FFCP PHASE1:Hg19::chr21:16374660..16374679,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8204 | |EntrezGene=8204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8001 | |HGNC=8001 | ||
|TSSclassifier=strong | |||
|UniProt=C9J130 | |UniProt=C9J130 | ||
|association_with_transcript=9bp_to_ENST00000411932_5end | |||
|cluster_id=chr21:16374660..16374679,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_NRIP1_5end | |||
|id=chr21:16374660..16374679,- | |||
|ontology_enrichment_celltype=CL:0000064!3.77e-14!3;CL:0005012!3.77e-14!3;CL:0000067!3.77e-14!3;CL:0002304!3.77e-14!3;CL:0000306!1.79e-10!4;CL:0002222!1.79e-10!4;CL:0002224!1.79e-10!4;CL:0000075!4.93e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000342;6.31e-21;1!CL:0002565;6.31e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,4.22e-21,1;CL:0002565,4.22e-21,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.73e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1115;1.55e-09;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,1.62e-09,20 | |||
|ontology_enrichment_uberon=UBERON:0007625!7.36e-25!11;UBERON:0000970!1.03e-20!20;UBERON:0002104!1.24e-19!21;UBERON:0000488!1.82e-18!4;UBERON:0000020!9.50e-18!23;UBERON:0000019!1.31e-17!19;UBERON:0000047!1.31e-17!19;UBERON:0004088!1.31e-17!19;UBERON:0003072!1.31e-17!19;UBERON:0003071!1.31e-17!19;UBERON:0004128!1.31e-17!19;UBERON:0001032!6.33e-17!24;UBERON:0004456!6.33e-17!24;UBERON:0001456!8.98e-16!21;UBERON:0001801!9.15e-15!14;UBERON:0001778!3.77e-14!3;UBERON:0001775!3.77e-14!3;UBERON:0003056!1.22e-12!61;UBERON:0002203!2.43e-12!6;UBERON:0001768!2.43e-12!6;UBERON:0003075!4.66e-12!86;UBERON:0007284!4.66e-12!86;UBERON:0002346!2.40e-11!90;UBERON:0003296!5.16e-11!4;UBERON:0010133!5.16e-11!4;UBERON:0005085!5.82e-11!29;UBERON:0001905!1.53e-10!2;UBERON:0002757!1.53e-10!2;UBERON:0010134!1.53e-10!2;UBERON:0002784!1.53e-10!2;UBERON:0005408!1.53e-10!2;UBERON:0001899!1.53e-10!2;UBERON:0010077!1.79e-10!4;UBERON:0005389!1.79e-10!4;UBERON:0000484!1.79e-10!4;UBERON:0002546!1.79e-10!4;UBERON:0000965!1.79e-10!4;UBERON:0001803!1.79e-10!4;UBERON:0003073!1.79e-10!4;UBERON:0005426!1.79e-10!4;UBERON:0000033!4.16e-08!123;UBERON:0000153!1.51e-07!129;UBERON:0007811!1.51e-07!129;UBERON:0001444!2.29e-07!48;UBERON:0002200!9.71e-07!11;UBERON:0006876!9.71e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.89e-41;2!UBERON:0002757;4.89e-41;2!UBERON:0010134;4.89e-41;2!UBERON:0005408;4.89e-41;2!UBERON:0001899;4.89e-41;2!UBERON:0003296;4.23e-21;4!UBERON:0010133;4.23e-21;4!UBERON:0002784;4.23e-21;4!UBERON:0002506;6.31e-21;1!UBERON:0001769;6.31e-21;1!UBERON:0000970;3.08e-16;20!UBERON:0002104;1.74e-15;21!UBERON:0000020;3.55e-14;23!UBERON:0001032;1.33e-13;24!UBERON:0004456;1.33e-13;24!UBERON:0001894;1.68e-12;7!UBERON:0000019;5.26e-10;19!UBERON:0000047;5.26e-10;19!UBERON:0004088;5.26e-10;19!UBERON:0010230;5.26e-10;19!UBERON:0001456;4.13e-09;21!UBERON:0007625;4.18e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.89e-41,2;UBERON:0002757,4.89e-41,2;UBERON:0010134,4.89e-41,2;UBERON:0005408,4.89e-41,2;UBERON:0001899,4.89e-41,2;UBERON:0002506,4.22e-21,1;UBERON:0001769,4.22e-21,1;UBERON:0003296,4.23e-21,4;UBERON:0010133,4.23e-21,4;UBERON:0002784,4.23e-21,4;UBERON:0000970,1.58e-15,21;UBERON:0002104,1.58e-15,21;UBERON:0000020,1.23e-13,24;UBERON:0001032,1.23e-13,24;UBERON:0004456,1.23e-13,24;UBERON:0001894,1.68e-12,7;UBERON:0006222,1.68e-12,7;UBERON:0000019,1.44e-09,20;UBERON:0000047,1.44e-09,20;UBERON:0010312,1.44e-09,20;UBERON:0004088,1.44e-09,20;UBERON:0010230,1.44e-09,20;UBERON:0003072,1.44e-09,20;UBERON:0004128,1.44e-09,20;UBERON:0003071,1.44e-09,20;UBERON:0001456,9.43e-09,22;UBERON:0003056,3.66e-08,61;UBERON:0007625,3.90e-08,11 | |||
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| ||
|short_description=p4@NRIP1 | |||
}} | }} |
Latest revision as of 18:56, 17 September 2015
Short description: | p4@NRIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NRIP1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 9bp_to_ENST00000411932_5end |
EntrezGene: | NRIP1 |
HGNC: | 8001 |
UniProt: | C9J130 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 4.22e-21 | 1 |
iris pigment epithelial cell | 4.22e-21 | 1 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.89e-41 | 2 |
regional part of epithalamus | 4.89e-41 | 2 |
secretory circumventricular organ | 4.89e-41 | 2 |
circumventricular organ | 4.89e-41 | 2 |
epithalamus | 4.89e-41 | 2 |
iris epithelium | 4.22e-21 | 1 |
iris | 4.22e-21 | 1 |
gland of diencephalon | 4.23e-21 | 4 |
neuroendocrine gland | 4.23e-21 | 4 |
regional part of diencephalon | 4.23e-21 | 4 |
eye | 1.58e-15 | 21 |
visual system | 1.58e-15 | 21 |
sense organ | 1.23e-13 | 24 |
sensory system | 1.23e-13 | 24 |
entire sense organ system | 1.23e-13 | 24 |
diencephalon | 1.68e-12 | 7 |
future diencephalon | 1.68e-12 | 7 |
camera-type eye | 1.44e-09 | 20 |
simple eye | 1.44e-09 | 20 |
immature eye | 1.44e-09 | 20 |
ocular region | 1.44e-09 | 20 |
eyeball of camera-type eye | 1.44e-09 | 20 |
optic cup | 1.44e-09 | 20 |
optic vesicle | 1.44e-09 | 20 |
eye primordium | 1.44e-09 | 20 |
face | 9.43e-09 | 22 |
pre-chordal neural plate | 3.66e-08 | 61 |
pigment epithelium of eye | 3.90e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 1.62e-09 | 20 |