.589494246078727,0.35667105148125,0,14.5664268355388,16.4647446479951,0,0,0.769776901804097,1.34060455107157,0,1.03558180854457,0.43050537267123,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0.23874448473769,0.890894042497916,1.22864280839693,0,0,0.556543525114529,0,0,2.98871982376605,0.552567831062295,0,1.02268682502155,0,0.933118762985422,0.179736702294654,0,0,1.08507746200627,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,1.01701460117107,0,0,0,0,4.42870692906919,0.60298219312704,0,0.221158519862449,0.295547618953547,0.438770794307945,0.10893846351899,1.11538995422883,0.230850775511391,1.13942055847001,0,0,0,0.957003479195758,0,6.92945208824225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0.702793337176017,0,0,0,0.789168805698781,0,0.30607276163049,0.884612114798832,0,0,0,0,0,0,0,0,0,0.489961987071888,0.69647365264322,2.27144668714639,0,0,0.146178634172371,0.246346371159628,0.0969890164884194,0,1.80784592624426,2.60379656828827,0,0.0633107959558787,0,0.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| ||
|short_description=p5@EFEMP1 | |||
}} | }} |
Latest revision as of 18:13, 17 September 2015
Short description: | p5@EFEMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EFEMP1_5end |
Coexpression cluster: | C401_Cardiac_pineal_occipital_globus_Hepatocyte_Osteoblast_hippocampus |
Association with transcript: | 0bp_to_AB527786, CU676981, DQ892514, DQ895728_5end |
EntrezGene: | EFEMP1 |
HGNC: | 3218 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.18e-24 | 24 |
lining cell | 2.09e-21 | 58 |
barrier cell | 2.09e-21 | 58 |
mesodermal cell | 4.26e-21 | 121 |
meso-epithelial cell | 6.69e-19 | 45 |
endothelial cell | 1.86e-18 | 36 |
blood vessel endothelial cell | 6.53e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.53e-17 | 18 |
fibroblast | 2.83e-12 | 76 |
embryonic cell | 1.64e-10 | 250 |
lymphangioblast | 3.20e-09 | 6 |
endothelial cell of lymphatic vessel | 3.20e-09 | 6 |
vascular lymphangioblast | 3.20e-09 | 6 |
endothelial cell of artery | 3.54e-09 | 9 |
cardiocyte | 4.83e-09 | 16 |
aortic endothelial cell | 4.25e-08 | 6 |
GAG secreting cell | 6.27e-08 | 9 |
carbohydrate secreting cell | 6.27e-08 | 9 |