FFCP PHASE1:Hg19::chr4:40752184..40752240,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79730 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25857 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=203bp_to_ENST00000473399_5end | |||
|cluster_id=chr4:40752184..40752240,+ | |||
|coexpression_cluster_id=C4412 | |||
|description=CAGE_peak_2_at_NSUN7_5end | |||
|id=chr4:40752184..40752240,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.96e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.34e-09;5!CL:0000039;3.74e-08;7!CL:0000586;3.74e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.30e-12,253;CL:0002322,3.65e-09,5;CL:0000039,4.64e-08,7;CL:0000586,4.64e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.39e-08;10!UBERON:0005564;7.39e-08;10 | |||
|ontology_enrichment_disease=DOID:305!7.25e-13!106;DOID:0050687!1.88e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.35e-10;22!DOID:2994;3.35e-10;22!DOID:305;9.05e-09;106 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.84e-21,143;DOID:305,4.30e-20,106;DOID:3095,2.66e-10,22;DOID:2994,2.66e-10,22;DOID:162,2.47e-09,235;DOID:14566,8.36e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0000064!1.80e-09!219;UBERON:0007023!3.08e-08!115;UBERON:0000464!5.68e-08!104;UBERON:0000062!1.35e-07!511;UBERON:0003075!2.55e-07!86;UBERON:0007284!2.55e-07!86;UBERON:0004121!2.86e-07!169;UBERON:0004119!3.62e-07!169;UBERON:0000925!3.62e-07!169;UBERON:0006595!3.62e-07!169;UBERON:0000922!3.78e-07!612;UBERON:0000063!3.92e-07!97;UBERON:0003135!8.02e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.28e-09;8!UBERON:0000160;1.58e-09;17!UBERON:0003135;3.03e-08;11!UBERON:0005409;4.31e-08;22!UBERON:0000059;7.08e-08;11!UBERON:0004907;7.63e-08;5!UBERON:0000922;4.16e-07;49!UBERON:0001052;5.34e-07;4!UBERON:0007625;9.85e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.28e-09,8;UBERON:0000160,1.74e-09,17;UBERON:0003135,3.60e-08,11;UBERON:0000059,7.85e-08,11;UBERON:0004907,1.10e-07,5;UBERON:0007625,5.41e-07,11;UBERON:0001052,5.53e-07,4;UBERON:0005409,9.25e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,1.72369481307503,0.612002073732759,0.626909442956176,5.15224776835902,3.96935832711364,5.90050406095573,0,0,0,0,0,0,0,0,0,0,0,1.46800219667424,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0.28769239232215,0.512321413058201,0.47296445977717,0,0,0,0,0.272906150057846,0,0,0,0,0,0.797854630486527,0,0,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,2.64342657158052,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,2.9305793320861,1.99556457716308,2.19586964232815,4.1913304159268,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535798369704479,0.22452937262617,0.450445921933289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.70296429550139,0,0,0,0,0.485618833104395,0,0,0.368502951935304,0,0,0.741800787835671,0,0,0.336672227908132,0.375355559615893,0,0.877955241761676,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0.272746120590835,0,10.6117124332748,10.0722623924329,7.20402445791014,4.45742536566093,9.08355063152262,8.02950189966826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21379189377604,0.514703430895577,0.109750285408626,0,0.100528972411631,0.555530670951178,0.651616610620649,0,0,1.39116485970092,0.70445216541493,0,0,0,3.1608175918371,2.57545848628462,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0.207328115540772,0,0,0,0.381988425558278,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0.502548796003046,0,0,5.9832291840805,1.24324654030811,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0.213455115606889,0,3.32870879020994,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0.0920809889358963,0,0,0,1.80479845162965,1