FFCP PHASE2:Hg19::chr7:22259789..22259809,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9771 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16862 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9771 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16862 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JHM4 | ||
|association_with_transcript=47bp_to_ENST00000420196_5end | |association_with_transcript=47bp_to_ENST00000420196_5end | ||
|cluster_id=chr7:22259789..22259809,- | |cluster_id=chr7:22259789..22259809,- | ||
Latest revision as of 18:40, 17 September 2015
| Short description: | p7@RAPGEF5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_RAPGEF5_5end |
| Coexpression cluster: | C1887_lung_Endothelial_adipose_heart_spleen_Hepatocyte_penis |
| Association with transcript: | 47bp_to_ENST00000420196_5end |
| EntrezGene: | RAPGEF5 |
| HGNC: | 16862 |
| UniProt: | C9JHM4 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@RAPGEF5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell of vascular tree | 1.51e-24 | 24 |
| endothelial cell | 3.07e-24 | 36 |
| meso-epithelial cell | 1.44e-17 | 45 |
| blood vessel endothelial cell | 7.09e-17 | 18 |
| embryonic blood vessel endothelial progenitor cell | 7.09e-17 | 18 |
| lining cell | 1.01e-11 | 58 |
| barrier cell | 1.01e-11 | 58 |
| endothelial cell of artery | 5.24e-11 | 9 |
| lymphangioblast | 1.88e-09 | 6 |
| endothelial cell of lymphatic vessel | 1.88e-09 | 6 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 3.17e-47 | 114 |
| anatomical conduit | 1.01e-25 | 240 |
| tube | 9.91e-22 | 192 |
| blood vessel endothelium | 7.09e-17 | 18 |
| endothelium | 7.09e-17 | 18 |
| cardiovascular system endothelium | 7.09e-17 | 18 |
| vessel | 3.93e-15 | 68 |
| splanchnic layer of lateral plate mesoderm | 2.26e-13 | 83 |
| simple squamous epithelium | 6.15e-13 | 22 |
| epithelial tube | 2.73e-12 | 117 |
Showing 1 to 10 of 45 entries
