FFCP PHASE1:Hg19::chr1:3607219..3607226,+: Difference between revisions
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|id=chr1:3607219..3607226,+
|short_description=p16@TP73
|description=CAGE_peak_16_at_TP73_5end
|association_with_transcript=-9bp_to_ENST00000378280,ENST00000378285,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7161 | |EntrezGene=7161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12003 | |HGNC=12003 | ||
|TSSclassifier=strong | |||
|UniProt=O15350 | |UniProt=O15350 | ||
|association_with_transcript=-9bp_to_ENST00000378280,ENST00000378285,ENST00000378288,NM_001126240,NM_001126241,NM_001126242,NM_001204189,NM_001204190,NM_001204191,uc001akr.2,uc001aks.2,uc009vlk.1,uc010nzj.1_5end | |||
|cluster_id=chr1:3607219..3607226,+ | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_16_at_TP73_5end | |||
|id=chr1:3607219..3607226,+ | |||
|ontology_enrichment_celltype=CL:0000575!4.42e-13!2;CL:0000240!2.29e-09!6;CL:0000311!2.29e-09!6;CL:0000079!2.29e-09!6;CL:0000237!2.29e-09!6;CL:0000036!2.29e-09!6;CL:0000357!2.29e-09!6;CL:0000114!2.29e-09!6;CL:0000076!2.91e-09!62;CL:0002159!1.79e-07!13;CL:0002336!3.20e-07!1;CL:0002261!3.20e-07!1;CL:0002170!3.20e-07!1;CL:0000313!6.49e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.32e-26;2!CL:0000242;4.32e-26;2!CL:0002623;9.45e-18;3!CL:0000312;2.66e-11;5!CL:0000622;3.26e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000154;1.44e-09;6!CL:0000362;7.48e-07;9!CL:0000150;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.32e-26,2;CL:0002623,1.12e-17,3;CL:0000312,2.66e-11,5;CL:0000622,3.60e-11,5;CL:0000240,1.22e-09,6;CL:0000311,1.22e-09,6;CL:0000079,1.22e-09,6;CL:0000237,1.22e-09,6;CL:0000036,1.22e-09,6;CL:0000357,1.22e-09,6;CL:0000114,1.22e-09,6;CL:0000154,1.57e-09,6;CL:0000362,7.48e-07,9;CL:0000150,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!2.91e-14!14;DOID:2152!6.49e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003729!7.54e-11!5;UBERON:0000924!6.29e-09!173;UBERON:0006601!6.29e-09!173;UBERON:0001896!2.03e-08!3;UBERON:0005290!2.03e-08!3;UBERON:0010096!2.03e-08!3;UBERON:0004121!4.20e-08!169;UBERON:0000998!2.23e-07!1;UBERON:0006868!2.23e-07!1;UBERON:0000964!5.96e-07!4;UBERON:0004348!5.96e-07!4;UBERON:0005427!5.96e-07!4;UBERON:0004911!6.49e-07!1;UBERON:0000153!8.13e-07!129;UBERON:0007811!8.13e-07!129;UBERON:0000997!8.67e-07!1;UBERON:0005056!8.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.13e-13;4!UBERON:0000923;1.13e-13;4!UBERON:0010316;1.13e-13;4!UBERON:0005291;1.13e-13;4!UBERON:0002050;3.26e-11;5!UBERON:0005423;3.26e-11;5!UBERON:0001044;1.44e-09;6!UBERON:0003293;1.44e-09;6!UBERON:0003294;1.44e-09;6!UBERON:0010047;1.44e-09;6!UBERON:0003408;1.44e-09;6!UBERON:0000167;1.44e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.57e-09,6;UBERON:0003293,1.57e-09,6;UBERON:0003294,1.57e-09,6;UBERON:0010047,1.57e-09,6;UBERON:0000167,1.57e-09,6 | |||
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|short_description=p16@TP73 | |||
}} | }} |
Latest revision as of 19:31, 17 September 2015
Short description: | p16@TP73 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TP73_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | -9bp_to_ENST00000378280, ENST00000378285, ENST00000378288, NM_001126240, NM_001126241, NM_001126242, NM_001204189, NM_001204190, NM_001204191, uc001akr.2, uc001aks.2, uc009vlk.1, uc010nzj.1_5end |
EntrezGene: | TP73 |
HGNC: | 12003 |
UniProt: | O15350 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.32e-26 | 2 |
acinar cell of salivary gland | 1.12e-17 | 3 |
keratinocyte | 2.66e-11 | 5 |
acinar cell | 3.60e-11 | 5 |
stratified squamous epithelial cell | 1.22e-09 | 6 |
keratin accumulating cell | 1.22e-09 | 6 |
stratified epithelial cell | 1.22e-09 | 6 |
keratinizing barrier epithelial cell | 1.22e-09 | 6 |
epithelial fate stem cell | 1.22e-09 | 6 |
stratified epithelial stem cell | 1.22e-09 | 6 |
surface ectodermal cell | 1.22e-09 | 6 |
protein secreting cell | 1.57e-09 | 6 |
epidermal cell | 7.48e-07 | 9 |
glandular epithelial cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.57e-09 | 6 |
gland of oral region | 1.57e-09 | 6 |
gland of foregut | 1.57e-09 | 6 |
oral gland | 1.57e-09 | 6 |
oral cavity | 1.57e-09 | 6 |