FFCP PHASE1:Hg19::chr13:53226852..53226859,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:53226852..53226859,+ to FFCP PHASE1:Hg19::chr13:53226852..53226859,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10910 | |EntrezGene=10910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16987 | |HGNC=16987 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000483074_5end | |||
|cluster_id=chr13:53226852..53226859,+ | |||
|description=CAGE_peak_7_at_SUGT1_5end | |||
|id=chr13:53226852..53226859,+ | |||
|ontology_enrichment_celltype=CL:0000144!1.59e-09!625;CL:0000393!2.91e-09!60;CL:0000211!2.91e-09!60;CL:0000055!4.93e-09!180;CL:0000222!1.93e-08!119;CL:0000680!2.74e-08!57;CL:0000056!2.74e-08!57;CL:0000355!2.74e-08!57;CL:0002371!3.73e-08!591;CL:0000548!8.18e-08!679;CL:0000004!8.18e-08!679;CL:0000255!8.18e-08!679;CL:0000187!1.65e-07!54;CL:0002321!2.00e-07!248;CL:0000220!3.06e-07!246;CL:0000012!3.36e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.55e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.42e-10,61;CL:0000211,2.42e-10,61;CL:0000192,2.11e-09,43;CL:0000514,2.11e-09,43;CL:0000222,2.88e-09,121;CL:0000359,4.78e-09,32;CL:0000187,1.12e-08,55;CL:0000680,1.14e-08,58;CL:0000056,1.14e-08,58;CL:0000355,1.14e-08,58;CL:0002321,1.76e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;8.26e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.15e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.13e-08!83;UBERON:0002329!3.13e-08!83;UBERON:0003077!3.13e-08!83;UBERON:0003059!3.13e-08!83;UBERON:0007282!3.13e-08!83;UBERON:0009618!3.13e-08!83;UBERON:0007285!3.13e-08!83;UBERON:0001981!1.80e-07!60;UBERON:0007500!1.80e-07!60;UBERON:0004537!1.80e-07!60;UBERON:0006965!1.80e-07!60;UBERON:0000486!2.67e-07!82;UBERON:0004290!4.84e-07!70;UBERON:0002385!5.50e-07!63;UBERON:0001015!5.50e-07!63;UBERON:0000383!5.50e-07!63;UBERON:0002204!6.36e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0010260;2.32e-12;9!UBERON:0002066;3.67e-08;5!UBERON:0002118;9.82e-08;5!UBERON:0001637;9.68e-07;42!UBERON:0003509;9.68e-07;42!UBERON:0004572;9.68e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.87e-13,78;UBERON:0007798,5.87e-13,78;UBERON:0010260,1.26e-11,9;UBERON:0000055,1.05e-10,68;UBERON:0007500,1.24e-10,59;UBERON:0001981,1.24e-10,59;UBERON:0004537,1.24e-10,59;UBERON:0006965,1.24e-10,59;UBERON:0004535,1.59e-09,109;UBERON:0001009,5.29e-09,112;UBERON:0001637,1.29e-08,42;UBERON:0003509,1.29e-08,42;UBERON:0004572,1.29e-08,42;UBERON:0007503,2.18e-08,78;UBERON:0002329,2.96e-08,71;UBERON:0003059,2.96e-08,71;UBERON:0007282,2.96e-08,71;UBERON:0004290,2.96e-08,71;UBERON:0009618,2.96e-08,71;UBERON:0003077,4.83e-08,72;UBERON:0007285,4.83e-08,72;UBERON:0002385,5.55e-08,64;UBERON:0001015,5.55e-08,64;UBERON:0000383,5.55e-08,64;UBERON:0007524,7.76e-08,73;UBERON:0000926,8.00e-08,315;UBERON:0004120,8.00e-08,315;UBERON:0006603,8.00e-08,315;UBERON:0004872,9.43e-08,83;UBERON:0001134,1.05e-07,62;UBERON:0002036,1.05e-07,62;UBERON:0003082,1.05e-07,62;UBERON:0002066,1.23e-07,5;UBERON:0002118,1.36e-07,5;UBERON:0000486,2.02e-07,83 | |||
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| ||
|short_description=p7@SUGT1 | |||
}} | }} |
Latest revision as of 19:46, 17 September 2015
Short description: | p7@SUGT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SUGT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000483074_5end |
EntrezGene: | SUGT1 |
HGNC: | 16987 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.42e-10 | 61 |
electrically active cell | 2.42e-10 | 61 |
smooth muscle cell | 2.11e-09 | 43 |
smooth muscle myoblast | 2.11e-09 | 43 |
mesodermal cell | 2.88e-09 | 121 |
vascular associated smooth muscle cell | 4.78e-09 | 32 |
muscle cell | 1.12e-08 | 55 |
muscle precursor cell | 1.14e-08 | 58 |
myoblast | 1.14e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.14e-08 | 58 |
embryonic cell | 1.76e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.15e-07 | 14 |