FFCP PHASE1:Hg19::chr1:157670333..157670347,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115352 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18506 | |||
|TSSclassifier=strong | |||
|UniProt=Q96P31 | |||
|association_with_transcript=27bp_to_AY043466_5end | |||
|cluster_id=chr1:157670333..157670347,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_7_at_FCRL3_5end | |||
|id=chr1:157670333..157670347,- | |||
|ontology_enrichment_celltype=CL:0000542!1.45e-44!53;CL:0000051!1.45e-44!53;CL:0000838!1.85e-42!52;CL:0000236!1.86e-31!14;CL:0000945!3.89e-30!24;CL:0000826!3.89e-30!24;CL:0002087!2.14e-23!119;CL:0000738!8.37e-20!140;CL:0002031!1.44e-16!124;CL:0000791!8.96e-15!18;CL:0000789!8.96e-15!18;CL:0002420!8.96e-15!18;CL:0002419!8.96e-15!18;CL:0000790!8.96e-15!18;CL:0000037!2.18e-14!172;CL:0000566!2.18e-14!172;CL:0000988!4.27e-13!182;CL:0000625!1.62e-12!11;CL:0002032!2.66e-12!165;CL:0000837!2.66e-12!165;CL:0000084!4.72e-10!25;CL:0000827!4.72e-10!25;CL:0000898!9.70e-10!3;CL:0000623!1.81e-09!3;CL:0000825!1.81e-09!3;CL:0000842!2.29e-09!3;CL:0000815!3.04e-07!2;CL:0000792!3.04e-07!2;CL:0002677!3.04e-07!2;CL:0000224!4.02e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.53e-64;13!CL:0000945;1.97e-40;24!CL:0000542;1.71e-19;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,9.80e-60,14;CL:0000945,2.04e-40,24;CL:0000826,2.04e-40,24;CL:0000838,1.60e-27,52;CL:0000542,6.02e-27,53;CL:0000051,6.02e-27,53;CL:0002087,1.01e-10,115;CL:0002031,3.70e-10,120;CL:0000738,1.24e-08,136;CL:0002032,7.33e-07,161;CL:0000837,7.33e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;1.71e-19;53!UBERON:0001045;4.56e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.47e-15!15;UBERON:0000179!6.47e-15!15;UBERON:0000463!6.47e-15!15;UBERON:0004177!9.29e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.11e-11;15!UBERON:0000179;3.11e-11;15!UBERON:0000463;3.11e-11;15!UBERON:0002372;4.56e-08;1!UBERON:0001154;4.56e-08;1!UBERON:0001153;4.56e-08;1!UBERON:0009854;4.56e-08;1!UBERON:0001961;4.56e-08;1!UBERON:0001744;4.56e-08;1!UBERON:0001042;4.56e-08;1!UBERON:0001735;4.56e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.92e-11,15;UBERON:0000179,3.92e-11,15;UBERON:0000463,3.92e-11,15;UBERON:0002372,3.57e-08,1;UBERON:0001961,3.57e-08,1;UBERON:0001744,3.57e-08,1;UBERON:0001735,3.57e-08,1;UBERON:0001154,6.24e-08,1;UBERON:0001153,6.24e-08,1;UBERON:0001045,6.24e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0,0,0,0,0,0.92960640696362,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,12.0150494477669,12.4531295540898,5.12076267079809,6.00593980554019,7.47178171940828,9.91567309177293,13.3567525634951,3.98449078376614,1.17447437874188,3.05818582500183,0,0,0,0,0,0,0.668745981562712,0.977766799900771,3.78758244587787,3.89653456815823,0.334231370655521,1.47302953737419,1.99380505125259,2.16643091012012,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0.759059076058509,0.95569624297229,1.30216690771284,0,0,0.76791966692651,0,0.947109008176067,1.64225599384209,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.646882724578552,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,1.13929437434833,1.19115887728894,2.05681136543097,0.648473311192717,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,1.33971858218986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,1.97366227757693,0.193373663920732,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,1.6164492723501,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.00636896795513,0 | |||
|short_description=p7@FCRL3 | |||
}} |
Latest revision as of 19:23, 17 September 2015
Short description: | p7@FCRL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FCRL3_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 27bp_to_AY043466_5end |
EntrezGene: | FCRL3 |
HGNC: | 18506 |
UniProt: | Q96P31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 9.80e-60 | 14 |
lymphocyte of B lineage | 2.04e-40 | 24 |
pro-B cell | 2.04e-40 | 24 |
lymphoid lineage restricted progenitor cell | 1.60e-27 | 52 |
lymphocyte | 6.02e-27 | 53 |
common lymphoid progenitor | 6.02e-27 | 53 |
nongranular leukocyte | 1.01e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.70e-10 | 120 |
leukocyte | 1.24e-08 | 136 |
hematopoietic oligopotent progenitor cell | 7.33e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.33e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 3.92e-11 | 15 |
haemolymphatic fluid | 3.92e-11 | 15 |
organism substance | 3.92e-11 | 15 |
tonsil | 3.57e-08 | 1 |
mucosa-associated lymphoid tissue | 3.57e-08 | 1 |
lymphoid tissue | 3.57e-08 | 1 |
tonsillar ring | 3.57e-08 | 1 |
vermiform appendix | 6.24e-08 | 1 |
caecum | 6.24e-08 | 1 |
midgut | 6.24e-08 | 1 |