FFCP PHASE1:Hg19::chr21:17566774..17566788,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |HGNC=1274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000445461_5end | |association_with_transcript=0bp_to_ENST00000445461_5end | ||
|cluster_id=chr21:17566774..17566788,+ | |||
|coexpression_cluster_id=C4067 | |||
|description=CAGE_peak_16_at_LINC00478_5end | |description=CAGE_peak_16_at_LINC00478_5end | ||
|id=chr21:17566774..17566788,+ | |id=chr21:17566774..17566788,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.63e-11;3!CL:0000840;2.29e-09;5!CL:0002319;2.64e-08;25!CL:0000128;4.03e-08;7!CL:0000126;4.03e-08;7!CL:0000127;4.03e-08;7!CL:0000047;3.57e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.90e-11,3;CL:0000840,1.43e-09,5;CL:0001029,1.43e-09,5;CL:0000128,3.09e-08,7;CL:0000126,3.09e-08,7;CL:0000127,3.09e-08,7;CL:0002453,3.09e-08,7;CL:0002319,3.17e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.57e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.53e-11!86;UBERON:0001017!2.50e-11!82;UBERON:0003075!9.91e-11!86;UBERON:0007284!9.91e-11!86;UBERON:0001049!1.59e-10!57;UBERON:0005068!1.59e-10!57;UBERON:0006241!1.59e-10!57;UBERON:0007135!1.59e-10!57;UBERON:0002346!3.00e-10!90;UBERON:0000153!1.97e-09!129;UBERON:0007811!1.97e-09!129;UBERON:0000073!2.11e-09!94;UBERON:0001016!2.11e-09!94;UBERON:0002616!5.79e-09!59;UBERON:0000033!1.46e-08!123;UBERON:0000955!3.39e-08!69;UBERON:0006238!3.39e-08!69;UBERON:0001737!4.33e-08!9;UBERON:0003056!4.75e-08!61;UBERON:0002780!6.07e-08!41;UBERON:0001890!6.07e-08!41;UBERON:0006240!6.07e-08!41;UBERON:0007023!7.54e-08!115;UBERON:0003080!1.48e-07!42;UBERON:0000479!9.71e-07!787 | |ontology_enrichment_uberon=UBERON:0005743!1.53e-11!86;UBERON:0001017!2.50e-11!82;UBERON:0003075!9.91e-11!86;UBERON:0007284!9.91e-11!86;UBERON:0001049!1.59e-10!57;UBERON:0005068!1.59e-10!57;UBERON:0006241!1.59e-10!57;UBERON:0007135!1.59e-10!57;UBERON:0002346!3.00e-10!90;UBERON:0000153!1.97e-09!129;UBERON:0007811!1.97e-09!129;UBERON:0000073!2.11e-09!94;UBERON:0001016!2.11e-09!94;UBERON:0002616!5.79e-09!59;UBERON:0000033!1.46e-08!123;UBERON:0000955!3.39e-08!69;UBERON:0006238!3.39e-08!69;UBERON:0001737!4.33e-08!9;UBERON:0003056!4.75e-08!61;UBERON:0002780!6.07e-08!41;UBERON:0001890!6.07e-08!41;UBERON:0006240!6.07e-08!41;UBERON:0007023!7.54e-08!115;UBERON:0003080!1.48e-07!42;UBERON:0000479!9.71e-07!787 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;4.65e-13;4!UBERON:0010133;4.65e-13;4!UBERON:0006947;6.16e-10;3!UBERON:0004054;6.16e-10;3!UBERON:0001737;1.24e-08;9!UBERON:0001557;1.24e-08;9!UBERON:0001905;1.48e-07;2!UBERON:0002757;1.48e-07;2!UBERON:0010134;1.48e-07;2!UBERON:0005408;1.48e-07;2!UBERON:0001899;1.48e-07;2!UBERON:0005904;1.48e-07;4!UBERON:0001894;1.79e-07;7!UBERON:0000007;3.57e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.67e-13,4;UBERON:0010133,1.67e-13,4;UBERON:0006947,1.13e-09,3;UBERON:0004054,1.13e-09,3;UBERON:0001737,2.93e-08,9;UBERON:0001894,1.02e-07,7;UBERON:0006222,1.02e-07,7;UBERON:0001905,1.20e-07,2;UBERON:0002757,1.20e-07,2;UBERON:0010134,1.20e-07,2;UBERON:0005408,1.20e-07,2;UBERON:0001899,1.20e-07,2;UBERON:0000007,1.56e-07,2;UBERON:0005904,2.31e-07,4 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,1.88072832886853,7.72837165253853,3.55873505189499,3.01302335027527,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0.426507697462265,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.756278537312543,0.221729397462564,0.43917392846563,0.261958150995425,0,0.370784442784429,3.8945687238562,3.83085422058388,1.72845348674525,0,0,0,0.596287222100115,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,1.07159673940896,0.673588117878509,0.450445921933289,1.53316637465883,0,0.366403487860815,0,0,0,0,0.25326102332916,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0.605429710579726,0,0.70296429550139,0,0,0,0.117434498643765,0.485618833104395,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0.438977620880838,0,0,0,0.179389635688862,0.213557388818567,0.423863802319124,0.600182192168805,0.206105058476878,0.257640540045629,0.18611685633159,0,0.0974370051611986,1.00973509697646,0.552299391853796,0.80823028409406,