FFCP PHASE1:Hg19::chr6:31022008..31022019,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285834 | |EntrezGene=285834 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27780 | |HGNC=27780 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000426185,NR_003948,uc003nsj.1,uc010jsi.1_5end | |association_with_transcript=24bp_to_ENST00000426185,NR_003948,uc003nsj.1,uc010jsi.1_5end | ||
|cluster_id=chr6:31022008..31022019,+ | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_2_at_HCG22_5end | |description=CAGE_peak_2_at_HCG22_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.61e-26;1!UBERON:0008814;1.29e-13;2!UBERON:0010056;1.29e-13;2 | |ontology_enrichment_development_v019=UBERON:0009143;4.61e-26;1!UBERON:0008814;1.29e-13;2!UBERON:0010056;1.29e-13;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@HCG22 | |short_description=p2@HCG22 | ||
}} | }} |
Latest revision as of 19:41, 17 September 2015
Short description: | p2@HCG22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HCG22_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 24bp_to_ENST00000426185, NR_003948, uc003nsj.1, uc010jsi.1_5end |
EntrezGene: | HCG22 |
HGNC: | 27780 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 5.51e-34 | 3 |
gustatory system | 5.51e-34 | 3 |
future tongue | 5.51e-34 | 3 |
tonsil | 3.58e-26 | 1 |
mucosa-associated lymphoid tissue | 3.58e-26 | 1 |
lymphoid tissue | 3.58e-26 | 1 |
tonsillar ring | 3.58e-26 | 1 |
corpus callosum | 9.79e-26 | 1 |
central nervous system cell part cluster | 9.79e-26 | 1 |
axon tract | 9.79e-26 | 1 |
intercerebral commissure | 9.79e-26 | 1 |
dorsal telencephalic commissure | 9.79e-26 | 1 |
brain white matter | 9.79e-26 | 1 |
brain commissure | 9.79e-26 | 1 |
white matter | 9.79e-26 | 1 |
nervous system commissure | 9.79e-26 | 1 |
cerebral hemisphere white matter | 9.79e-26 | 1 |
chordate pharynx | 4.76e-23 | 10 |
pharyngeal region of foregut | 4.76e-23 | 10 |
pharynx | 4.98e-21 | 11 |
multi cell component structure | 1.37e-13 | 2 |
neuron projection bundle | 1.37e-13 | 2 |
upper respiratory tract | 1.70e-12 | 19 |
oral opening | 6.93e-11 | 22 |
esophagus | 1.30e-09 | 3 |
esophageal region | 1.30e-09 | 3 |
mouth | 2.05e-08 | 29 |
stomodeum | 2.05e-08 | 29 |
orifice | 6.79e-07 | 36 |