.30926073077505,3.13739907670742,2.92278449306521,1.16106791782163,1.13733384070897,0.510281115829547,0,0,0.541892875087706,0,1.78413391131527,0,1.56712328305525,0,0,3.33385162651306,1.64007322849853,1.95227036798582,0.412164046590889,0.27470839445503,0.247528499761764,0,0,0,0.193341436584244,0,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0.573645408816206,0,0,0,0,0,0.379473173765715,0.349934720244983,0.192444225451024,0,1.08890984861323,0.376575203107117,0,1.68471475667626,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0.213648142254946,0,3.67560323971548,0,0.432807638929335,0.284567373393656,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0.281338832821026,0.111308705022906,0,2.74463030566391,1.79323189425963,1.10513566212459,7.306049687774,0.102268682502155,0.123084805461069,0,2.42644548097782,0.179021174675609,0,0.591860433821602,2.3948309234694,0,0,0,0,3.1251331330228,1.92411999991631,0,2.61724931056649,6.86484855790469,3.30942754475111,0,0,3.47249989866585,1.77148277162768,0.482385754501632,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0.41827123283581,0.461701551022782,0,0,1.43612231055635,10.4301477045128,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,2.28525931422807,5.08871057162187,2.16388639742091,3.98104772431402,1.59223616106011,9.16545217400438,0,0,0,0.337005664903385,0,0,0.182454789215666,2.54364004611717,0,1.18375320854817,3.62972148145992,0.91821828489147,0.126373159256976,0,0,0,0,0,0,2.84609546029793,0,0.520679215005393,0.587954384486266,0,0.698906672968121,2.0638323896594,0,0,0,0.290967049465258,0,0.90392296312213,0,0.19871461170299,0.0633107959558787,4.88878456837007,0,0.640358984218058,0.799238438328521,2.4495370916198,0,1.20116498503375,0.576219191952599,0.869767748958028,0,0.135904206073614,0.313808538937,0,0,0,0,6.38732940334862,0,0,0.558564802544508,0.916641696046735,0,1.79711100449092,0,0.446342914883745,1.2764859772478,0,1.16495949527454,0,0,0,0,0,0,0.136203406111576,12.6994987287365,14.716719715904,9.55512777467126,0.2249738915515,0,0.121499113316049,0,1.57611414598396,2.15063811353492,0.739202355635845,0,4.60596473566669,2.1440859791201,0.662091970365432,0,0,0,0,2.39460383124975,0.082092520749339,0,2.15292973888239,0,0,0.517131825446202,0.13223260174269,0,4.9337051562167,1.06787412567695,1.10043013569766,1.65695622138878,0.992332043623902,0,0,1.91502377331055,0,0,0,0,0.785270481251171,0,0,0,1.14681839138014,0,0.248385611765534,1.52183498429854,0,0,0,0,1.87333962322753,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0.44980311216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| |||
|short_description=p2@NSUN7 | |||
}} |
Latest revision as of 19:00, 17 September 2015
Short description: | p2@NSUN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NSUN7_5end |
Coexpression cluster: | C4412_argyrophil_rectum_testis_testicular_iPS_choriocarcinoma_small |
Association with transcript: | 203bp_to_ENST00000473399_5end |
EntrezGene: | NSUN7 |
HGNC: | 25857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.30e-12 | 253 |
embryonic stem cell | 3.65e-09 | 5 |
germ line cell | 4.64e-08 | 7 |
germ cell | 4.64e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.28e-09 | 8 |
intestine | 1.74e-09 | 17 |
male reproductive organ | 3.60e-08 | 11 |
large intestine | 7.85e-08 | 11 |
lower digestive tract | 1.10e-07 | 5 |
pigment epithelium of eye | 5.41e-07 | 11 |
rectum | 5.53e-07 | 4 |
gastrointestinal system | 9.25e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.84e-21 | 143 |
carcinoma | 4.30e-20 | 106 |
germ cell and embryonal cancer | 2.66e-10 | 22 |
germ cell cancer | 2.66e-10 | 22 |
cancer | 2.47e-09 | 235 |
disease of cellular proliferation | 8.36e-09 | 239 |