FFCP PHASE1:Hg19::chr16:72090064..72090086,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3240 | |EntrezGene=3240 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5141 | |HGNC=5141 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_uc002fbu.1,uc002fbv.3,uc002fbw.3_5end | |association_with_transcript=4bp_to_uc002fbu.1,uc002fbv.3,uc002fbw.3_5end | ||
|cluster_id=chr16:72090064..72090086,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_HP_5end | |description=CAGE_peak_1_at_HP_5end | ||
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|ontology_enrichment_celltype=CL:0000181!1.11e-18!12;CL:0000417!1.11e-18!12;CL:0000668!1.11e-18!12;CL:0000414!1.11e-18!12;CL:0000412!1.11e-18!12;CL:0000182!1.11e-18!12;CL:0000136!2.43e-10!15;CL:0002615!1.46e-09!3 | |ontology_enrichment_celltype=CL:0000181!1.11e-18!12;CL:0000417!1.11e-18!12;CL:0000668!1.11e-18!12;CL:0000414!1.11e-18!12;CL:0000412!1.11e-18!12;CL:0000182!1.11e-18!12;CL:0000136!2.43e-10!15;CL:0002615!1.46e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.26e-19;12!CL:0002615;1.81e-09;3 | |ontology_enrichment_celltype_v019=CL:0000182;2.26e-19;12!CL:0002615;1.81e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.26e-19,12;CL:0002615,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.62e-10;11!UBERON:0009497;1.17e-08;13 | |ontology_enrichment_development_v019=UBERON:0004161;4.62e-10;11!UBERON:0009497;1.17e-08;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;6.62e-33;19!UBERON:0006925;6.62e-33;19!UBERON:0002423;4.07e-25;25!UBERON:0002365;2.82e-20;31!UBERON:0002330;2.82e-20;31!UBERON:0002368;1.58e-17;33!UBERON:0000949;9.76e-13;43!UBERON:0005172;3.27e-09;52!UBERON:0005173;3.27e-09;52!UBERON:0002417;2.19e-07;58!UBERON:0000916;2.19e-07;58!UBERON:0002530;9.53e-07;57 | |ontology_enrichment_uberon_v019=UBERON:0002107;6.62e-33;19!UBERON:0006925;6.62e-33;19!UBERON:0002423;4.07e-25;25!UBERON:0002365;2.82e-20;31!UBERON:0002330;2.82e-20;31!UBERON:0002368;1.58e-17;33!UBERON:0000949;9.76e-13;43!UBERON:0005172;3.27e-09;52!UBERON:0005173;3.27e-09;52!UBERON:0002417;2.19e-07;58!UBERON:0000916;2.19e-07;58!UBERON:0002530;9.53e-07;57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.62e-33,19;UBERON:0006925,6.62e-33,19;UBERON:0008836,6.62e-33,19;UBERON:0008835,1.76e-28,22;UBERON:0003894,1.76e-28,22;UBERON:0009854,2.91e-27,23;UBERON:0007499,4.07e-25,25;UBERON:0009497,4.07e-25,25;UBERON:0000015,4.07e-25,25;UBERON:0002423,4.07e-25,25;UBERON:0006235,4.07e-25,25;UBERON:0004161,4.07e-25,25;UBERON:0009856,3.63e-24,26;UBERON:0002365,2.48e-20,31;UBERON:0002330,2.48e-20,31;UBERON:0002368,4.75e-18,35;UBERON:0002417,5.11e-15,60;UBERON:0000916,5.11e-15,60;UBERON:0000949,4.14e-14,45;UBERON:0003929,8.40e-12,54;UBERON:0005172,8.40e-12,54;UBERON:0005173,8.40e-12,54;UBERON:0002530,8.02e-11,59;UBERON:0009569,4.44e-08,112;UBERON:0005911,7.71e-08,82;UBERON:0001041,2.13e-07,87 | |||
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|short_description=p1@HP | |short_description=p1@HP | ||
}} | }} |
Latest revision as of 18:43, 17 September 2015
Short description: | p1@HP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HP_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 4bp_to_uc002fbu.1, uc002fbv.3, uc002fbw.3_5end |
EntrezGene: | HP |
HGNC: | 5141 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.26e-19 | 12 |
adipocyte of omentum tissue | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 6.62e-33 | 19 |
digestive gland | 6.62e-33 | 19 |
liver bud | 6.62e-33 | 19 |
hepatic diverticulum | 1.76e-28 | 22 |
liver primordium | 1.76e-28 | 22 |
digestive tract diverticulum | 2.91e-27 | 23 |
epithelial sac | 4.07e-25 | 25 |
epithelium of foregut-midgut junction | 4.07e-25 | 25 |
anatomical boundary | 4.07e-25 | 25 |
hepatobiliary system | 4.07e-25 | 25 |
foregut-midgut junction | 4.07e-25 | 25 |
septum transversum | 4.07e-25 | 25 |
sac | 3.63e-24 | 26 |
exocrine gland | 2.48e-20 | 31 |
exocrine system | 2.48e-20 | 31 |
endocrine gland | 4.75e-18 | 35 |
abdominal segment of trunk | 5.11e-15 | 60 |
abdomen | 5.11e-15 | 60 |
endocrine system | 4.14e-14 | 45 |
gut epithelium | 8.40e-12 | 54 |
abdomen element | 8.40e-12 | 54 |
abdominal segment element | 8.40e-12 | 54 |
gland | 8.02e-11 | 59 |
subdivision of trunk | 4.44e-08 | 112 |
endo-epithelium | 7.71e-08 | 82 |
foregut | 2.13e-07 | 87 |