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,1.0647612003586,2.02301628093722,0.723033089650446,0.55146986366197,0.871517776369625,1.42362371466658,1.07865046528132,0.98110732562673,1.15424147083917,1.4763109092493,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0.277765335475589,0.651616610620649,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0,0.290633938513962,0,0.492663237895943,0.088048434013226,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0,0,1.27047312111232,1.30139853857622,0.773288812777695,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0.368323955743585,0.574072240823034,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.824328093181778,0.54941678891006,0.165018999841176,0,0,0,0.290012154876366,0.462145851343933,0.15350367472613,0.551346289938122,2.14840489736547,0.725083469571143,0.511359764496605,0.267096106940212,1.32227932288782,0.768760269460425,1.27612712494584,0.708104465988849,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0.823611089208164,0.471249609382746,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0,0.699869440489966,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0.962479855263359,0.245040215981032,1.30062222588003,1.44269212976445,0.924843963529383,0,0.798317485731266,0.191505370132367,1.2700414963433,0,0.280797178113459,0,0.313359791546046,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0.439524537815682,2.91265252198832,0,0,0,0,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0.219385397153973,0.762569244632931,0,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0.317873157960757,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.337005664903385,1.60515529459758,0.234264445725339,0,0.391329237864179,0,1.18375320854817,0,1.22429104652196,0.63186579628488,4.20905574360579,0.207376382794494,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,1.04836000945218,0,2.51566461351621,3.65446585430928,2.46346371159628,0.484945082442097,2.38291542067051,0,0,0,0.316553979779393,0,0,0,0,0,1.37443915399099,0,0.288109595976299,0,0,0,0,0.203996435272644,1.15580235960608,0,0.410716136675979,0,0,0,0.837847203816763,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.254019996197353,0,0.953423842781029,0,0,0,2.4747128070665,0,0.303747783290123,0,0.394028536495991,0.157363764404994,0.105600336519406,0,0,0,0,1.5256112259285,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.66116300871345,0.513260513652988,0,0.320362237703084,0.78602152549833,0.414239055347196,0,0.790446527591777,0,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0.1251909307065,0,0.665574309221114,0.124192805882767,14.1115607634955,0.124980407962107,0.606596470166591,0,0,0,0,0.149254802886874,0.701139929541673,1.10961172300523,0.568209015825267,0.754703705257725,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0.163565394255844,0.327609848846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| ||
|short_description=p16@LINC00478 | |short_description=p16@LINC00478 | ||
}} | }} |
Latest revision as of 19:38, 17 September 2015
Short description: | p16@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_LINC00478_5end |
Coexpression cluster: | C4067_medulloblastoma_Astrocyte_myeloma_embryonic_epitheloid_adrenal_Dendritic |
Association with transcript: | 0bp_to_ENST00000445461_5end |
EntrezGene: | NA |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.90e-11 | 3 |
immature conventional dendritic cell | 1.43e-09 | 5 |
common dendritic progenitor | 1.43e-09 | 5 |
oligodendrocyte | 3.09e-08 | 7 |
macroglial cell | 3.09e-08 | 7 |
astrocyte | 3.09e-08 | 7 |
oligodendrocyte precursor cell | 3.09e-08 | 7 |
neural cell | 3.17e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 1.67e-13 | 4 |
neuroendocrine gland | 1.67e-13 | 4 |
male genital duct | 1.13e-09 | 3 |
internal male genitalia | 1.13e-09 | 3 |
larynx | 2.93e-08 | 9 |
diencephalon | 1.02e-07 | 7 |
future diencephalon | 1.02e-07 | 7 |
pineal body | 1.20e-07 | 2 |
regional part of epithalamus | 1.20e-07 | 2 |
secretory circumventricular organ | 1.20e-07 | 2 |
circumventricular organ | 1.20e-07 | 2 |
epithalamus | 1.20e-07 | 2 |
pituitary gland | 1.56e-07 | 2 |
duct of male reproductive system | 2.31e-07 | 4 |